RNA–Protein interactions for RNA: ENST00000420013.5

MCF2L-212, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 4

Gene MCF2L, Length 566 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-212ENST00000420013 ATG101Q9BSB4 218 aa14.35□□□□□ -0.11
MCF2L-212ENST00000420013 KRTAP17-1Q9BYP8 105 aa14.35□□□□□ -0.11
MCF2L-212ENST00000420013 DNAJC4Q9NNZ3 241 aa14.35□□□□□ -0.11
MCF2L-212ENST00000420013 UBE2L5PA0A1B0GUS4 154 aa14.34□□□□□ -0.11
MCF2L-212ENST00000420013 CBY3A6NI87 242 aa14.34□□□□□ -0.11
MCF2L-212ENST00000420013 AZU1P20160 251 aa14.34□□□□□ -0.11
MCF2L-212ENST00000420013 S100A11P31949 105 aa14.34□□□□□ -0.11
MCF2L-212ENST00000420013 SULT1A1P50225 295 aa14.34□□□□□ -0.11
MCF2L-212ENST00000420013 RAB32Q13637 225 aa14.34□□□□□ -0.11
MCF2L-212ENST00000420013 GUK1Q16774 197 aa14.34□□□□□ -0.11
MCF2L-212ENST00000420013 OR10J6PQ8NGY7 276 aa14.34□□□□□ -0.11
MCF2L-212ENST00000420013 RNASE8Q8TDE3 154 aaKnown RBP14.34□□□□□ -0.11
MCF2L-212ENST00000420013 PFDN5Q99471 154 aa14.34□□□□□ -0.11
MCF2L-212ENST00000420013 LYRM2Q9NU23 88 aaPredicted RBP14.34□□□□□ -0.11
MCF2L-212ENST00000420013 DYNC1H1Q14204 4646 aaKnown RBP14.33□□□□□ -0.12
MCF2L-212ENST00000420013 F5H768 121 aa14.33□□□□□ -0.12
MCF2L-212ENST00000420013 PRM2P04554 102 aa14.33□□□□□ -0.12
MCF2L-212ENST00000420013 IGLC2P0DOY2 106 aa14.33□□□□□ -0.12
MCF2L-212ENST00000420013 PRB4P10163 310 aaPredicted RBP14.33□□□□□ -0.12
MCF2L-212ENST00000420013 HTN1P15515 57 aa14.33□□□□□ -0.12
MCF2L-212ENST00000420013 OPCMLQ14982 345 aa14.33□□□□□ -0.12
MCF2L-212ENST00000420013 MIC13Q5XKP0 118 aa14.33□□□□□ -0.12
MCF2L-212ENST00000420013 TMEM37Q8WXS4 190 aa14.33□□□□□ -0.12
MCF2L-212ENST00000420013 ODF3Q96PU9 254 aa14.33□□□□□ -0.12
MCF2L-212ENST00000420013 H3BTX0 84 aa14.32□□□□□ -0.12
MCF2L-212ENST00000420013 C1orf134Q5TEV5 83 aa14.32□□□□□ -0.12
MCF2L-212ENST00000420013 C11orf1Q9H5F2 150 aa14.32□□□□□ -0.12
MCF2L-212ENST00000420013 WDR83OSQ9Y284 106 aa14.32□□□□□ -0.12
MCF2L-212ENST00000420013 SLC17A3O00476 420 aa14.31□□□□□ -0.12
MCF2L-212ENST00000420013 ZNF253O75346 499 aa14.31□□□□□ -0.12
MCF2L-212ENST00000420013 RLN2P04090 185 aa14.31□□□□□ -0.12
MCF2L-212ENST00000420013 FGF7P21781 194 aa14.31□□□□□ -0.12
MCF2L-212ENST00000420013 VWC2Q2TAL6 325 aa14.31□□□□□ -0.12
MCF2L-212ENST00000420013 MORN5Q5VZ52 161 aa14.31□□□□□ -0.12
MCF2L-212ENST00000420013 TMEM252Q8N6L7 170 aa14.31□□□□□ -0.12
MCF2L-212ENST00000420013 IGSF23A1L1A6 192 aa14.3□□□□□ -0.12
MCF2L-212ENST00000420013 IFITM3Q01628 133 aa14.3□□□□□ -0.12
MCF2L-212ENST00000420013 ATP6V1FQ16864 119 aa14.3□□□□□ -0.12
MCF2L-212ENST00000420013 GFI1BQ5VTD9 330 aa14.3□□□□□ -0.12
MCF2L-212ENST00000420013 MRPL53Q96EL3 112 aaKnown RBP14.3□□□□□ -0.12
MCF2L-212ENST00000420013 SAT2Q96F10 170 aaPredicted RBP14.3□□□□□ -0.12
MCF2L-212ENST00000420013 SLC39A9Q9NUM3 307 aa14.3□□□□□ -0.12
MCF2L-212ENST00000420013 RPL29P47914 159 aaKnown RBP14.29□□□□□ -0.12
MCF2L-212ENST00000420013 DEFA1P59665 94 aa14.29□□□□□ -0.12
MCF2L-212ENST00000420013 DEFA3P59666 94 aa14.29□□□□□ -0.12
MCF2L-212ENST00000420013 CCDC28AQ8IWP9 274 aa14.29□□□□□ -0.12
MCF2L-212ENST00000420013 CHAC2Q8WUX2 184 aa14.29□□□□□ -0.12
MCF2L-212ENST00000420013 TRAV5A0A0B4J249 113 aa14.28□□□□□ -0.12
MCF2L-212ENST00000420013 NPIPB6E9PJ23 425 aa14.28□□□□□ -0.12
MCF2L-212ENST00000420013 NUDT3O95989 172 aa14.28□□□□□ -0.12
MCF2L-212ENST00000420013 LEPP41159 167 aa14.28□□□□□ -0.12
MCF2L-212ENST00000420013 CCL18P55774 89 aa14.28□□□□□ -0.12
MCF2L-212ENST00000420013 LINC00612Q8N6U2 182 aa14.28□□□□□ -0.12
MCF2L-212ENST00000420013 ZNRF2Q8NHG8 242 aa14.28□□□□□ -0.12
MCF2L-212ENST00000420013 SLC25A31Q9H0C2 315 aa14.28□□□□□ -0.12
MCF2L-212ENST00000420013 NOP10Q9NPE3 64 aaKnown RBP14.28□□□□□ -0.12
MCF2L-212ENST00000420013 H3BQ15 152 aa14.27□□□□□ -0.13
MCF2L-212ENST00000420013 FCN2Q15485 313 aa14.27□□□□□ -0.13
MCF2L-212ENST00000420013 LRRC37A5PQ49AS3 106 aa14.27□□□□□ -0.13
MCF2L-212ENST00000420013 RNF141Q8WVD5 230 aa14.27□□□□□ -0.13
MCF2L-212ENST00000420013 PCLOQ9Y6V0 5065 aa14.26□□□□□ -0.13
MCF2L-212ENST00000420013 NBDYA0A0U1RRE5 68 aa14.26□□□□□ -0.13
MCF2L-212ENST00000420013 SNURFLB1AK76 121 aa14.26□□□□□ -0.13
MCF2L-212ENST00000420013 PRAC2D3DTV9 90 aa14.26□□□□□ -0.13
MCF2L-212ENST00000420013 PRAF2O60831 178 aa14.26□□□□□ -0.13
MCF2L-212ENST00000420013 MPDU1O75352 247 aa14.26□□□□□ -0.13
MCF2L-212ENST00000420013 SIX6O95475 246 aa14.26□□□□□ -0.13
MCF2L-212ENST00000420013 IL15RAQ13261 267 aa14.26□□□□□ -0.13
MCF2L-212ENST00000420013 PDE6HQ13956 83 aa14.26□□□□□ -0.13
MCF2L-212ENST00000420013 ZNF503Q96F45 646 aa14.26□□□□□ -0.13
MCF2L-212ENST00000420013 PYGO2Q9BRQ0 406 aa14.26□□□□□ -0.13
MCF2L-212ENST00000420013 MUC4Q99102 2169 aa14.26□□□□□ -0.13
MCF2L-212ENST00000420013 E5RGE8 158 aa14.25□□□□□ -0.13
MCF2L-212ENST00000420013 INMT-MINDY4F8WBC2 141 aa14.25□□□□□ -0.13
MCF2L-212ENST00000420013 CYCSP99999 105 aaKnown RBP14.25□□□□□ -0.13
MCF2L-212ENST00000420013 CLINT1Q14677 625 aa14.25□□□□□ -0.13
MCF2L-212ENST00000420013 PARD6GQ9BYG4 376 aaPredicted RBP14.25□□□□□ -0.13
MCF2L-212ENST00000420013 TMEM14CQ9P0S9 112 aa14.25□□□□□ -0.13
MCF2L-212ENST00000420013 PRELID1Q9Y255 219 aa14.25□□□□□ -0.13
MCF2L-212ENST00000420013 TIMM9Q9Y5J7 89 aa14.25□□□□□ -0.13
MCF2L-212ENST00000420013 J3KRW8 73 aa14.24□□□□□ -0.13
MCF2L-212ENST00000420013 KIR3DS1Q14943 382 aa14.24□□□□□ -0.13
MCF2L-212ENST00000420013 OR5C1Q8NGR4 320 aa14.24□□□□□ -0.13
MCF2L-212ENST00000420013 NMES1Q9C002 83 aa14.24□□□□□ -0.13
MCF2L-212ENST00000420013 ZNF586Q9NXT0 402 aa14.24□□□□□ -0.13
MCF2L-212ENST00000420013 TRBV19A0A075B6N1 114 aa14.23□□□□□ -0.13
MCF2L-212ENST00000420013 SLC25A5P05141 298 aaKnown RBP14.23□□□□□ -0.13
MCF2L-212ENST00000420013 M6PRP20645 277 aa14.23□□□□□ -0.13
MCF2L-212ENST00000420013 NHLH2Q02577 135 aa14.23□□□□□ -0.13
MCF2L-212ENST00000420013 C6orf223Q8N319 242 aa14.23□□□□□ -0.13
MCF2L-212ENST00000420013 THAP6Q8TBB0 222 aa14.23□□□□□ -0.13
MCF2L-212ENST00000420013 NPCDR1Q9BY65 106 aa14.23□□□□□ -0.13
MCF2L-212ENST00000420013 H3BNG1 76 aa14.22□□□□□ -0.13
MCF2L-212ENST00000420013 SSNA1O43805 119 aa14.22□□□□□ -0.13
MCF2L-212ENST00000420013 CT45A10P0DMU9 189 aa14.22□□□□□ -0.13
MCF2L-212ENST00000420013 HIST1H1EP10412 219 aaKnown RBP14.22□□□□□ -0.13
MCF2L-212ENST00000420013 DAZ2Q13117 558 aaKnown RBP14.22□□□□□ -0.13
MCF2L-212ENST00000420013 TTC32Q5I0X7 151 aa14.22□□□□□ -0.13
MCF2L-212ENST00000420013 ZNF680Q8NEM1 530 aa14.22□□□□□ -0.13
MCF2L-212ENST00000420013 RXFP4Q8TDU9 374 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms