RNA–Protein interactions for RNA: ENST00000417448.1

VCP-202, Transcript of valosin containing protein, humanhuman

TSL 3

Gene VCP, Length 722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-202ENST00000417448 FUT9Q9Y231 359 aa12.97□□□□□ -0.33
VCP-202ENST00000417448 HMGB3O15347 200 aaKnown RBP12.96□□□□□ -0.33
VCP-202ENST00000417448 OR10J4P0C629 311 aa12.96□□□□□ -0.33
VCP-202ENST00000417448 HLA-DRB4P13762 266 aa12.96□□□□□ -0.33
VCP-202ENST00000417448 CXCL2P19875 107 aa12.96□□□□□ -0.33
VCP-202ENST00000417448 CD300CQ08708 224 aa12.96□□□□□ -0.33
VCP-202ENST00000417448 PSG3Q16557 428 aa12.96□□□□□ -0.33
VCP-202ENST00000417448 SAT2Q96F10 170 aaPredicted RBP12.96□□□□□ -0.33
VCP-202ENST00000417448 ZNF331Q9NQX6 463 aaPredicted RBP12.96□□□□□ -0.33
VCP-202ENST00000417448 CYTL1Q9NRR1 136 aa12.96□□□□□ -0.33
VCP-202ENST00000417448 HLA-DRB4X5D2U9 266 aa12.96□□□□□ -0.33
VCP-202ENST00000417448 A0A0J9YX75 114 aa12.95□□□□□ -0.34
VCP-202ENST00000417448 PRAC2D3DTV9 90 aa12.95□□□□□ -0.34
VCP-202ENST00000417448 ZNF266Q14584 549 aa12.95□□□□□ -0.34
VCP-202ENST00000417448 FOXI2Q6ZQN5 318 aa12.95□□□□□ -0.34
VCP-202ENST00000417448 ZNF503Q96F45 646 aa12.95□□□□□ -0.34
VCP-202ENST00000417448 SLC35B3Q9H1N7 401 aa12.95□□□□□ -0.34
VCP-202ENST00000417448 HRH4Q9H3N8 390 aa12.95□□□□□ -0.34
VCP-202ENST00000417448 NDUFB4O95168 129 aa12.94□□□□□ -0.34
VCP-202ENST00000417448 ACOT6Q3I5F7 207 aaPredicted RBP12.94□□□□□ -0.34
VCP-202ENST00000417448 EBLN2Q6P2I7 272 aa12.94□□□□□ -0.34
VCP-202ENST00000417448 LCN15Q6UWW0 184 aa12.94□□□□□ -0.34
VCP-202ENST00000417448 OR10G4Q8NGN3 311 aa12.94□□□□□ -0.34
VCP-202ENST00000417448 OR10G9Q8NGN4 311 aa12.94□□□□□ -0.34
VCP-202ENST00000417448 OR10G7Q8NGN6 311 aa12.94□□□□□ -0.34
VCP-202ENST00000417448 OR11H2Q8NH07 326 aa12.94□□□□□ -0.34
VCP-202ENST00000417448 PAXXQ9BUH6 204 aa12.94□□□□□ -0.34
VCP-202ENST00000417448 OR51M1Q9H341 326 aa12.94□□□□□ -0.34
VCP-202ENST00000417448 TMEM14CQ9P0S9 112 aa12.94□□□□□ -0.34
VCP-202ENST00000417448 XCL2Q9UBD3 114 aa12.94□□□□□ -0.34
VCP-202ENST00000417448 RNF24Q9Y225 148 aa12.94□□□□□ -0.34
VCP-202ENST00000417448 TIMM9Q9Y5J7 89 aa12.94□□□□□ -0.34
VCP-202ENST00000417448 BORCS7-ASMTA0A0B4J1R7 106 aa12.93□□□□□ -0.34
VCP-202ENST00000417448 OR7C2O60412 319 aa12.93□□□□□ -0.34
VCP-202ENST00000417448 HIST1H1EP10412 219 aaKnown RBP12.93□□□□□ -0.34
VCP-202ENST00000417448 RHOBP62745 196 aa12.93□□□□□ -0.34
VCP-202ENST00000417448 EXOC3-AS1Q8N2X6 119 aa12.93□□□□□ -0.34
VCP-202ENST00000417448 KCNRGQ8N5I3 272 aa12.93□□□□□ -0.34
VCP-202ENST00000417448 RPUSD4Q96CM3 377 aaKnown RBP12.93□□□□□ -0.34
VCP-202ENST00000417448 FXYD5Q96DB9 178 aa12.93□□□□□ -0.34
VCP-202ENST00000417448 MRPL32Q9BYC8 188 aaKnown RBP12.93□□□□□ -0.34
VCP-202ENST00000417448 LRP1BQ9NZR2 4599 aa12.92□□□□□ -0.34
VCP-202ENST00000417448 TRBV19A0A075B6N1 114 aa12.92□□□□□ -0.34
VCP-202ENST00000417448 M0R2N4 97 aa12.92□□□□□ -0.34
VCP-202ENST00000417448 M6PRP20645 277 aa12.92□□□□□ -0.34
VCP-202ENST00000417448 CNN1P51911 297 aaKnown RBP12.92□□□□□ -0.34
VCP-202ENST00000417448 HIST1H1AQ02539 215 aaPredicted RBP12.92□□□□□ -0.34
VCP-202ENST00000417448 SAMD13Q5VXD3 122 aa12.92□□□□□ -0.34
VCP-202ENST00000417448 RNF141Q8WVD5 230 aa12.92□□□□□ -0.34
VCP-202ENST00000417448 HMSDA8MTL9 139 aa12.91□□□□□ -0.34
VCP-202ENST00000417448 M0R3E3 92 aa12.91□□□□□ -0.34
VCP-202ENST00000417448 NBEAP1P0C6P0 100 aa12.91□□□□□ -0.34
VCP-202ENST00000417448 SPP1P10451 314 aa12.91□□□□□ -0.34
VCP-202ENST00000417448 SSX7Q7RTT5 188 aa12.91□□□□□ -0.34
VCP-202ENST00000417448 OR2G3Q8NGZ4 309 aa12.91□□□□□ -0.34
VCP-202ENST00000417448 SLC50A1Q9BRV3 221 aa12.91□□□□□ -0.34
VCP-202ENST00000417448 PSMG3Q9BT73 122 aaPredicted RBP12.91□□□□□ -0.34
VCP-202ENST00000417448 IGHV4-4A0A075B6R2 117 aa12.9□□□□□ -0.34
VCP-202ENST00000417448 A0A1W2PPV4 95 aa12.9□□□□□ -0.34
VCP-202ENST00000417448 C11orf94C9JXX5 98 aa12.9□□□□□ -0.34
VCP-202ENST00000417448 MORN3Q6PF18 240 aaPredicted RBP12.9□□□□□ -0.34
VCP-202ENST00000417448 OR8A1Q8NGG7 326 aa12.9□□□□□ -0.34
VCP-202ENST00000417448 PHYHIPLQ96FC7 376 aa12.9□□□□□ -0.34
VCP-202ENST00000417448 ARPC5LQ9BPX5 153 aa12.9□□□□□ -0.34
VCP-202ENST00000417448 APOBP04114 4563 aaKnown RBP12.89□□□□□ -0.35
VCP-202ENST00000417448 PSG9Q00887 426 aa12.89□□□□□ -0.35
VCP-202ENST00000417448 ICAM4Q14773 271 aa12.89□□□□□ -0.35
VCP-202ENST00000417448 GUK1Q16774 197 aa12.89□□□□□ -0.35
VCP-202ENST00000417448 AMTNQ6UX39 209 aa12.89□□□□□ -0.35
VCP-202ENST00000417448 TMUB2Q71RG4 321 aa12.89□□□□□ -0.35
VCP-202ENST00000417448 TCTE3Q8IZS6 198 aa12.89□□□□□ -0.35
VCP-202ENST00000417448 CSNK1G2-AS1Q8NCQ2 148 aa12.89□□□□□ -0.35
VCP-202ENST00000417448 M0R2Z0 102 aa12.88□□□□□ -0.35
VCP-202ENST00000417448 TAAR5O14804 337 aa12.88□□□□□ -0.35
VCP-202ENST00000417448 CDC34P49427 236 aaPredicted RBP12.88□□□□□ -0.35
VCP-202ENST00000417448 RANP62826 216 aaKnown RBP12.88□□□□□ -0.35
VCP-202ENST00000417448 UBE2L3P68036 154 aaKnown RBP12.88□□□□□ -0.35
VCP-202ENST00000417448 SPINK13Q1W4C9 94 aa12.88□□□□□ -0.35
VCP-202ENST00000417448 KHDC3LQ587J8 217 aa12.88□□□□□ -0.35
VCP-202ENST00000417448 AKAP14Q86UN6 197 aa12.88□□□□□ -0.35
VCP-202ENST00000417448 MAPKAPK5-AS1Q8N8E1 139 aa12.88□□□□□ -0.35
VCP-202ENST00000417448 RAB24Q969Q5 203 aa12.88□□□□□ -0.35
VCP-202ENST00000417448 IGHV3OR16-12A0A075B7B8 117 aa12.87□□□□□ -0.35
VCP-202ENST00000417448 A0A0D9SG52 128 aa12.87□□□□□ -0.35
VCP-202ENST00000417448 DUSP14O95147 198 aaKnown RBP12.87□□□□□ -0.35
VCP-202ENST00000417448 SERF2P84101 59 aa12.87□□□□□ -0.35
VCP-202ENST00000417448 ERCC8Q13216 396 aa12.87□□□□□ -0.35
VCP-202ENST00000417448 ZNF345Q14585 488 aa12.87□□□□□ -0.35
VCP-202ENST00000417448 LGALSLQ3ZCW2 172 aaPredicted RBP12.87□□□□□ -0.35
VCP-202ENST00000417448 TMEM41BQ5BJD5 291 aa12.87□□□□□ -0.35
VCP-202ENST00000417448 Q6ZTC4 211 aa12.87□□□□□ -0.35
VCP-202ENST00000417448 POM121L12Q8N7R1 296 aa12.87□□□□□ -0.35
VCP-202ENST00000417448 Q8NAQ8 132 aa12.87□□□□□ -0.35
VCP-202ENST00000417448 GNPNAT1Q96EK6 184 aaPredicted RBP12.87□□□□□ -0.35
VCP-202ENST00000417448 ZNF471Q9BX82 626 aaPredicted RBP12.87□□□□□ -0.35
VCP-202ENST00000417448 TRAV12-2A0A075B6T6 113 aa12.86□□□□□ -0.35
VCP-202ENST00000417448 BCL2L11O43521 198 aa12.86□□□□□ -0.35
VCP-202ENST00000417448 ARL14EPLP0DKL9 152 aa12.86□□□□□ -0.35
VCP-202ENST00000417448 TAS2R45P59539 299 aa12.86□□□□□ -0.35
VCP-202ENST00000417448 NUTF2P61970 127 aaKnown RBP12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms