RNA–Protein interactions for RNA: ENST00000415749.1

EPHA4-204, Transcript of EPH receptor A4, humanhuman

TSL 4

Gene EPHA4, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-204ENST00000415749 LYZL2Q7Z4W2 148 aa4.3□□□□□ -1.72
EPHA4-204ENST00000415749 MRPL52Q86TS9 123 aaKnown RBP4.3□□□□□ -1.72
EPHA4-204ENST00000415749 GAPTQ8N292 157 aa4.3□□□□□ -1.72
EPHA4-204ENST00000415749 SVBPQ8N300 66 aa4.3□□□□□ -1.72
EPHA4-204ENST00000415749 C11orf42Q8N5U0 333 aa4.3□□□□□ -1.72
EPHA4-204ENST00000415749 SREK1IP1Q8N9Q2 155 aaPredicted RBP4.3□□□□□ -1.72
EPHA4-204ENST00000415749 KLHL30-AS1Q8NEE0 82 aa4.3□□□□□ -1.72
EPHA4-204ENST00000415749 RTN4IP1Q8WWV3 396 aaPredicted RBP4.3□□□□□ -1.72
EPHA4-204ENST00000415749 ABHD14BQ96IU4 210 aa4.3□□□□□ -1.72
EPHA4-204ENST00000415749 PAXXQ9BUH6 204 aa4.3□□□□□ -1.72
EPHA4-204ENST00000415749 TLNRD1Q9H1K6 362 aa4.3□□□□□ -1.72
EPHA4-204ENST00000415749 RHOFQ9HBH0 211 aa4.3□□□□□ -1.72
EPHA4-204ENST00000415749 TAF9BQ9HBM6 251 aa4.3□□□□□ -1.72
EPHA4-204ENST00000415749 C12orf4Q9NQ89 552 aa4.3□□□□□ -1.72
EPHA4-204ENST00000415749 SLC7A11Q9UPY5 501 aa4.3□□□□□ -1.72
EPHA4-204ENST00000415749 TBL2Q9Y4P3 447 aaKnown RBP4.3□□□□□ -1.72
EPHA4-204ENST00000415749 IGKV1-6A0A0C4DH72 117 aa4.29□□□□□ -1.72
EPHA4-204ENST00000415749 DUXBA0A1W2PPF3 345 aa4.29□□□□□ -1.72
EPHA4-204ENST00000415749 CDIPTO14735 213 aa4.29□□□□□ -1.72
EPHA4-204ENST00000415749 PITX3O75364 302 aa4.29□□□□□ -1.72
EPHA4-204ENST00000415749 CDS2O95674 445 aa4.29□□□□□ -1.72
EPHA4-204ENST00000415749 PPYP01298 95 aa4.29□□□□□ -1.72
EPHA4-204ENST00000415749 IFNA21P01568 189 aa4.29□□□□□ -1.72
EPHA4-204ENST00000415749 GABRA2P47869 451 aa4.29□□□□□ -1.72
EPHA4-204ENST00000415749 AKR1C2P52895 323 aa4.29□□□□□ -1.72
EPHA4-204ENST00000415749 S100A10P60903 97 aa4.29□□□□□ -1.72
EPHA4-204ENST00000415749 FLI1Q01543 452 aaPredicted RBP4.29□□□□□ -1.72
EPHA4-204ENST00000415749 AKR1C1Q04828 323 aa4.29□□□□□ -1.72
EPHA4-204ENST00000415749 PLECQ15149 4684 aaKnown RBP4.29□□□□□ -1.72
EPHA4-204ENST00000415749 Q1RN00 199 aa4.29□□□□□ -1.72
EPHA4-204ENST00000415749 MPV17LQ2QL34 196 aa4.29□□□□□ -1.72
EPHA4-204ENST00000415749 SP6Q3SY56 376 aa4.29□□□□□ -1.72
EPHA4-204ENST00000415749 NMSQ5H8A3 153 aa4.29□□□□□ -1.72
EPHA4-204ENST00000415749 LDLRAD2Q5SZI1 272 aa4.29□□□□□ -1.72
EPHA4-204ENST00000415749 EIF5AL1Q6IS14 154 aaKnown RBP4.29□□□□□ -1.72
EPHA4-204ENST00000415749 SLC25A26Q70HW3 274 aa4.29□□□□□ -1.72
EPHA4-204ENST00000415749 LINC00596Q86U02 117 aa4.29□□□□□ -1.72
EPHA4-204ENST00000415749 KRTAP7-1Q8IUC3 87 aa4.29□□□□□ -1.72
EPHA4-204ENST00000415749 ZNF695Q8IW36 515 aa4.29□□□□□ -1.72
EPHA4-204ENST00000415749 LGI3Q8N145 548 aa4.29□□□□□ -1.72
EPHA4-204ENST00000415749 POM121L12Q8N7R1 296 aa4.29□□□□□ -1.72
EPHA4-204ENST00000415749 C11orf72Q8NBR9 251 aa4.29□□□□□ -1.72
EPHA4-204ENST00000415749 OR10G9Q8NGN4 311 aa4.29□□□□□ -1.72
EPHA4-204ENST00000415749 MRPL30Q8TCC3 161 aaKnown RBP4.29□□□□□ -1.72
EPHA4-204ENST00000415749 OR5P3Q8WZ94 311 aa4.29□□□□□ -1.72
EPHA4-204ENST00000415749 RNF185Q96GF1 192 aa4.29□□□□□ -1.72
EPHA4-204ENST00000415749 GAFA1Q96PS6 74 aa4.29□□□□□ -1.72
EPHA4-204ENST00000415749 TP53RKQ96S44 253 aa4.29□□□□□ -1.72
EPHA4-204ENST00000415749 TM2D3Q9BRN9 247 aa4.29□□□□□ -1.72
EPHA4-204ENST00000415749 TMEM222Q9H0R3 208 aa4.29□□□□□ -1.72
EPHA4-204ENST00000415749 C19orf12Q9NSK7 152 aa4.29□□□□□ -1.72
EPHA4-204ENST00000415749 GSKIPQ9P0R6 139 aa4.29□□□□□ -1.72
EPHA4-204ENST00000415749 ZNF257Q9Y2Q1 563 aa4.29□□□□□ -1.72
EPHA4-204ENST00000415749 HILPDAQ9Y5L2 63 aa4.29□□□□□ -1.72
EPHA4-204ENST00000415749 IGSF23A1L1A6 192 aa4.28□□□□□ -1.72
EPHA4-204ENST00000415749 COLCA2A8K830 154 aa4.28□□□□□ -1.72
EPHA4-204ENST00000415749 MED6O75586 246 aa4.28□□□□□ -1.72
EPHA4-204ENST00000415749 SCTP09683 121 aa4.28□□□□□ -1.72
EPHA4-204ENST00000415749 SNCAP37840 140 aa4.28□□□□□ -1.72
EPHA4-204ENST00000415749 ZNF138P52744 262 aa4.28□□□□□ -1.72
EPHA4-204ENST00000415749 PRR3P79522 188 aaKnown RBP4.28□□□□□ -1.72
EPHA4-204ENST00000415749 DEFA5Q01523 94 aa4.28□□□□□ -1.72
EPHA4-204ENST00000415749 SMCO1Q147U7 214 aa4.28□□□□□ -1.72
EPHA4-204ENST00000415749 PSG5Q15238 335 aa4.28□□□□□ -1.72
EPHA4-204ENST00000415749 Q6P435 159 aa4.28□□□□□ -1.72
EPHA4-204ENST00000415749 WDR86Q86TI4 376 aa4.28□□□□□ -1.72
EPHA4-204ENST00000415749 H1FOOQ8IZA3 346 aaPredicted RBP4.28□□□□□ -1.72
EPHA4-204ENST00000415749 SLC35G3Q8N808 338 aa4.28□□□□□ -1.72
EPHA4-204ENST00000415749 OR5A2Q8NGI9 324 aa4.28□□□□□ -1.72
EPHA4-204ENST00000415749 OR13D1Q8NGV5 346 aa4.28□□□□□ -1.72
EPHA4-204ENST00000415749 OR4S2Q8NH73 311 aa4.28□□□□□ -1.72
EPHA4-204ENST00000415749 OR51I2Q9H344 312 aa4.28□□□□□ -1.72
EPHA4-204ENST00000415749 CACFD1Q9UGQ2 172 aa4.28□□□□□ -1.72
EPHA4-204ENST00000415749 PRELID3BQ9Y3B1 194 aa4.28□□□□□ -1.72
EPHA4-204ENST00000415749 LSM5Q9Y4Y9 91 aaKnown RBP4.28□□□□□ -1.72
EPHA4-204ENST00000415749 KIAA1109Q2LD37 5005 aa4.28□□□□□ -1.72
EPHA4-204ENST00000415749 STARD9Q9P2P6 4700 aa4.28□□□□□ -1.72
EPHA4-204ENST00000415749 C3orf85A0A1B0GTC6 90 aa4.27□□□□□ -1.73
EPHA4-204ENST00000415749 ODF3BA8MYP8 253 aa4.27□□□□□ -1.73
EPHA4-204ENST00000415749 F8W036 122 aa4.27□□□□□ -1.73
EPHA4-204ENST00000415749 LINC01619G3V211 115 aa4.27□□□□□ -1.73
EPHA4-204ENST00000415749 PEX7O00628 323 aa4.27□□□□□ -1.73
EPHA4-204ENST00000415749 OR7C1O76099 320 aaPredicted RBP4.27□□□□□ -1.73
EPHA4-204ENST00000415749 LY6G6CO95867 125 aa4.27□□□□□ -1.73
EPHA4-204ENST00000415749 CTXN2P0C2S0 81 aa4.27□□□□□ -1.73
EPHA4-204ENST00000415749 SFTA3P0C7M3 94 aa4.27□□□□□ -1.73
EPHA4-204ENST00000415749 PSG2P11465 335 aa4.27□□□□□ -1.73
EPHA4-204ENST00000415749 SLC25A6P12236 298 aa4.27□□□□□ -1.73
EPHA4-204ENST00000415749 CCL3L1P16619 93 aa4.27□□□□□ -1.73
EPHA4-204ENST00000415749 CD24P25063 80 aa4.27□□□□□ -1.73
EPHA4-204ENST00000415749 RAB5CP51148 216 aa4.27□□□□□ -1.73
EPHA4-204ENST00000415749 FXYD4P59646 89 aa4.27□□□□□ -1.73
EPHA4-204ENST00000415749 CD164Q04900 197 aa4.27□□□□□ -1.73
EPHA4-204ENST00000415749 KIR2DS1Q14954 304 aa4.27□□□□□ -1.73
EPHA4-204ENST00000415749 ZNF818PQ6ZRF7 136 aa4.27□□□□□ -1.73
EPHA4-204ENST00000415749 SUMF2Q8NBJ7 301 aa4.27□□□□□ -1.73
EPHA4-204ENST00000415749 LFNGQ8NES3 379 aa4.27□□□□□ -1.73
EPHA4-204ENST00000415749 OR11H6Q8NGC7 330 aa4.27□□□□□ -1.73
EPHA4-204ENST00000415749 NARS2Q96I59 477 aaKnown RBP4.27□□□□□ -1.73
EPHA4-204ENST00000415749 YPEL4Q96NS1 127 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms