RNA–Protein interactions for RNA: ENST00000421712.1

BRAT1-202, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 3

Gene BRAT1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-202ENST00000421712 FXYD5Q96DB9 178 aa11.51□□□□□ -0.57
BRAT1-202ENST00000421712 CLUHP3Q96NS8 147 aa11.51□□□□□ -0.57
BRAT1-202ENST00000421712 SLC35B3Q9H1N7 401 aa11.51□□□□□ -0.57
BRAT1-202ENST00000421712 NDUFB4O95168 129 aa11.5□□□□□ -0.57
BRAT1-202ENST00000421712 ICAM4Q14773 271 aa11.5□□□□□ -0.57
BRAT1-202ENST00000421712 AKR1C8PQ5T2L2 129 aa11.5□□□□□ -0.57
BRAT1-202ENST00000421712 PQLC2Q6ZP29 291 aa11.5□□□□□ -0.57
BRAT1-202ENST00000421712 ZNF471Q9BX82 626 aaPredicted RBP11.5□□□□□ -0.57
BRAT1-202ENST00000421712 ACTR3CQ9C0K3 210 aaPredicted RBP11.5□□□□□ -0.57
BRAT1-202ENST00000421712 CYTL1Q9NRR1 136 aa11.5□□□□□ -0.57
BRAT1-202ENST00000421712 PRELID1Q9Y255 219 aa11.5□□□□□ -0.57
BRAT1-202ENST00000421712 PRAC2D3DTV9 90 aa11.49□□□□□ -0.57
BRAT1-202ENST00000421712 RANP62826 216 aaKnown RBP11.49□□□□□ -0.57
BRAT1-202ENST00000421712 TMUB2Q71RG4 321 aa11.49□□□□□ -0.57
BRAT1-202ENST00000421712 RPP25LQ8N5L8 163 aaKnown RBP11.49□□□□□ -0.57
BRAT1-202ENST00000421712 RAB24Q969Q5 203 aa11.49□□□□□ -0.57
BRAT1-202ENST00000421712 ZNF503Q96F45 646 aa11.49□□□□□ -0.57
BRAT1-202ENST00000421712 IGHV3OR16-12A0A075B7B8 117 aa11.48□□□□□ -0.57
BRAT1-202ENST00000421712 A0A0J9YWU9 116 aa11.48□□□□□ -0.57
BRAT1-202ENST00000421712 M0R3E3 92 aa11.48□□□□□ -0.57
BRAT1-202ENST00000421712 BCL2L11O43521 198 aa11.48□□□□□ -0.57
BRAT1-202ENST00000421712 SPINK13Q1W4C9 94 aa11.48□□□□□ -0.57
BRAT1-202ENST00000421712 MRPL53Q96EL3 112 aaKnown RBP11.48□□□□□ -0.57
BRAT1-202ENST00000421712 EDA2RQ9HAV5 297 aa11.48□□□□□ -0.57
BRAT1-202ENST00000421712 A0A1B0GVG6 124 aa11.47□□□□□ -0.57
BRAT1-202ENST00000421712 ARL14EPLP0DKL9 152 aa11.47□□□□□ -0.57
BRAT1-202ENST00000421712 CSN1S1P47710 185 aa11.47□□□□□ -0.57
BRAT1-202ENST00000421712 EIF5AP63241 154 aaKnown RBP11.47□□□□□ -0.57
BRAT1-202ENST00000421712 IQCF2Q8IXL9 164 aa11.47□□□□□ -0.57
BRAT1-202ENST00000421712 PHYHIPLQ96FC7 376 aa11.47□□□□□ -0.57
BRAT1-202ENST00000421712 M0R2Z0 102 aa11.46□□□□□ -0.57
BRAT1-202ENST00000421712 C1QBP02746 253 aa11.46□□□□□ -0.57
BRAT1-202ENST00000421712 AMBPP02760 352 aa11.46□□□□□ -0.57
BRAT1-202ENST00000421712 AMTNQ6UX39 209 aa11.46□□□□□ -0.57
BRAT1-202ENST00000421712 CSNK1G2-AS1Q8NCQ2 148 aa11.46□□□□□ -0.57
BRAT1-202ENST00000421712 HYLS1Q96M11 299 aa11.46□□□□□ -0.57
BRAT1-202ENST00000421712 TMEM208Q9BTX3 173 aa11.46□□□□□ -0.57
BRAT1-202ENST00000421712 Q9H3A6 140 aa11.46□□□□□ -0.57
BRAT1-202ENST00000421712 GOLT1BQ9Y3E0 138 aa11.46□□□□□ -0.57
BRAT1-202ENST00000421712 TENM3Q9P273 2699 aa11.45□□□□□ -0.58
BRAT1-202ENST00000421712 A8MTW9 85 aa11.45□□□□□ -0.58
BRAT1-202ENST00000421712 BOLA2-SMG1P6H3BVE0 249 aa11.45□□□□□ -0.58
BRAT1-202ENST00000421712 DEFB4AO15263 64 aa11.45□□□□□ -0.58
BRAT1-202ENST00000421712 CXorf1O96002 111 aa11.45□□□□□ -0.58
BRAT1-202ENST00000421712 STAG3L2P0CL84 134 aa11.45□□□□□ -0.58
BRAT1-202ENST00000421712 STAG3L3P0CL85 134 aa11.45□□□□□ -0.58
BRAT1-202ENST00000421712 GCHFRP30047 84 aa11.45□□□□□ -0.58
BRAT1-202ENST00000421712 FAM74A1Q5RGS3 127 aa11.45□□□□□ -0.58
BRAT1-202ENST00000421712 LYPD1Q8N2G4 141 aa11.45□□□□□ -0.58
BRAT1-202ENST00000421712 MUC7Q8TAX7 377 aa11.45□□□□□ -0.58
BRAT1-202ENST00000421712 TRAV12-2A0A075B6T6 113 aa11.44□□□□□ -0.58
BRAT1-202ENST00000421712 CTXND1A0A1B0GTU2 59 aa11.44□□□□□ -0.58
BRAT1-202ENST00000421712 PGPA6NDG6 321 aa11.44□□□□□ -0.58
BRAT1-202ENST00000421712 MIFP14174 115 aa11.44□□□□□ -0.58
BRAT1-202ENST00000421712 ERCC8Q13216 396 aa11.44□□□□□ -0.58
BRAT1-202ENST00000421712 LGALSLQ3ZCW2 172 aaPredicted RBP11.44□□□□□ -0.58
BRAT1-202ENST00000421712 CMTM2Q8TAZ6 248 aa11.44□□□□□ -0.58
BRAT1-202ENST00000421712 IGF2BP2-AS1Q96M15 143 aa11.44□□□□□ -0.58
BRAT1-202ENST00000421712 IGKV2-40A0A087WW87 121 aaPredicted RBP11.43□□□□□ -0.58
BRAT1-202ENST00000421712 ZNF705EA8MWA4 302 aaPredicted RBP11.43□□□□□ -0.58
BRAT1-202ENST00000421712 J3KRW8 73 aa11.43□□□□□ -0.58
BRAT1-202ENST00000421712 INSP01308 110 aa11.43□□□□□ -0.58
BRAT1-202ENST00000421712 IGKV2D-40P01614 121 aaPredicted RBP11.43□□□□□ -0.58
BRAT1-202ENST00000421712 TPT1P13693 172 aaKnown RBP11.43□□□□□ -0.58
BRAT1-202ENST00000421712 TSPOP30536 169 aa11.43□□□□□ -0.58
BRAT1-202ENST00000421712 CDKN1BP46527 198 aa11.43□□□□□ -0.58
BRAT1-202ENST00000421712 ZFP69Q49AA0 526 aa11.43□□□□□ -0.58
BRAT1-202ENST00000421712 BAP18Q8IXM2 172 aa11.43□□□□□ -0.58
BRAT1-202ENST00000421712 IL17DQ8TAD2 202 aa11.43□□□□□ -0.58
BRAT1-202ENST00000421712 OTORQ9NRC9 128 aa11.43□□□□□ -0.58
BRAT1-202ENST00000421712 TMEM167BQ9NRX6 74 aa11.43□□□□□ -0.58
BRAT1-202ENST00000421712 RPH3ALQ9UNE2 315 aa11.43□□□□□ -0.58
BRAT1-202ENST00000421712 IGHV4-28A0A0C4DH34 117 aa11.42□□□□□ -0.58
BRAT1-202ENST00000421712 NPIPB6E9PJ23 425 aa11.42□□□□□ -0.58
BRAT1-202ENST00000421712 SEC11BP0C7V7 166 aa11.42□□□□□ -0.58
BRAT1-202ENST00000421712 LEPP41159 167 aa11.42□□□□□ -0.58
BRAT1-202ENST00000421712 FGF8P55075 233 aaPredicted RBP11.42□□□□□ -0.58
BRAT1-202ENST00000421712 CD300CQ08708 224 aa11.42□□□□□ -0.58
BRAT1-202ENST00000421712 TMEM78Q5T7P6 136 aa11.42□□□□□ -0.58
BRAT1-202ENST00000421712 ZFAND6Q6FIF0 208 aa11.42□□□□□ -0.58
BRAT1-202ENST00000421712 SSX7Q7RTT5 188 aa11.42□□□□□ -0.58
BRAT1-202ENST00000421712 RXFP4Q8TDU9 374 aa11.42□□□□□ -0.58
BRAT1-202ENST00000421712 LINC00477Q96M19 166 aa11.42□□□□□ -0.58
BRAT1-202ENST00000421712 X6R8D5 127 aa11.42□□□□□ -0.58
BRAT1-202ENST00000421712 C3orf84H3BNL1 204 aa11.41□□□□□ -0.58
BRAT1-202ENST00000421712 HBE1P02100 147 aa11.41□□□□□ -0.58
BRAT1-202ENST00000421712 CT45A10P0DMU9 189 aa11.41□□□□□ -0.58
BRAT1-202ENST00000421712 ZNF726P1Q15940 193 aa11.41□□□□□ -0.58
BRAT1-202ENST00000421712 ZNF705AQ6ZN79 300 aaPredicted RBP11.41□□□□□ -0.58
BRAT1-202ENST00000421712 C1orf158Q8N1D5 194 aa11.41□□□□□ -0.58
BRAT1-202ENST00000421712 Q8NAQ8 132 aa11.41□□□□□ -0.58
BRAT1-202ENST00000421712 TMED6Q8WW62 240 aa11.41□□□□□ -0.58
BRAT1-202ENST00000421712 LINC01587Q99440 93 aa11.41□□□□□ -0.58
BRAT1-202ENST00000421712 AGPAT4-IT1Q9H0P7 198 aa11.41□□□□□ -0.58
BRAT1-202ENST00000421712 MAP1LC3B2A6NCE7 125 aa11.4□□□□□ -0.58
BRAT1-202ENST00000421712 SMIM9A6NGZ8 99 aa11.4□□□□□ -0.58
BRAT1-202ENST00000421712 UMAD1C9J7I0 102 aa11.4□□□□□ -0.58
BRAT1-202ENST00000421712 CRXO43186 299 aaPredicted RBP11.4□□□□□ -0.58
BRAT1-202ENST00000421712 SLC25A5P05141 298 aaKnown RBP11.4□□□□□ -0.58
BRAT1-202ENST00000421712 RBMY1A1P0DJD3 496 aaKnown RBP11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms