RNA–Protein interactions for RNA: ENST00000420706.1

TMEM53-206, Transcript of transmembrane protein 53, humanhuman

TSL 2

Gene TMEM53, Length 415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-206ENST00000420706 TAGLN2P37802 199 aaKnown RBP9.29□□□□□ -0.92
TMEM53-206ENST00000420706 ODF3L2Q3SX64 289 aa9.29□□□□□ -0.92
TMEM53-206ENST00000420706 RXFP4Q8TDU9 374 aa9.29□□□□□ -0.92
TMEM53-206ENST00000420706 MRPL53Q96EL3 112 aaKnown RBP9.29□□□□□ -0.92
TMEM53-206ENST00000420706 FAM110AQ9BQ89 295 aa9.29□□□□□ -0.92
TMEM53-206ENST00000420706 TXNDC17Q9BRA2 123 aa9.29□□□□□ -0.92
TMEM53-206ENST00000420706 ZMAT5Q9UDW3 170 aaKnown RBP9.29□□□□□ -0.92
TMEM53-206ENST00000420706 SORL1Q92673 2214 aa9.28□□□□□ -0.92
TMEM53-206ENST00000420706 C11orf94C9JXX5 98 aa9.28□□□□□ -0.92
TMEM53-206ENST00000420706 PRAC2D3DTV9 90 aa9.28□□□□□ -0.92
TMEM53-206ENST00000420706 CSN1S1P47710 185 aa9.28□□□□□ -0.92
TMEM53-206ENST00000420706 DEFB1P60022 68 aa9.28□□□□□ -0.92
TMEM53-206ENST00000420706 CD81P60033 236 aa9.28□□□□□ -0.92
TMEM53-206ENST00000420706 ZNF506Q5JVG8 444 aa9.28□□□□□ -0.92
TMEM53-206ENST00000420706 ARL6IP6Q8N6S5 226 aa9.28□□□□□ -0.92
TMEM53-206ENST00000420706 C5orf17Q8NAS9 161 aa9.28□□□□□ -0.92
TMEM53-206ENST00000420706 ZNF738Q8NE65 137 aa9.28□□□□□ -0.92
TMEM53-206ENST00000420706 CMTM2Q8TAZ6 248 aa9.28□□□□□ -0.92
TMEM53-206ENST00000420706 RPUSD4Q96CM3 377 aaKnown RBP9.28□□□□□ -0.92
TMEM53-206ENST00000420706 VAX2Q9UIW0 290 aa9.28□□□□□ -0.92
TMEM53-206ENST00000420706 EPDR1Q9UM22 224 aa9.28□□□□□ -0.92
TMEM53-206ENST00000420706 NOTCH3Q9UM47 2321 aa9.27□□□□□ -0.92
TMEM53-206ENST00000420706 OR11H12B2RN74 326 aa9.27□□□□□ -0.93
TMEM53-206ENST00000420706 DIRC3C9JPN6 131 aa9.27□□□□□ -0.93
TMEM53-206ENST00000420706 GNG5P63218 68 aa9.27□□□□□ -0.93
TMEM53-206ENST00000420706 MEF2BQ02080 365 aaPredicted RBP9.27□□□□□ -0.93
TMEM53-206ENST00000420706 ZNF124Q15973 351 aa9.27□□□□□ -0.93
TMEM53-206ENST00000420706 TOR2AQ5JU69 321 aa9.27□□□□□ -0.93
TMEM53-206ENST00000420706 APRG1Q8IVJ8 170 aa9.27□□□□□ -0.93
TMEM53-206ENST00000420706 Q8N1Y9 231 aa9.27□□□□□ -0.93
TMEM53-206ENST00000420706 PRR25Q96S07 402 aa9.27□□□□□ -0.93
TMEM53-206ENST00000420706 EIF5A2Q9GZV4 153 aaKnown RBP9.27□□□□□ -0.93
TMEM53-206ENST00000420706 MED9Q9NWA0 146 aa9.27□□□□□ -0.93
TMEM53-206ENST00000420706 VWFP04275 2813 aa9.26□□□□□ -0.93
TMEM53-206ENST00000420706 LINC00862A6NCI5 91 aa9.26□□□□□ -0.93
TMEM53-206ENST00000420706 F6UB75 175 aa9.26□□□□□ -0.93
TMEM53-206ENST00000420706 TCRAP04437 139 aa9.26□□□□□ -0.93
TMEM53-206ENST00000420706 SRSF3P84103 164 aaKnown RBP9.26□□□□□ -0.93
TMEM53-206ENST00000420706 GDF5OSQ5U4N7 250 aa9.26□□□□□ -0.93
TMEM53-206ENST00000420706 FOXI2Q6ZQN5 318 aa9.26□□□□□ -0.93
TMEM53-206ENST00000420706 GTSCR1Q86UQ5 136 aa9.26□□□□□ -0.93
TMEM53-206ENST00000420706 OR8A1Q8NGG7 326 aa9.26□□□□□ -0.93
TMEM53-206ENST00000420706 SAV1Q9H4B6 383 aaPredicted RBP9.26□□□□□ -0.93
TMEM53-206ENST00000420706 RPH3ALQ9UNE2 315 aa9.26□□□□□ -0.93
TMEM53-206ENST00000420706 A0A0J9YX75 114 aa9.25□□□□□ -0.93
TMEM53-206ENST00000420706 RAB19A4D1S5 217 aa9.25□□□□□ -0.93
TMEM53-206ENST00000420706 KNCNA6PVL3 124 aa9.25□□□□□ -0.93
TMEM53-206ENST00000420706 F6UZH7 168 aa9.25□□□□□ -0.93
TMEM53-206ENST00000420706 ZNF705DP0CH99 300 aaPredicted RBP9.25□□□□□ -0.93
TMEM53-206ENST00000420706 ZNF705BP0CI00 300 aaPredicted RBP9.25□□□□□ -0.93
TMEM53-206ENST00000420706 KPRPQ5T749 579 aaPredicted RBP9.25□□□□□ -0.93
TMEM53-206ENST00000420706 EBLN2Q6P2I7 272 aa9.25□□□□□ -0.93
TMEM53-206ENST00000420706 HIST1H2BAQ96A08 127 aa9.25□□□□□ -0.93
TMEM53-206ENST00000420706 CITED4Q96RK1 184 aa9.25□□□□□ -0.93
TMEM53-206ENST00000420706 TCEAL7Q9BRU2 100 aa9.25□□□□□ -0.93
TMEM53-206ENST00000420706 WFDC10AQ9H1F0 79 aa9.25□□□□□ -0.93
TMEM53-206ENST00000420706 IGKV2-40A0A087WW87 121 aaPredicted RBP9.24□□□□□ -0.93
TMEM53-206ENST00000420706 SCO2A0A1W2PP80 73 aa9.24□□□□□ -0.93
TMEM53-206ENST00000420706 RBAKDNA6NC62 111 aa9.24□□□□□ -0.93
TMEM53-206ENST00000420706 PEX7O00628 323 aa9.24□□□□□ -0.93
TMEM53-206ENST00000420706 NDUFS6O75380 124 aaKnown RBP9.24□□□□□ -0.93
TMEM53-206ENST00000420706 IGKV2D-40P01614 121 aaPredicted RBP9.24□□□□□ -0.93
TMEM53-206ENST00000420706 SRP19P09132 144 aaKnown RBP9.24□□□□□ -0.93
TMEM53-206ENST00000420706 ERCC8Q13216 396 aa9.24□□□□□ -0.93
TMEM53-206ENST00000420706 PEA15Q15121 130 aa9.24□□□□□ -0.93
TMEM53-206ENST00000420706 GOLT1AQ6ZVE7 132 aa9.24□□□□□ -0.93
TMEM53-206ENST00000420706 DEFB125Q8N687 156 aa9.24□□□□□ -0.93
TMEM53-206ENST00000420706 VGLL1Q99990 258 aa9.24□□□□□ -0.93
TMEM53-206ENST00000420706 ATG101Q9BSB4 218 aa9.24□□□□□ -0.93
TMEM53-206ENST00000420706 AGPAT4-IT1Q9H0P7 198 aa9.24□□□□□ -0.93
TMEM53-206ENST00000420706 SERTM2A0A1B0GWG4 89 aa9.23□□□□□ -0.93
TMEM53-206ENST00000420706 C9JQL5 133 aa9.23□□□□□ -0.93
TMEM53-206ENST00000420706 H3BMM0 161 aa9.23□□□□□ -0.93
TMEM53-206ENST00000420706 PDE6DO43924 150 aa9.23□□□□□ -0.93
TMEM53-206ENST00000420706 DUSP14O95147 198 aaKnown RBP9.23□□□□□ -0.93
TMEM53-206ENST00000420706 HLA-DRB4P13762 266 aa9.23□□□□□ -0.93
TMEM53-206ENST00000420706 HIST1H1AQ02539 215 aaPredicted RBP9.23□□□□□ -0.93
TMEM53-206ENST00000420706 ACTL10Q5JWF8 245 aa9.23□□□□□ -0.93
TMEM53-206ENST00000420706 C9orf47Q6ZRZ4 202 aa9.23□□□□□ -0.93
TMEM53-206ENST00000420706 CYB561D1Q8N8Q1 229 aa9.23□□□□□ -0.93
TMEM53-206ENST00000420706 OR10J6PQ8NGY7 276 aa9.23□□□□□ -0.93
TMEM53-206ENST00000420706 C2CD4CQ8TF44 421 aa9.23□□□□□ -0.93
TMEM53-206ENST00000420706 C11orf52Q96A22 123 aa9.23□□□□□ -0.93
TMEM53-206ENST00000420706 LINC00477Q96M19 166 aa9.23□□□□□ -0.93
TMEM53-206ENST00000420706 LINC00479Q96M42 142 aa9.23□□□□□ -0.93
TMEM53-206ENST00000420706 SMDT1Q9H4I9 107 aa9.23□□□□□ -0.93
TMEM53-206ENST00000420706 HLA-DRB4X5D2U9 266 aa9.23□□□□□ -0.93
TMEM53-206ENST00000420706 AGRNO00468 2067 aa9.22□□□□□ -0.93
TMEM53-206ENST00000420706 TRAV34A0A0B4J273 112 aa9.22□□□□□ -0.93
TMEM53-206ENST00000420706 NPIPB6E9PJ23 425 aa9.22□□□□□ -0.93
TMEM53-206ENST00000420706 K7EQM0 130 aa9.22□□□□□ -0.93
TMEM53-206ENST00000420706 IGLV2-11P01706 119 aa9.22□□□□□ -0.93
TMEM53-206ENST00000420706 AKR1C3P42330 323 aa9.22□□□□□ -0.93
TMEM53-206ENST00000420706 CNN1P51911 297 aaKnown RBP9.22□□□□□ -0.93
TMEM53-206ENST00000420706 COMMD7Q86VX2 200 aa9.22□□□□□ -0.93
TMEM53-206ENST00000420706 SGK494Q96LW2 274 aa9.22□□□□□ -0.93
TMEM53-206ENST00000420706 KLF12Q9Y4X4 402 aa9.22□□□□□ -0.93
TMEM53-206ENST00000420706 TRAV8-1A0A0A6YYK1 113 aa9.21□□□□□ -0.94
TMEM53-206ENST00000420706 A8MTW9 85 aa9.21□□□□□ -0.94
TMEM53-206ENST00000420706 TMEM250H0YL14 139 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms