RNA–Protein interactions for RNA: ENST00000423941.5

HDAC6-205, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-205ENST00000423941 STAG3L3P0CL85 134 aa13.41□□□□□ -0.26
HDAC6-205ENST00000423941 LYPD1Q8N2G4 141 aa13.41□□□□□ -0.26
HDAC6-205ENST00000423941 SUN5Q8TC36 379 aa13.41□□□□□ -0.26
HDAC6-205ENST00000423941 RAB24Q969Q5 203 aa13.41□□□□□ -0.26
HDAC6-205ENST00000423941 RARRES2Q99969 163 aa13.41□□□□□ -0.26
HDAC6-205ENST00000423941 XCL2Q9UBD3 114 aa13.41□□□□□ -0.26
HDAC6-205ENST00000423941 A0A1B0GVG6 124 aa13.4□□□□□ -0.26
HDAC6-205ENST00000423941 BCL2L11O43521 198 aa13.4□□□□□ -0.26
HDAC6-205ENST00000423941 CDC34P49427 236 aaPredicted RBP13.4□□□□□ -0.26
HDAC6-205ENST00000423941 LGALSLQ3ZCW2 172 aaPredicted RBP13.4□□□□□ -0.26
HDAC6-205ENST00000423941 FAM122CQ6P4D5 195 aa13.4□□□□□ -0.26
HDAC6-205ENST00000423941 OR11H2Q8NH07 326 aa13.4□□□□□ -0.26
HDAC6-205ENST00000423941 BLNKQ8WV28 456 aa13.4□□□□□ -0.26
HDAC6-205ENST00000423941 X6R8D5 127 aa13.4□□□□□ -0.26
HDAC6-205ENST00000423941 hCG_2014768A0A024R1R8 64 aa13.39□□□□□ -0.27
HDAC6-205ENST00000423941 M0R3E3 92 aa13.39□□□□□ -0.27
HDAC6-205ENST00000423941 EIF3GO75821 320 aaKnown RBP eCLIP13.39□□□□□ -0.27
HDAC6-205ENST00000423941 ZNF705AQ6ZN79 300 aaPredicted RBP13.39□□□□□ -0.27
HDAC6-205ENST00000423941 TMUB2Q71RG4 321 aa13.39□□□□□ -0.27
HDAC6-205ENST00000423941 EXOC3-AS1Q8N2X6 119 aa13.39□□□□□ -0.27
HDAC6-205ENST00000423941 PHYHIPLQ96FC7 376 aa13.39□□□□□ -0.27
HDAC6-205ENST00000423941 NPIPB6E9PJ23 425 aa13.38□□□□□ -0.27
HDAC6-205ENST00000423941 CRXO43186 299 aaPredicted RBP13.38□□□□□ -0.27
HDAC6-205ENST00000423941 AMBPP02760 352 aa13.38□□□□□ -0.27
HDAC6-205ENST00000423941 UBE2L3P68036 154 aaKnown RBP13.38□□□□□ -0.27
HDAC6-205ENST00000423941 HIST1H1AQ02539 215 aaPredicted RBP13.38□□□□□ -0.27
HDAC6-205ENST00000423941 ICAM4Q14773 271 aa13.38□□□□□ -0.27
HDAC6-205ENST00000423941 ZNF726P1Q15940 193 aa13.38□□□□□ -0.27
HDAC6-205ENST00000423941 AKAP14Q86UN6 197 aa13.38□□□□□ -0.27
HDAC6-205ENST00000423941 HYLS1Q96M11 299 aa13.38□□□□□ -0.27
HDAC6-205ENST00000423941 AAMDCQ9H7C9 122 aa13.38□□□□□ -0.27
HDAC6-205ENST00000423941 PLA2G2EQ9NZK7 142 aa13.38□□□□□ -0.27
HDAC6-205ENST00000423941 KANTRA0A1W2PQU2 76 aa13.37□□□□□ -0.27
HDAC6-205ENST00000423941 SEC11BP0C7V7 166 aa13.37□□□□□ -0.27
HDAC6-205ENST00000423941 FXYD7P58549 80 aa13.37□□□□□ -0.27
HDAC6-205ENST00000423941 SSX7Q7RTT5 188 aa13.37□□□□□ -0.27
HDAC6-205ENST00000423941 C1orf158Q8N1D5 194 aa13.37□□□□□ -0.27
HDAC6-205ENST00000423941 ARL6IP6Q8N6S5 226 aa13.37□□□□□ -0.27
HDAC6-205ENST00000423941 Q8NAQ8 132 aa13.37□□□□□ -0.27
HDAC6-205ENST00000423941 NEU1Q99519 415 aa13.37□□□□□ -0.27
HDAC6-205ENST00000423941 ACTR3CQ9C0K3 210 aaPredicted RBP13.37□□□□□ -0.27
HDAC6-205ENST00000423941 HMGB3O15347 200 aaKnown RBP13.36□□□□□ -0.27
HDAC6-205ENST00000423941 ARL14EPLP0DKL9 152 aa13.36□□□□□ -0.27
HDAC6-205ENST00000423941 RANP62826 216 aaKnown RBP13.36□□□□□ -0.27
HDAC6-205ENST00000423941 CD300CQ08708 224 aa13.36□□□□□ -0.27
HDAC6-205ENST00000423941 OR10J6PQ8NGY7 276 aa13.36□□□□□ -0.27
HDAC6-205ENST00000423941 MUC7Q8TAX7 377 aa13.36□□□□□ -0.27
HDAC6-205ENST00000423941 IGF2BP2-AS1Q96M15 143 aa13.36□□□□□ -0.27
HDAC6-205ENST00000423941 ODF3Q96PU9 254 aa13.36□□□□□ -0.27
HDAC6-205ENST00000423941 C11orf68Q9H3H3 251 aaKnown RBP13.36□□□□□ -0.27
HDAC6-205ENST00000423941 A0A0J9YWU9 116 aa13.35□□□□□ -0.27
HDAC6-205ENST00000423941 BOLA2-SMG1P6H3BVE0 249 aa13.35□□□□□ -0.27
HDAC6-205ENST00000423941 PRB4P10163 310 aaPredicted RBP13.35□□□□□ -0.27
HDAC6-205ENST00000423941 MIFP14174 115 aa13.35□□□□□ -0.27
HDAC6-205ENST00000423941 GCHFRP30047 84 aa13.35□□□□□ -0.27
HDAC6-205ENST00000423941 C9orf47Q6ZRZ4 202 aa13.35□□□□□ -0.27
HDAC6-205ENST00000423941 STOML3Q8TAV4 291 aa13.35□□□□□ -0.27
HDAC6-205ENST00000423941 Q9H3A6 140 aa13.35□□□□□ -0.27
HDAC6-205ENST00000423941 CTXND1A0A1B0GTU2 59 aa13.34□□□□□ -0.27
HDAC6-205ENST00000423941 M0R2Z0 102 aa13.34□□□□□ -0.27
HDAC6-205ENST00000423941 CXorf1O96002 111 aa13.34□□□□□ -0.27
HDAC6-205ENST00000423941 RBMY1A1P0DJD3 496 aaKnown RBP13.34□□□□□ -0.27
HDAC6-205ENST00000423941 RBMY1CP0DJD4 496 aa13.34□□□□□ -0.27
HDAC6-205ENST00000423941 CT45A10P0DMU9 189 aa13.34□□□□□ -0.27
HDAC6-205ENST00000423941 EIF5AP63241 154 aaKnown RBP13.34□□□□□ -0.27
HDAC6-205ENST00000423941 RBMY1FQ15415 496 aaKnown RBP13.34□□□□□ -0.27
HDAC6-205ENST00000423941 SPINK13Q1W4C9 94 aa13.34□□□□□ -0.27
HDAC6-205ENST00000423941 AKR1C8PQ5T2L2 129 aa13.34□□□□□ -0.27
HDAC6-205ENST00000423941 BAP18Q8IXM2 172 aa13.34□□□□□ -0.27
HDAC6-205ENST00000423941 FAM19A4Q96LR4 140 aa13.34□□□□□ -0.27
HDAC6-205ENST00000423941 LINC00477Q96M19 166 aa13.34□□□□□ -0.27
HDAC6-205ENST00000423941 ZNF471Q9BX82 626 aaPredicted RBP13.34□□□□□ -0.27
HDAC6-205ENST00000423941 SMIM9A6NGZ8 99 aa13.33□□□□□ -0.28
HDAC6-205ENST00000423941 AGPAT4-IT1Q9H0P7 198 aa13.33□□□□□ -0.28
HDAC6-205ENST00000423941 OTORQ9NRC9 128 aa13.33□□□□□ -0.28
HDAC6-205ENST00000423941 RBAKDNA6NC62 111 aa13.32□□□□□ -0.28
HDAC6-205ENST00000423941 UMAD1C9J7I0 102 aa13.32□□□□□ -0.28
HDAC6-205ENST00000423941 C3orf84H3BNL1 204 aa13.32□□□□□ -0.28
HDAC6-205ENST00000423941 SLC25A5P05141 298 aaKnown RBP13.32□□□□□ -0.28
HDAC6-205ENST00000423941 CDKN1BP46527 198 aa13.32□□□□□ -0.28
HDAC6-205ENST00000423941 PPP1R14DQ9NXH3 145 aa13.32□□□□□ -0.28
HDAC6-205ENST00000423941 DNAH7Q8WXX0 4024 aa13.32□□□□□ -0.28
HDAC6-205ENST00000423941 IGHV4-28A0A0C4DH34 117 aa13.31□□□□□ -0.28
HDAC6-205ENST00000423941 PGPA6NDG6 321 aa13.31□□□□□ -0.28
HDAC6-205ENST00000423941 PFDN1O60925 122 aa13.31□□□□□ -0.28
HDAC6-205ENST00000423941 TPT1P13693 172 aaKnown RBP13.31□□□□□ -0.28
HDAC6-205ENST00000423941 ERCC8Q13216 396 aa13.31□□□□□ -0.28
HDAC6-205ENST00000423941 IL17DQ8TAD2 202 aa13.31□□□□□ -0.28
HDAC6-205ENST00000423941 RXFP4Q8TDU9 374 aa13.31□□□□□ -0.28
HDAC6-205ENST00000423941 TMEM167BQ9NRX6 74 aa13.31□□□□□ -0.28
HDAC6-205ENST00000423941 DIRC3C9JPN6 131 aa13.3□□□□□ -0.28
HDAC6-205ENST00000423941 NMBP08949 121 aa13.3□□□□□ -0.28
HDAC6-205ENST00000423941 TSPOP30536 169 aa13.3□□□□□ -0.28
HDAC6-205ENST00000423941 KIR3DS1Q14943 382 aa13.3□□□□□ -0.28
HDAC6-205ENST00000423941 C9orf62Q8N4C0 152 aa13.3□□□□□ -0.28
HDAC6-205ENST00000423941 VGLL1Q99990 258 aa13.3□□□□□ -0.28
HDAC6-205ENST00000423941 C20orf144Q9BQM9 153 aa13.3□□□□□ -0.28
HDAC6-205ENST00000423941 GOLT1BQ9Y3E0 138 aa13.3□□□□□ -0.28
HDAC6-205ENST00000423941 TRAV12-2A0A075B6T6 113 aa13.29□□□□□ -0.28
HDAC6-205ENST00000423941 IGKV2-40A0A087WW87 121 aaPredicted RBP13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms