RNA–Protein interactions for RNA: ENST00000415758.1

DDX56-202, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,287 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-202ENST00000415758 TOMM5Q8N4H5 51 aa10.51□□□□□ -0.73
DDX56-202ENST00000415758 SLIRPQ9GZT3 109 aaKnown RBP10.51□□□□□ -0.73
DDX56-202ENST00000415758 PXMP4Q9Y6I8 212 aa10.51□□□□□ -0.73
DDX56-202ENST00000415758 FLG2Q5D862 2391 aaPredicted RBP10.5□□□□□ -0.73
DDX56-202ENST00000415758 TRGV2A0A075B6R0 118 aa10.5□□□□□ -0.73
DDX56-202ENST00000415758 LINC00854A0A1B0GVQ3 168 aa10.5□□□□□ -0.73
DDX56-202ENST00000415758 SLC17A3O00476 420 aa10.5□□□□□ -0.73
DDX56-202ENST00000415758 CCNKO75909 580 aa10.5□□□□□ -0.73
DDX56-202ENST00000415758 SNRPCP09234 159 aaKnown RBP10.5□□□□□ -0.73
DDX56-202ENST00000415758 IGLC2P0DOY2 106 aa10.5□□□□□ -0.73
DDX56-202ENST00000415758 FUSP35637 526 aaKnown RBP eCLIP10.5□□□□□ -0.73
DDX56-202ENST00000415758 LEPP41159 167 aa10.5□□□□□ -0.73
DDX56-202ENST00000415758 UBE2MP61081 183 aaKnown RBP10.5□□□□□ -0.73
DDX56-202ENST00000415758 RRAS2P62070 204 aaPredicted RBP10.5□□□□□ -0.73
DDX56-202ENST00000415758 NFE4Q86UQ8 179 aa10.5□□□□□ -0.73
DDX56-202ENST00000415758 C11orf72Q8NBR9 251 aa10.5□□□□□ -0.73
DDX56-202ENST00000415758 OR10P1Q8NGE3 313 aa10.5□□□□□ -0.73
DDX56-202ENST00000415758 RAB2BQ8WUD1 216 aa10.5□□□□□ -0.73
DDX56-202ENST00000415758 BCL7BQ9BQE9 202 aa10.5□□□□□ -0.73
DDX56-202ENST00000415758 A0A087WTM6 91 aa10.49□□□□□ -0.73
DDX56-202ENST00000415758 NPIPB6E9PJ23 425 aa10.49□□□□□ -0.73
DDX56-202ENST00000415758 GOSR2O14653 212 aa10.49□□□□□ -0.73
DDX56-202ENST00000415758 NXPH4O95158 308 aa10.49□□□□□ -0.73
DDX56-202ENST00000415758 KRTAP10-1P60331 282 aa10.49□□□□□ -0.73
DDX56-202ENST00000415758 SLC38A11Q08AI6 406 aa10.49□□□□□ -0.73
DDX56-202ENST00000415758 ZNF546Q86UE3 836 aa10.49□□□□□ -0.73
DDX56-202ENST00000415758 ZNF680Q8NEM1 530 aa10.49□□□□□ -0.73
DDX56-202ENST00000415758 TMEM37Q8WXS4 190 aa10.49□□□□□ -0.73
DDX56-202ENST00000415758 LINC00467Q9BRT7 94 aa10.49□□□□□ -0.73
DDX56-202ENST00000415758 MRPS26Q9BYN8 205 aaKnown RBP10.49□□□□□ -0.73
DDX56-202ENST00000415758 GSN-AS1Q9NRJ2 163 aa10.49□□□□□ -0.73
DDX56-202ENST00000415758 MGAT4CQ9UBM8 478 aa10.49□□□□□ -0.73
DDX56-202ENST00000415758 TNFRSF18Q9Y5U5 241 aa10.49□□□□□ -0.73
DDX56-202ENST00000415758 SRRM2Q9UQ35 2752 aaKnown RBP10.49□□□□□ -0.73
DDX56-202ENST00000415758 H3BQ15 152 aa10.48□□□□□ -0.73
DDX56-202ENST00000415758 AGPAT2O15120 278 aa10.48□□□□□ -0.73
DDX56-202ENST00000415758 SSSCA1O60232 199 aa10.48□□□□□ -0.73
DDX56-202ENST00000415758 ZNF324O75467 553 aaPredicted RBP10.48□□□□□ -0.73
DDX56-202ENST00000415758 IFNA5P01569 189 aa10.48□□□□□ -0.73
DDX56-202ENST00000415758 SLC25A5P05141 298 aaKnown RBP10.48□□□□□ -0.73
DDX56-202ENST00000415758 METTL15P1P0C7V9 234 aa10.48□□□□□ -0.73
DDX56-202ENST00000415758 TMBIM6P55061 237 aa10.48□□□□□ -0.73
DDX56-202ENST00000415758 TAS2R30P59541 319 aa10.48□□□□□ -0.73
DDX56-202ENST00000415758 GUK1Q16774 197 aa10.48□□□□□ -0.73
DDX56-202ENST00000415758 ANXA2RQ3ZCQ2 193 aa10.48□□□□□ -0.73
DDX56-202ENST00000415758 MORN5Q5VZ52 161 aa10.48□□□□□ -0.73
DDX56-202ENST00000415758 GGACTQ9BVM4 153 aa10.48□□□□□ -0.73
DDX56-202ENST00000415758 FUT9Q9Y231 359 aa10.48□□□□□ -0.73
DDX56-202ENST00000415758 C9orf170A2RU37 121 aa10.47□□□□□ -0.73
DDX56-202ENST00000415758 J3KRW8 73 aa10.47□□□□□ -0.73
DDX56-202ENST00000415758 SPINK4O60575 86 aa10.47□□□□□ -0.73
DDX56-202ENST00000415758 TSC22D2O75157 780 aa10.47□□□□□ -0.73
DDX56-202ENST00000415758 OPCMLQ14982 345 aa10.47□□□□□ -0.73
DDX56-202ENST00000415758 MCFD2Q8NI22 146 aa10.47□□□□□ -0.73
DDX56-202ENST00000415758 ICOSQ9Y6W8 199 aa10.47□□□□□ -0.73
DDX56-202ENST00000415758 TRGV1A0A0A0MS02 117 aa10.46□□□□□ -0.73
DDX56-202ENST00000415758 KLLNB2CW77 178 aa10.46□□□□□ -0.73
DDX56-202ENST00000415758 H3BTX0 84 aa10.46□□□□□ -0.73
DDX56-202ENST00000415758 K7EP13 123 aa10.46□□□□□ -0.73
DDX56-202ENST00000415758 PAX4O43316 350 aa10.46□□□□□ -0.73
DDX56-202ENST00000415758 COX7A2P2O60397 106 aa10.46□□□□□ -0.73
DDX56-202ENST00000415758 DNAH10OSP0CZ25 163 aa10.46□□□□□ -0.73
DDX56-202ENST00000415758 ICAM4Q14773 271 aa10.46□□□□□ -0.73
DDX56-202ENST00000415758 C10orf113Q5VZT2 155 aa10.46□□□□□ -0.73
DDX56-202ENST00000415758 LYPD5Q6UWN5 251 aa10.46□□□□□ -0.73
DDX56-202ENST00000415758 ST6GAL2Q96JF0 529 aa10.46□□□□□ -0.73
DDX56-202ENST00000415758 TRAV9-2A0A087WT02 112 aa10.45□□□□□ -0.74
DDX56-202ENST00000415758 C7orf71A4D174 169 aa10.45□□□□□ -0.74
DDX56-202ENST00000415758 ZNF253O75346 499 aa10.45□□□□□ -0.74
DDX56-202ENST00000415758 TCL1AP56279 114 aa10.45□□□□□ -0.74
DDX56-202ENST00000415758 ARL16Q0P5N6 197 aa10.45□□□□□ -0.74
DDX56-202ENST00000415758 SLAQ13239 276 aa10.45□□□□□ -0.74
DDX56-202ENST00000415758 PYDC2Q56P42 97 aa10.45□□□□□ -0.74
DDX56-202ENST00000415758 EIF4E3Q8N5X7 224 aaKnown RBP10.45□□□□□ -0.74
DDX56-202ENST00000415758 MRPL53Q96EL3 112 aaKnown RBP10.45□□□□□ -0.74
DDX56-202ENST00000415758 FAM19A4Q96LR4 140 aa10.45□□□□□ -0.74
DDX56-202ENST00000415758 MGST2Q99735 147 aa10.45□□□□□ -0.74
DDX56-202ENST00000415758 DNAJC4Q9NNZ3 241 aa10.45□□□□□ -0.74
DDX56-202ENST00000415758 PRO0255Q9UI72 69 aa10.45□□□□□ -0.74
DDX56-202ENST00000415758 MRPL23Q16540 153 aaKnown RBP10.44□□□□□ -0.74
DDX56-202ENST00000415758 IBA57Q5T440 356 aaKnown RBP10.44□□□□□ -0.74
DDX56-202ENST00000415758 LINC00477Q96M19 166 aa10.44□□□□□ -0.74
DDX56-202ENST00000415758 KLF12Q9Y4X4 402 aa10.44□□□□□ -0.74
DDX56-202ENST00000415758 V9GYH0 126 aa10.44□□□□□ -0.74
DDX56-202ENST00000415758 FAM229AH3BQW9 127 aa10.43□□□□□ -0.74
DDX56-202ENST00000415758 SMR3BP02814 79 aaPredicted RBP10.43□□□□□ -0.74
DDX56-202ENST00000415758 OR4E1P0C645 316 aa10.43□□□□□ -0.74
DDX56-202ENST00000415758 GCSHP23434 173 aa10.43□□□□□ -0.74
DDX56-202ENST00000415758 CRYBA4P53673 196 aa10.43□□□□□ -0.74
DDX56-202ENST00000415758 CD300CQ08708 224 aa10.43□□□□□ -0.74
DDX56-202ENST00000415758 MDFICQ9P1T7 246 aa10.43□□□□□ -0.74
DDX56-202ENST00000415758 HHLA3Q9XRX5 114 aa10.43□□□□□ -0.74
DDX56-202ENST00000415758 RCL1Q9Y2P8 373 aaKnown RBP10.43□□□□□ -0.74
DDX56-202ENST00000415758 LY96Q9Y6Y9 160 aa10.43□□□□□ -0.74
DDX56-202ENST00000415758 TRAV5A0A0B4J249 113 aa10.42□□□□□ -0.74
DDX56-202ENST00000415758 C7orf66A4D0T2 115 aa10.42□□□□□ -0.74
DDX56-202ENST00000415758 H3BMQ9 156 aa10.42□□□□□ -0.74
DDX56-202ENST00000415758 MPDU1O75352 247 aa10.42□□□□□ -0.74
DDX56-202ENST00000415758 CRISP2P16562 243 aa10.42□□□□□ -0.74
DDX56-202ENST00000415758 FHL2Q14192 279 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms