RNA–Protein interactions for RNA: ENST00000415620.1

LINC00428-201, long intergenic non-protein coding RNA 428, humanhuman

TSL 5 BASIC

Gene LINC00428, Length 227 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00428-201ENST00000415620 CRPP02741 224 aa0.95□□□□□ -2.26
LINC00428-201ENST00000415620 IL4P05112 153 aa0.95□□□□□ -2.26
LINC00428-201ENST00000415620 TRAPPC2P0DI81 140 aa0.95□□□□□ -2.26
LINC00428-201ENST00000415620 TRAPPC2BP0DI82 140 aa0.95□□□□□ -2.26
LINC00428-201ENST00000415620 SLC2A5P22732 501 aa0.95□□□□□ -2.26
LINC00428-201ENST00000415620 HLA-DMAP28067 261 aa0.95□□□□□ -2.26
LINC00428-201ENST00000415620 HRH1P35367 487 aa0.95□□□□□ -2.26
LINC00428-201ENST00000415620 GSSP48637 474 aa0.95□□□□□ -2.26
LINC00428-201ENST00000415620 SELENOWP63302 87 aa0.95□□□□□ -2.26
LINC00428-201ENST00000415620 TPM4P67936 248 aa0.95□□□□□ -2.26
LINC00428-201ENST00000415620 HLA-DRB3P79483 266 aa0.95□□□□□ -2.26
LINC00428-201ENST00000415620 C9orf116Q5BN46 136 aaPredicted RBP0.95□□□□□ -2.26
LINC00428-201ENST00000415620 HES5Q5TA89 166 aa0.95□□□□□ -2.26
LINC00428-201ENST00000415620 GLYATQ6IB77 296 aa0.95□□□□□ -2.26
LINC00428-201ENST00000415620 KCTD9Q7L273 389 aa0.95□□□□□ -2.26
LINC00428-201ENST00000415620 FUNDC1Q8IVP5 155 aa0.95□□□□□ -2.26
LINC00428-201ENST00000415620 C15orf54Q8N8G6 183 aa0.95□□□□□ -2.26
LINC00428-201ENST00000415620 SAMD12Q8N8I0 201 aa0.95□□□□□ -2.26
LINC00428-201ENST00000415620 SLC25A29Q8N8R3 303 aa0.95□□□□□ -2.26
LINC00428-201ENST00000415620 OR10P1Q8NGE3 313 aa0.95□□□□□ -2.26
LINC00428-201ENST00000415620 C20orf144Q9BQM9 153 aa0.95□□□□□ -2.26
LINC00428-201ENST00000415620 HDHD3Q9BSH5 251 aaPredicted RBP0.95□□□□□ -2.26
LINC00428-201ENST00000415620 TSSK6Q9BXA6 273 aa0.95□□□□□ -2.26
LINC00428-201ENST00000415620 PRRG3Q9BZD7 231 aa0.95□□□□□ -2.26
LINC00428-201ENST00000415620 YIPF3Q9GZM5 350 aa0.95□□□□□ -2.26
LINC00428-201ENST00000415620 ANKRD19PQ9H560 264 aa0.95□□□□□ -2.26
LINC00428-201ENST00000415620 SPACA1Q9HBV2 294 aa0.95□□□□□ -2.26
LINC00428-201ENST00000415620 NDUFA4L2Q9NRX3 87 aa0.95□□□□□ -2.26
LINC00428-201ENST00000415620 BET1LQ9NYM9 111 aa0.95□□□□□ -2.26
LINC00428-201ENST00000415620 LINC00474Q9P2X8 69 aa0.95□□□□□ -2.26
LINC00428-201ENST00000415620 ARL2BPQ9Y2Y0 163 aa0.95□□□□□ -2.26
LINC00428-201ENST00000415620 LRRC42Q9Y546 428 aa0.95□□□□□ -2.26
LINC00428-201ENST00000415620 LINC00854A0A1B0GVQ3 168 aa0.94□□□□□ -2.26
LINC00428-201ENST00000415620 PGPA6NDG6 321 aa0.94□□□□□ -2.26
LINC00428-201ENST00000415620 RIIAD1A6NNX1 92 aa0.94□□□□□ -2.26
LINC00428-201ENST00000415620 TNFRSF11BO00300 401 aa0.94□□□□□ -2.26
LINC00428-201ENST00000415620 IFNGP01579 166 aa0.94□□□□□ -2.26
LINC00428-201ENST00000415620 GLAP06280 429 aa0.94□□□□□ -2.26
LINC00428-201ENST00000415620 SEC11BP0C7V7 166 aa0.94□□□□□ -2.26
LINC00428-201ENST00000415620 UBCP0CG48 685 aaKnown RBP0.94□□□□□ -2.26
LINC00428-201ENST00000415620 LINC00694P0DN24 101 aa0.94□□□□□ -2.26
LINC00428-201ENST00000415620 CD37P11049 281 aa0.94□□□□□ -2.26
LINC00428-201ENST00000415620 GTF2F2P13984 249 aa0.94□□□□□ -2.26
LINC00428-201ENST00000415620 CELP19835 753 aa0.94□□□□□ -2.26
LINC00428-201ENST00000415620 NPBWR1P48145 328 aa0.94□□□□□ -2.26
LINC00428-201ENST00000415620 TAS2R43P59537 309 aa0.94□□□□□ -2.26
LINC00428-201ENST00000415620 TSPAN31Q12999 210 aa0.94□□□□□ -2.26
LINC00428-201ENST00000415620 MPV17L2Q567V2 206 aa0.94□□□□□ -2.26
LINC00428-201ENST00000415620 ERICH5Q6P6B1 374 aa0.94□□□□□ -2.26
LINC00428-201ENST00000415620 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa0.94□□□□□ -2.26
LINC00428-201ENST00000415620 C6orf201Q7Z4U5 140 aa0.94□□□□□ -2.26
LINC00428-201ENST00000415620 C3orf22Q8N5N4 141 aa0.94□□□□□ -2.26
LINC00428-201ENST00000415620 EIF1ADQ8N9N8 165 aaKnown RBP0.94□□□□□ -2.26
LINC00428-201ENST00000415620 OR8A1Q8NGG7 326 aa0.94□□□□□ -2.26
LINC00428-201ENST00000415620 OR10G9Q8NGN4 311 aa0.94□□□□□ -2.26
LINC00428-201ENST00000415620 OR8J1Q8NGP2 316 aa0.94□□□□□ -2.26
LINC00428-201ENST00000415620 OR1P1Q8NH06 330 aa0.94□□□□□ -2.26
LINC00428-201ENST00000415620 OR4S2Q8NH73 311 aa0.94□□□□□ -2.26
LINC00428-201ENST00000415620 LSM10Q969L4 123 aaKnown RBP0.94□□□□□ -2.26
LINC00428-201ENST00000415620 CENPNQ96H22 339 aaPredicted RBP0.94□□□□□ -2.26
LINC00428-201ENST00000415620 ADTRPQ96IZ2 230 aa0.94□□□□□ -2.26
LINC00428-201ENST00000415620 ALKBH7Q9BT30 221 aaPredicted RBP0.94□□□□□ -2.26
LINC00428-201ENST00000415620 FAAP24Q9BTP7 215 aa0.94□□□□□ -2.26
LINC00428-201ENST00000415620 METTL9Q9H1A3 318 aa0.94□□□□□ -2.26
LINC00428-201ENST00000415620 BANF2Q9H503 90 aa0.94□□□□□ -2.26
LINC00428-201ENST00000415620 CMC2Q9NRP2 79 aa0.94□□□□□ -2.26
LINC00428-201ENST00000415620 IL20Q9NYY1 176 aa0.94□□□□□ -2.26
LINC00428-201ENST00000415620 SYNE1Q8NF91 8797 aaKnown RBP0.94□□□□□ -2.26
LINC00428-201ENST00000415620 A0A075B6Q4 140 aa0.93□□□□□ -2.26
LINC00428-201ENST00000415620 TRAV4A0A0B4J268 109 aa0.93□□□□□ -2.26
LINC00428-201ENST00000415620 CCDC182A6NF36 153 aa0.93□□□□□ -2.26
LINC00428-201ENST00000415620 FABP12A6NFH5 140 aa0.93□□□□□ -2.26
LINC00428-201ENST00000415620 COPEO14579 308 aa0.93□□□□□ -2.26
LINC00428-201ENST00000415620 PDCD6O75340 191 aa0.93□□□□□ -2.26
LINC00428-201ENST00000415620 SPAG7O75391 227 aa0.93□□□□□ -2.26
LINC00428-201ENST00000415620 SERF1AO75920 110 aa0.93□□□□□ -2.26
LINC00428-201ENST00000415620 LALBAP00709 142 aa0.93□□□□□ -2.26
LINC00428-201ENST00000415620 ANGP03950 147 aaKnown RBP0.93□□□□□ -2.26
LINC00428-201ENST00000415620 ATP6V1B2P21281 511 aa0.93□□□□□ -2.26
LINC00428-201ENST00000415620 RPL14P50914 215 aaKnown RBP0.93□□□□□ -2.26
LINC00428-201ENST00000415620 RAB5CP51148 216 aa0.93□□□□□ -2.26
LINC00428-201ENST00000415620 UBE2D3P61077 147 aa0.93□□□□□ -2.26
LINC00428-201ENST00000415620 STX1BP61266 288 aa0.93□□□□□ -2.26
LINC00428-201ENST00000415620 MEF2BQ02080 365 aaPredicted RBP0.93□□□□□ -2.26
LINC00428-201ENST00000415620 ELOBQ15370 118 aa0.93□□□□□ -2.26
LINC00428-201ENST00000415620 MIAQ16674 131 aa0.93□□□□□ -2.26
LINC00428-201ENST00000415620 ZNF674Q2M3X9 581 aa0.93□□□□□ -2.26
LINC00428-201ENST00000415620 THOC7Q6I9Y2 204 aaKnown RBP0.93□□□□□ -2.26
LINC00428-201ENST00000415620 EIF5AL1Q6IS14 154 aaKnown RBP0.93□□□□□ -2.26
LINC00428-201ENST00000415620 LHFPL3Q86UP9 236 aa0.93□□□□□ -2.26
LINC00428-201ENST00000415620 SYS1Q8N2H4 156 aa0.93□□□□□ -2.26
LINC00428-201ENST00000415620 ARRDC1Q8N5I2 433 aa0.93□□□□□ -2.26
LINC00428-201ENST00000415620 EIF4E3Q8N5X7 224 aaKnown RBP0.93□□□□□ -2.26
LINC00428-201ENST00000415620 CYB561D1Q8N8Q1 229 aa0.93□□□□□ -2.26
LINC00428-201ENST00000415620 ZNF738Q8NE65 137 aa0.93□□□□□ -2.26
LINC00428-201ENST00000415620 CCDC54Q8NEL0 328 aa0.93□□□□□ -2.26
LINC00428-201ENST00000415620 OR2T33Q8NG76 320 aa0.93□□□□□ -2.26
LINC00428-201ENST00000415620 OR4C5Q8NGB2 326 aa0.93□□□□□ -2.26
LINC00428-201ENST00000415620 OR51G1Q8NGK1 321 aa0.93□□□□□ -2.26
LINC00428-201ENST00000415620 LGALS14Q8TCE9 139 aa0.93□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms