RNA–Protein interactions for RNA: ENST00000419334.1

EPCAM-203, Transcript of epithelial cell adhesion molecule, humanhuman

TSL 3

Gene EPCAM, Length 609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPCAM-203ENST00000419334 HIST1H1AQ02539 215 aaPredicted RBP12.84□□□□□ -0.35
EPCAM-203ENST00000419334 PQLC2Q6ZP29 291 aa12.84□□□□□ -0.35
EPCAM-203ENST00000419334 RPP25LQ8N5L8 163 aaKnown RBP12.84□□□□□ -0.35
EPCAM-203ENST00000419334 AAMDCQ9H7C9 122 aa12.84□□□□□ -0.35
EPCAM-203ENST00000419334 hCG_2014768A0A024R1R8 64 aa12.83□□□□□ -0.36
EPCAM-203ENST00000419334 ZNF705EA8MWA4 302 aaPredicted RBP12.83□□□□□ -0.36
EPCAM-203ENST00000419334 CDC34P49427 236 aaPredicted RBP12.83□□□□□ -0.36
EPCAM-203ENST00000419334 FXYD7P58549 80 aa12.83□□□□□ -0.36
EPCAM-203ENST00000419334 A0A0J9YWU9 116 aa12.82□□□□□ -0.36
EPCAM-203ENST00000419334 PRAC2D3DTV9 90 aa12.82□□□□□ -0.36
EPCAM-203ENST00000419334 EIF3GO75821 320 aaKnown RBP eCLIP12.82□□□□□ -0.36
EPCAM-203ENST00000419334 EXOC3-AS1Q8N2X6 119 aa12.82□□□□□ -0.36
EPCAM-203ENST00000419334 OR10J6PQ8NGY7 276 aa12.82□□□□□ -0.36
EPCAM-203ENST00000419334 MUC7Q8TAX7 377 aa12.82□□□□□ -0.36
EPCAM-203ENST00000419334 PHYHIPLQ96FC7 376 aa12.82□□□□□ -0.36
EPCAM-203ENST00000419334 KANTRA0A1W2PQU2 76 aa12.81□□□□□ -0.36
EPCAM-203ENST00000419334 M0R3E3 92 aa12.81□□□□□ -0.36
EPCAM-203ENST00000419334 BCL2L11O43521 198 aa12.81□□□□□ -0.36
EPCAM-203ENST00000419334 AMBPP02760 352 aa12.81□□□□□ -0.36
EPCAM-203ENST00000419334 STAG3L2P0CL84 134 aa12.81□□□□□ -0.36
EPCAM-203ENST00000419334 STAG3L3P0CL85 134 aa12.81□□□□□ -0.36
EPCAM-203ENST00000419334 PRB4P10163 310 aaPredicted RBP12.81□□□□□ -0.36
EPCAM-203ENST00000419334 ICAM4Q14773 271 aa12.81□□□□□ -0.36
EPCAM-203ENST00000419334 LYPD1Q8N2G4 141 aa12.81□□□□□ -0.36
EPCAM-203ENST00000419334 RAB24Q969Q5 203 aa12.81□□□□□ -0.36
EPCAM-203ENST00000419334 X6R8D5 127 aa12.81□□□□□ -0.36
EPCAM-203ENST00000419334 C3orf84H3BNL1 204 aa12.8□□□□□ -0.36
EPCAM-203ENST00000419334 BOLA2-SMG1P6H3BVE0 249 aa12.8□□□□□ -0.36
EPCAM-203ENST00000419334 C1QBP02746 253 aa12.8□□□□□ -0.36
EPCAM-203ENST00000419334 MIFP14174 115 aa12.8□□□□□ -0.36
EPCAM-203ENST00000419334 SPINK13Q1W4C9 94 aa12.8□□□□□ -0.36
EPCAM-203ENST00000419334 ZNF705AQ6ZN79 300 aaPredicted RBP12.8□□□□□ -0.36
EPCAM-203ENST00000419334 AKAP14Q86UN6 197 aa12.8□□□□□ -0.36
EPCAM-203ENST00000419334 Q8NAQ8 132 aa12.8□□□□□ -0.36
EPCAM-203ENST00000419334 ACTR3CQ9C0K3 210 aaPredicted RBP12.8□□□□□ -0.36
EPCAM-203ENST00000419334 C11orf68Q9H3H3 251 aaKnown RBP12.8□□□□□ -0.36
EPCAM-203ENST00000419334 NPIPB6E9PJ23 425 aa12.79□□□□□ -0.36
EPCAM-203ENST00000419334 M0R2Z0 102 aa12.79□□□□□ -0.36
EPCAM-203ENST00000419334 HMGB3O15347 200 aaKnown RBP12.79□□□□□ -0.36
EPCAM-203ENST00000419334 ARL14EPLP0DKL9 152 aa12.79□□□□□ -0.36
EPCAM-203ENST00000419334 RANP62826 216 aaKnown RBP12.79□□□□□ -0.36
EPCAM-203ENST00000419334 TMUB2Q71RG4 321 aa12.79□□□□□ -0.36
EPCAM-203ENST00000419334 IGF2BP2-AS1Q96M15 143 aa12.79□□□□□ -0.36
EPCAM-203ENST00000419334 Q9H3A6 140 aa12.79□□□□□ -0.36
EPCAM-203ENST00000419334 PPP1R14DQ9NXH3 145 aa12.79□□□□□ -0.36
EPCAM-203ENST00000419334 CRXO43186 299 aaPredicted RBP12.78□□□□□ -0.36
EPCAM-203ENST00000419334 AKR1C8PQ5T2L2 129 aa12.78□□□□□ -0.36
EPCAM-203ENST00000419334 IL17DQ8TAD2 202 aa12.78□□□□□ -0.36
EPCAM-203ENST00000419334 ODF3Q96PU9 254 aa12.78□□□□□ -0.36
EPCAM-203ENST00000419334 NEU1Q99519 415 aa12.78□□□□□ -0.36
EPCAM-203ENST00000419334 ZNF471Q9BX82 626 aaPredicted RBP12.78□□□□□ -0.36
EPCAM-203ENST00000419334 GOLT1BQ9Y3E0 138 aa12.78□□□□□ -0.36
EPCAM-203ENST00000419334 CTXND1A0A1B0GTU2 59 aa12.77□□□□□ -0.37
EPCAM-203ENST00000419334 PFDN1O60925 122 aa12.77□□□□□ -0.37
EPCAM-203ENST00000419334 EIF5AP63241 154 aaKnown RBP12.77□□□□□ -0.37
EPCAM-203ENST00000419334 SSX7Q7RTT5 188 aa12.77□□□□□ -0.37
EPCAM-203ENST00000419334 C1orf158Q8N1D5 194 aa12.77□□□□□ -0.37
EPCAM-203ENST00000419334 HYLS1Q96M11 299 aa12.77□□□□□ -0.37
EPCAM-203ENST00000419334 IGHV4-28A0A0C4DH34 117 aa12.76□□□□□ -0.37
EPCAM-203ENST00000419334 SMIM9A6NGZ8 99 aa12.76□□□□□ -0.37
EPCAM-203ENST00000419334 CXorf1O96002 111 aa12.76□□□□□ -0.37
EPCAM-203ENST00000419334 INSP01308 110 aa12.76□□□□□ -0.37
EPCAM-203ENST00000419334 SEC11BP0C7V7 166 aa12.76□□□□□ -0.37
EPCAM-203ENST00000419334 GCHFRP30047 84 aa12.76□□□□□ -0.37
EPCAM-203ENST00000419334 CDKN1BP46527 198 aa12.76□□□□□ -0.37
EPCAM-203ENST00000419334 ZNF726P1Q15940 193 aa12.76□□□□□ -0.37
EPCAM-203ENST00000419334 LGALSLQ3ZCW2 172 aaPredicted RBP12.76□□□□□ -0.37
EPCAM-203ENST00000419334 BAP18Q8IXM2 172 aa12.76□□□□□ -0.37
EPCAM-203ENST00000419334 SUN5Q8TC36 379 aa12.76□□□□□ -0.37
EPCAM-203ENST00000419334 OTORQ9NRC9 128 aa12.76□□□□□ -0.37
EPCAM-203ENST00000419334 DNAH7Q8WXX0 4024 aa12.76□□□□□ -0.37
EPCAM-203ENST00000419334 TRAV12-2A0A075B6T6 113 aa12.75□□□□□ -0.37
EPCAM-203ENST00000419334 A0A1B0GVG6 124 aa12.75□□□□□ -0.37
EPCAM-203ENST00000419334 RBMY1A1P0DJD3 496 aaKnown RBP12.75□□□□□ -0.37
EPCAM-203ENST00000419334 RBMY1CP0DJD4 496 aa12.75□□□□□ -0.37
EPCAM-203ENST00000419334 CT45A10P0DMU9 189 aa12.75□□□□□ -0.37
EPCAM-203ENST00000419334 TSPOP30536 169 aa12.75□□□□□ -0.37
EPCAM-203ENST00000419334 CSN1S1P47710 185 aa12.75□□□□□ -0.37
EPCAM-203ENST00000419334 RBMY1FQ15415 496 aaKnown RBP12.75□□□□□ -0.37
EPCAM-203ENST00000419334 C9orf47Q6ZRZ4 202 aa12.75□□□□□ -0.37
EPCAM-203ENST00000419334 LINC00477Q96M19 166 aa12.75□□□□□ -0.37
EPCAM-203ENST00000419334 TMEM167BQ9NRX6 74 aa12.75□□□□□ -0.37
EPCAM-203ENST00000419334 IGHV3OR16-12A0A075B7B8 117 aa12.74□□□□□ -0.37
EPCAM-203ENST00000419334 DEFB4AO15263 64 aa12.74□□□□□ -0.37
EPCAM-203ENST00000419334 TPT1P13693 172 aaKnown RBP12.74□□□□□ -0.37
EPCAM-203ENST00000419334 FAM74A1Q5RGS3 127 aa12.74□□□□□ -0.37
EPCAM-203ENST00000419334 STOML3Q8TAV4 291 aa12.74□□□□□ -0.37
EPCAM-203ENST00000419334 RXFP4Q8TDU9 374 aa12.74□□□□□ -0.37
EPCAM-203ENST00000419334 AGPAT4-IT1Q9H0P7 198 aa12.74□□□□□ -0.37
EPCAM-203ENST00000419334 IGKV2-40A0A087WW87 121 aaPredicted RBP12.73□□□□□ -0.37
EPCAM-203ENST00000419334 RBAKDNA6NC62 111 aa12.73□□□□□ -0.37
EPCAM-203ENST00000419334 PGPA6NDG6 321 aa12.73□□□□□ -0.37
EPCAM-203ENST00000419334 UMAD1C9J7I0 102 aa12.73□□□□□ -0.37
EPCAM-203ENST00000419334 IGKV2D-40P01614 121 aaPredicted RBP12.73□□□□□ -0.37
EPCAM-203ENST00000419334 SLC25A5P05141 298 aaKnown RBP12.73□□□□□ -0.37
EPCAM-203ENST00000419334 LEPP41159 167 aa12.73□□□□□ -0.37
EPCAM-203ENST00000419334 ERCC8Q13216 396 aa12.73□□□□□ -0.37
EPCAM-203ENST00000419334 CASC10Q5T4H9 136 aa12.73□□□□□ -0.37
EPCAM-203ENST00000419334 TMEM256Q8N2U0 113 aa12.73□□□□□ -0.37
EPCAM-203ENST00000419334 ARL6IP6Q8N6S5 226 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms