RNA–Protein interactions for RNA: ENST00000417545.4

TRIM48-201, Transcript of tripartite motif containing 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM48, Length 1,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48-201ENST00000417545 ACTL10Q5JWF8 245 aa6.32□□□□□ -1.4
TRIM48-201ENST00000417545 DEFB125Q8N687 156 aa6.32□□□□□ -1.4
TRIM48-201ENST00000417545 OR4B1Q8NGF8 309 aa6.32□□□□□ -1.4
TRIM48-201ENST00000417545 RXFP4Q8TDU9 374 aa6.32□□□□□ -1.4
TRIM48-201ENST00000417545 RPUSD4Q96CM3 377 aaKnown RBP6.32□□□□□ -1.4
TRIM48-201ENST00000417545 ZNF503Q96F45 646 aa6.32□□□□□ -1.4
TRIM48-201ENST00000417545 FAM110AQ9BQ89 295 aa6.32□□□□□ -1.4
TRIM48-201ENST00000417545 NKX6-2Q9C056 277 aaPredicted RBP6.32□□□□□ -1.4
TRIM48-201ENST00000417545 WFDC10AQ9H1F0 79 aa6.32□□□□□ -1.4
TRIM48-201ENST00000417545 AURKAIP1Q9NWT8 199 aaPredicted RBP6.32□□□□□ -1.4
TRIM48-201ENST00000417545 PGPEP1Q9NXJ5 209 aa6.32□□□□□ -1.4
TRIM48-201ENST00000417545 A0A1W2PRE2 83 aa6.31□□□□□ -1.4
TRIM48-201ENST00000417545 KNCNA6PVL3 124 aa6.31□□□□□ -1.4
TRIM48-201ENST00000417545 SOCS3O14543 225 aa6.31□□□□□ -1.4
TRIM48-201ENST00000417545 PAGE4O60829 102 aa6.31□□□□□ -1.4
TRIM48-201ENST00000417545 IGKV3-20P01619 116 aa6.31□□□□□ -1.4
TRIM48-201ENST00000417545 NUTF2P61970 127 aaKnown RBP6.31□□□□□ -1.4
TRIM48-201ENST00000417545 SUMO1P63165 101 aaKnown RBP6.31□□□□□ -1.4
TRIM48-201ENST00000417545 KPRPQ5T749 579 aaPredicted RBP6.31□□□□□ -1.4
TRIM48-201ENST00000417545 TMEM78Q5T7P6 136 aa6.31□□□□□ -1.4
TRIM48-201ENST00000417545 FOXI2Q6ZQN5 318 aa6.31□□□□□ -1.4
TRIM48-201ENST00000417545 MRAPQ8TCY5 172 aa6.31□□□□□ -1.4
TRIM48-201ENST00000417545 MRPL53Q96EL3 112 aaKnown RBP6.31□□□□□ -1.4
TRIM48-201ENST00000417545 TRAV8-2A0A0B4J237 113 aa6.3□□□□□ -1.4
TRIM48-201ENST00000417545 TRAV1-1A0A0B4J248 108 aa6.3□□□□□ -1.4
TRIM48-201ENST00000417545 M0R3E3 92 aa6.3□□□□□ -1.4
TRIM48-201ENST00000417545 NDUFB4O95168 129 aa6.3□□□□□ -1.4
TRIM48-201ENST00000417545 RPL35AP18077 110 aaKnown RBP6.3□□□□□ -1.4
TRIM48-201ENST00000417545 TAGLN2P37802 199 aaKnown RBP6.3□□□□□ -1.4
TRIM48-201ENST00000417545 ZNF124Q15973 351 aa6.3□□□□□ -1.4
TRIM48-201ENST00000417545 HAGHQ16775 308 aa6.3□□□□□ -1.4
TRIM48-201ENST00000417545 C5orf17Q8NAS9 161 aa6.3□□□□□ -1.4
TRIM48-201ENST00000417545 PCNPQ8WW12 178 aaKnown RBP6.3□□□□□ -1.4
TRIM48-201ENST00000417545 C20orf173Q96LM9 149 aa6.3□□□□□ -1.4
TRIM48-201ENST00000417545 EIF5A2Q9GZV4 153 aaKnown RBP6.3□□□□□ -1.4
TRIM48-201ENST00000417545 ARL2-SNX15V9GYD0 113 aa6.3□□□□□ -1.4
TRIM48-201ENST00000417545 SORL1Q92673 2214 aa6.3□□□□□ -1.4
TRIM48-201ENST00000417545 CMYA5Q8N3K9 4069 aa6.29□□□□□ -1.4
TRIM48-201ENST00000417545 TRRAPQ9Y4A5 3859 aa6.29□□□□□ -1.4
TRIM48-201ENST00000417545 LOC102724200A0A096LPH7 203 aaPredicted RBP6.29□□□□□ -1.4
TRIM48-201ENST00000417545 A0A0J9YX75 114 aa6.29□□□□□ -1.4
TRIM48-201ENST00000417545 SERTM2A0A1B0GWG4 89 aa6.29□□□□□ -1.4
TRIM48-201ENST00000417545 FAM74A7A6NL05 159 aa6.29□□□□□ -1.4
TRIM48-201ENST00000417545 ZNF705FA8MVS1 300 aaPredicted RBP6.29□□□□□ -1.4
TRIM48-201ENST00000417545 C11orf94C9JXX5 98 aa6.29□□□□□ -1.4
TRIM48-201ENST00000417545 F6UB75 175 aa6.29□□□□□ -1.4
TRIM48-201ENST00000417545 IGHV4-30-4P0DP06 118 aa6.29□□□□□ -1.4
TRIM48-201ENST00000417545 PRB4P10163 310 aaPredicted RBP6.29□□□□□ -1.4
TRIM48-201ENST00000417545 HLA-DRB4P13762 266 aa6.29□□□□□ -1.4
TRIM48-201ENST00000417545 AKR1C3P42330 323 aa6.29□□□□□ -1.4
TRIM48-201ENST00000417545 APOC4P55056 127 aa6.29□□□□□ -1.4
TRIM48-201ENST00000417545 UBE2G1P62253 170 aa6.29□□□□□ -1.4
TRIM48-201ENST00000417545 GOLT1AQ6ZVE7 132 aa6.29□□□□□ -1.4
TRIM48-201ENST00000417545 OR8A1Q8NGG7 326 aa6.29□□□□□ -1.4
TRIM48-201ENST00000417545 NDFIP1Q9BT67 221 aa6.29□□□□□ -1.4
TRIM48-201ENST00000417545 SAV1Q9H4B6 383 aaPredicted RBP6.29□□□□□ -1.4
TRIM48-201ENST00000417545 YTHDF2Q9Y5A9 579 aaKnown RBP6.29□□□□□ -1.4
TRIM48-201ENST00000417545 HLA-DRB4X5D2U9 266 aa6.29□□□□□ -1.4
TRIM48-201ENST00000417545 VWFP04275 2813 aa6.29□□□□□ -1.4
TRIM48-201ENST00000417545 IGKV2-40A0A087WW87 121 aaPredicted RBP6.28□□□□□ -1.4
TRIM48-201ENST00000417545 IGKV2D-40P01614 121 aaPredicted RBP6.28□□□□□ -1.4
TRIM48-201ENST00000417545 ZNF705DP0CH99 300 aaPredicted RBP6.28□□□□□ -1.4
TRIM48-201ENST00000417545 ZNF705BP0CI00 300 aaPredicted RBP6.28□□□□□ -1.4
TRIM48-201ENST00000417545 BCL2P10415 239 aa6.28□□□□□ -1.4
TRIM48-201ENST00000417545 ATP5G3P48201 142 aa6.28□□□□□ -1.4
TRIM48-201ENST00000417545 CNN1P51911 297 aaKnown RBP6.28□□□□□ -1.4
TRIM48-201ENST00000417545 DEFB1P60022 68 aa6.28□□□□□ -1.4
TRIM48-201ENST00000417545 GNG5P63218 68 aa6.28□□□□□ -1.4
TRIM48-201ENST00000417545 DEFA6Q01524 100 aa6.28□□□□□ -1.4
TRIM48-201ENST00000417545 CYB561D1Q8N8Q1 229 aa6.28□□□□□ -1.4
TRIM48-201ENST00000417545 SUN5Q8TC36 379 aa6.28□□□□□ -1.4
TRIM48-201ENST00000417545 TXNDC17Q9BRA2 123 aa6.28□□□□□ -1.4
TRIM48-201ENST00000417545 TCEAL7Q9BRU2 100 aa6.28□□□□□ -1.4
TRIM48-201ENST00000417545 ATG101Q9BSB4 218 aa6.28□□□□□ -1.4
TRIM48-201ENST00000417545 VAX2Q9UIW0 290 aa6.28□□□□□ -1.4
TRIM48-201ENST00000417545 GGTLC3B5MD39 225 aa6.27□□□□□ -1.41
TRIM48-201ENST00000417545 DIRC3C9JPN6 131 aa6.27□□□□□ -1.41
TRIM48-201ENST00000417545 K7EIL1 84 aa6.27□□□□□ -1.41
TRIM48-201ENST00000417545 PEX7O00628 323 aa6.27□□□□□ -1.41
TRIM48-201ENST00000417545 CA1P00915 261 aaPredicted RBP6.27□□□□□ -1.41
TRIM48-201ENST00000417545 TSPOP30536 169 aa6.27□□□□□ -1.41
TRIM48-201ENST00000417545 LEPP41159 167 aa6.27□□□□□ -1.41
TRIM48-201ENST00000417545 CEBPGP53567 150 aa6.27□□□□□ -1.41
TRIM48-201ENST00000417545 CCL20P78556 96 aa6.27□□□□□ -1.41
TRIM48-201ENST00000417545 MEF2BQ02080 365 aaPredicted RBP6.27□□□□□ -1.41
TRIM48-201ENST00000417545 TOR2AQ5JU69 321 aa6.27□□□□□ -1.41
TRIM48-201ENST00000417545 MORN3Q6PF18 240 aaPredicted RBP6.27□□□□□ -1.41
TRIM48-201ENST00000417545 Q8N1Y9 231 aa6.27□□□□□ -1.41
TRIM48-201ENST00000417545 HIST1H2BAQ96A08 127 aa6.27□□□□□ -1.41
TRIM48-201ENST00000417545 C1QTNF4Q9BXJ3 329 aa6.27□□□□□ -1.41
TRIM48-201ENST00000417545 EPDR1Q9UM22 224 aa6.27□□□□□ -1.41
TRIM48-201ENST00000417545 RBAKDNA6NC62 111 aa6.26□□□□□ -1.41
TRIM48-201ENST00000417545 RBFOX3A6NFN3 312 aa6.26□□□□□ -1.41
TRIM48-201ENST00000417545 FBLL1A6NHQ2 334 aaKnown RBP6.26□□□□□ -1.41
TRIM48-201ENST00000417545 A6NJY4 79 aa6.26□□□□□ -1.41
TRIM48-201ENST00000417545 PRAC2D3DTV9 90 aa6.26□□□□□ -1.41
TRIM48-201ENST00000417545 H3BMM0 161 aa6.26□□□□□ -1.41
TRIM48-201ENST00000417545 J3KRW8 73 aa6.26□□□□□ -1.41
TRIM48-201ENST00000417545 PDE6DO43924 150 aa6.26□□□□□ -1.41
TRIM48-201ENST00000417545 AMBPP02760 352 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms