RNA–Protein interactions for RNA: ENST00000420453.1

LINC00993-201, long intergenic non-protein coding RNA 993, humanhuman

BASIC

Gene LINC00993, Length 540 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00993-201ENST00000420453 C4orf3Q8WVX3 66 aa3.74□□□□□ -1.81
LINC00993-201ENST00000420453 HIST1H2BHQ93079 126 aa3.74□□□□□ -1.81
LINC00993-201ENST00000420453 EEF1AKMT3Q96AZ1 226 aa3.74□□□□□ -1.81
LINC00993-201ENST00000420453 BSCL2Q96G97 398 aaPredicted RBP3.74□□□□□ -1.81
LINC00993-201ENST00000420453 PACRGQ96M98 296 aaPredicted RBP3.74□□□□□ -1.81
LINC00993-201ENST00000420453 C17orf77Q96MU5 243 aa3.74□□□□□ -1.81
LINC00993-201ENST00000420453 TRGV9Q99603 122 aa3.74□□□□□ -1.81
LINC00993-201ENST00000420453 HIST1H2BNQ99877 126 aa3.74□□□□□ -1.81
LINC00993-201ENST00000420453 HIST1H2BMQ99879 126 aa3.74□□□□□ -1.81
LINC00993-201ENST00000420453 WDR61Q9GZS3 305 aaKnown RBP3.74□□□□□ -1.81
LINC00993-201ENST00000420453 SH3BGRL3Q9H299 93 aa3.74□□□□□ -1.81
LINC00993-201ENST00000420453 PRO1933Q9H354 126 aa3.74□□□□□ -1.81
LINC00993-201ENST00000420453 KCNIP2Q9NS61 270 aa3.74□□□□□ -1.81
LINC00993-201ENST00000420453 ZNF355PQ9NSJ1 428 aa3.74□□□□□ -1.81
LINC00993-201ENST00000420453 AKAP9Q99996 3911 aa3.74□□□□□ -1.81
LINC00993-201ENST00000420453 MTORP42345 2549 aa3.74□□□□□ -1.81
LINC00993-201ENST00000420453 SETXQ7Z333 2677 aaKnown RBP3.73□□□□□ -1.81
LINC00993-201ENST00000420453 NSD1Q96L73 2696 aaPredicted RBP3.73□□□□□ -1.81
LINC00993-201ENST00000420453 IGKV1OR2-108A0A075B7D4 117 aa3.73□□□□□ -1.81
LINC00993-201ENST00000420453 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP3.73□□□□□ -1.81
LINC00993-201ENST00000420453 TGIF2-C20orf24A0A0A6YYL0 155 aa3.73□□□□□ -1.81
LINC00993-201ENST00000420453 UBE2L5PA0A1B0GUS4 154 aa3.73□□□□□ -1.81
LINC00993-201ENST00000420453 A0A1B0GV50 99 aa3.73□□□□□ -1.81
LINC00993-201ENST00000420453 ZNF727A8MUV8 499 aa3.73□□□□□ -1.81
LINC00993-201ENST00000420453 C17orf112F2Z3M2 114 aa3.73□□□□□ -1.81
LINC00993-201ENST00000420453 GNG7O60262 68 aa3.73□□□□□ -1.81
LINC00993-201ENST00000420453 IGKV1-17P01599 117 aa3.73□□□□□ -1.81
LINC00993-201ENST00000420453 TRGC2P03986 189 aa3.73□□□□□ -1.81
LINC00993-201ENST00000420453 LGALS1P09382 135 aaKnown RBP3.73□□□□□ -1.81
LINC00993-201ENST00000420453 TRGC1P0CF51 173 aa3.73□□□□□ -1.81
LINC00993-201ENST00000420453 OR10J1P30954 320 aa3.73□□□□□ -1.81
LINC00993-201ENST00000420453 RPL29P47914 159 aaKnown RBP3.73□□□□□ -1.81
LINC00993-201ENST00000420453 YPEL3P61236 119 aaPredicted RBP3.73□□□□□ -1.81
LINC00993-201ENST00000420453 GAGE2BQ13066 116 aa3.73□□□□□ -1.81
LINC00993-201ENST00000420453 HAGHQ16775 308 aa3.73□□□□□ -1.81
LINC00993-201ENST00000420453 GAGE2EQ4V326 116 aa3.73□□□□□ -1.81
LINC00993-201ENST00000420453 PDZD11Q5EBL8 140 aa3.73□□□□□ -1.81
LINC00993-201ENST00000420453 TCTEX1D4Q5JR98 221 aa3.73□□□□□ -1.81
LINC00993-201ENST00000420453 GAGE2AQ6NT46 116 aa3.73□□□□□ -1.81
LINC00993-201ENST00000420453 C10orf99Q6UWK7 81 aa3.73□□□□□ -1.81
LINC00993-201ENST00000420453 SMIM29Q86T20 159 aa3.73□□□□□ -1.81
LINC00993-201ENST00000420453 TMEM183AQ8IXX5 376 aa3.73□□□□□ -1.81
LINC00993-201ENST00000420453 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.73□□□□□ -1.81
LINC00993-201ENST00000420453 OR10G4Q8NGN3 311 aa3.73□□□□□ -1.81
LINC00993-201ENST00000420453 SCGB1C1Q8TD33 95 aa3.73□□□□□ -1.81
LINC00993-201ENST00000420453 TMEM158Q8WZ71 300 aa3.73□□□□□ -1.81
LINC00993-201ENST00000420453 TAF15Q92804 592 aaKnown RBP eCLIP3.73□□□□□ -1.81
LINC00993-201ENST00000420453 GNPNAT1Q96EK6 184 aaPredicted RBP3.73□□□□□ -1.81
LINC00993-201ENST00000420453 ACY3Q96HD9 319 aa3.73□□□□□ -1.81
LINC00993-201ENST00000420453 FAM210BQ96KR6 192 aa3.73□□□□□ -1.81
LINC00993-201ENST00000420453 MS4A10Q96PG2 267 aa3.73□□□□□ -1.81
LINC00993-201ENST00000420453 RARRES2Q99969 163 aa3.73□□□□□ -1.81
LINC00993-201ENST00000420453 PSMG3Q9BT73 122 aaPredicted RBP3.73□□□□□ -1.81
LINC00993-201ENST00000420453 NDUFAF3Q9BU61 184 aa3.73□□□□□ -1.81
LINC00993-201ENST00000420453 NPCDR1Q9BY65 106 aa3.73□□□□□ -1.81
LINC00993-201ENST00000420453 GPR61Q9BZJ8 451 aa3.73□□□□□ -1.81
LINC00993-201ENST00000420453 WFDC1Q9HC57 220 aa3.73□□□□□ -1.81
LINC00993-201ENST00000420453 MRPL36Q9P0J6 103 aaKnown RBP3.73□□□□□ -1.81
LINC00993-201ENST00000420453 GAGE2DQ9UEU5 116 aa3.73□□□□□ -1.81
LINC00993-201ENST00000420453 TIMM9Q9Y5J7 89 aa3.73□□□□□ -1.81
LINC00993-201ENST00000420453 TSSC4Q9Y5U2 329 aaPredicted RBP3.73□□□□□ -1.81
LINC00993-201ENST00000420453 URGCP-MRPS24S4R325 110 aa3.73□□□□□ -1.81
LINC00993-201ENST00000420453 CELSR1Q9NYQ6 3014 aa3.72□□□□□ -1.81
LINC00993-201ENST00000420453 IGKV1D-37A0A075B6S9 117 aa3.72□□□□□ -1.81
LINC00993-201ENST00000420453 TCRBV4S1A1TA0A5B7 111 aa3.72□□□□□ -1.81
LINC00993-201ENST00000420453 ZFP92A6NM28 416 aa3.72□□□□□ -1.81
LINC00993-201ENST00000420453 GCGP01275 180 aa3.72□□□□□ -1.81
LINC00993-201ENST00000420453 IFNA1P01562 189 aa3.72□□□□□ -1.81
LINC00993-201ENST00000420453 CTSGP08311 255 aa3.72□□□□□ -1.81
LINC00993-201ENST00000420453 VPREB1P12018 145 aa3.72□□□□□ -1.81
LINC00993-201ENST00000420453 MT3P25713 68 aa3.72□□□□□ -1.81
LINC00993-201ENST00000420453 ATP6V0CP27449 155 aa3.72□□□□□ -1.81
LINC00993-201ENST00000420453 GPR183P32249 361 aa3.72□□□□□ -1.81
LINC00993-201ENST00000420453 FHITP49789 147 aa3.72□□□□□ -1.81
LINC00993-201ENST00000420453 LINC01547P58512 204 aaPredicted RBP3.72□□□□□ -1.81
LINC00993-201ENST00000420453 PLP1P60201 277 aa3.72□□□□□ -1.81
LINC00993-201ENST00000420453 NUTF2P61970 127 aaKnown RBP3.72□□□□□ -1.81
LINC00993-201ENST00000420453 SERF2P84101 59 aa3.72□□□□□ -1.81
LINC00993-201ENST00000420453 JOSD1Q15040 202 aaPredicted RBP3.72□□□□□ -1.81
LINC00993-201ENST00000420453 KRTAP24-1Q3LI83 254 aa3.72□□□□□ -1.81
LINC00993-201ENST00000420453 Q56UQ5 140 aa3.72□□□□□ -1.81
LINC00993-201ENST00000420453 LCE1EQ5T753 118 aa3.72□□□□□ -1.81
LINC00993-201ENST00000420453 RBPMS2Q6ZRY4 209 aaKnown RBP3.72□□□□□ -1.81
LINC00993-201ENST00000420453 CYP2G1PQ6ZSU1 146 aa3.72□□□□□ -1.81
LINC00993-201ENST00000420453 NDUFA11Q86Y39 141 aa3.72□□□□□ -1.81
LINC00993-201ENST00000420453 CYB561D1Q8N8Q1 229 aa3.72□□□□□ -1.81
LINC00993-201ENST00000420453 ZNF709Q8N972 641 aa3.72□□□□□ -1.81
LINC00993-201ENST00000420453 FRZBQ92765 325 aa3.72□□□□□ -1.81
LINC00993-201ENST00000420453 MGST2Q99735 147 aa3.72□□□□□ -1.81
LINC00993-201ENST00000420453 CITED1Q99966 193 aa3.72□□□□□ -1.81
LINC00993-201ENST00000420453 C19orf24Q9BVV8 132 aa3.72□□□□□ -1.81
LINC00993-201ENST00000420453 GGTLC1Q9BX51 225 aa3.72□□□□□ -1.81
LINC00993-201ENST00000420453 ACTR3CQ9C0K3 210 aaPredicted RBP3.72□□□□□ -1.81
LINC00993-201ENST00000420453 TMEM242Q9NWH2 141 aa3.72□□□□□ -1.81
LINC00993-201ENST00000420453 PEF1Q9UBV8 284 aaKnown RBP3.72□□□□□ -1.81
LINC00993-201ENST00000420453 MAST4O15021 2626 aa3.72□□□□□ -1.81
LINC00993-201ENST00000420453 PLXNB1O43157 2135 aa3.71□□□□□ -1.81
LINC00993-201ENST00000420453 TRBV24-1A0A075B6N3 115 aa3.71□□□□□ -1.82
LINC00993-201ENST00000420453 IGHV3-21A0A0B4J1V1 117 aa3.71□□□□□ -1.82
LINC00993-201ENST00000420453 OR2T8A6NH00 312 aa3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms