RNA–Protein interactions for RNA: ENST00000414786.6

SHANK3-202, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

TSL 5

Gene SHANK3, Length 7,394 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-202ENST00000414786 A0A1B0GTI1 187 aa14.95□□□□□ -0.02
SHANK3-202ENST00000414786 PCNX2A6NKB5 2137 aa14.95□□□□□ -0.02
SHANK3-202ENST00000414786 GREM1O60565 184 aa14.95□□□□□ -0.02
SHANK3-202ENST00000414786 ZC2HC1BQ5TFG8 222 aa14.95□□□□□ -0.02
SHANK3-202ENST00000414786 IGLV3-21P80748 117 aaPredicted RBP14.94□□□□□ -0.02
SHANK3-202ENST00000414786 ALS2Q96Q42 1657 aa14.94□□□□□ -0.02
SHANK3-202ENST00000414786 GNB1LQ9BYB4 327 aa14.94□□□□□ -0.02
SHANK3-202ENST00000414786 TEX36Q5VZQ5 186 aa14.94□□□□□ -0.02
SHANK3-202ENST00000414786 ZNF581Q9P0T4 197 aa14.93□□□□□ -0.02
SHANK3-202ENST00000414786 GREB1Q4ZG55 1949 aa14.93□□□□□ -0.02
SHANK3-202ENST00000414786 KIR3DS1Q14943 382 aa14.93□□□□□ -0.02
SHANK3-202ENST00000414786 C8orf31Q8N9H6 132 aa14.93□□□□□ -0.02
SHANK3-202ENST00000414786 IGKV1-16P04430 117 aa14.92□□□□□ -0.02
SHANK3-202ENST00000414786 A0A1B0GUS0 222 aa14.92□□□□□ -0.02
SHANK3-202ENST00000414786 MAJINQ3KP22 176 aa14.92□□□□□ -0.02
SHANK3-202ENST00000414786 HEPN1Q6WQI6 88 aa14.92□□□□□ -0.02
SHANK3-202ENST00000414786 UBE2AP49459 152 aa14.92□□□□□ -0.02
SHANK3-202ENST00000414786 NRGNQ92686 78 aa14.92□□□□□ -0.02
SHANK3-202ENST00000414786 PLSCR4Q9NRQ2 329 aa14.92□□□□□ -0.02
SHANK3-202ENST00000414786 IGKV1-12A0A0C4DH73 117 aa14.91□□□□□ -0.02
SHANK3-202ENST00000414786 RNF126Q9BV68 326 aa14.91□□□□□ -0.02
SHANK3-202ENST00000414786 GLRX5Q86SX6 157 aa14.91□□□□□ -0.02
SHANK3-202ENST00000414786 VWCEQ96DN2 955 aa14.91□□□□□ -0.02
SHANK3-202ENST00000414786 SRSF8Q9BRL6 282 aaKnown RBP14.91□□□□□ -0.02
SHANK3-202ENST00000414786 M0R1W7 72 aa14.91□□□□□ -0.02
SHANK3-202ENST00000414786 ADAMTSL5Q6ZMM2 481 aa14.91□□□□□ -0.02
SHANK3-202ENST00000414786 WFDC9Q8NEX5 89 aa14.91□□□□□ -0.02
SHANK3-202ENST00000414786 OVOL2Q9BRP0 275 aa14.91□□□□□ -0.02
SHANK3-202ENST00000414786 UBL5Q9BZL1 73 aa14.91□□□□□ -0.02
SHANK3-202ENST00000414786 C5orf63A6NC05 138 aa14.91□□□□□ -0.02
SHANK3-202ENST00000414786 LINC00473A8K010 186 aa14.91□□□□□ -0.02
SHANK3-202ENST00000414786 ID3Q02535 119 aa14.91□□□□□ -0.02
SHANK3-202ENST00000414786 CD200R1LQ6Q8B3 271 aa14.91□□□□□ -0.02
SHANK3-202ENST00000414786 RNF183Q96D59 192 aa14.91□□□□□ -0.02
SHANK3-202ENST00000414786 PLCE1Q9P212 2302 aa14.9□□□□□ -0.02
SHANK3-202ENST00000414786 PATJQ8NI35 1801 aa14.9□□□□□ -0.02
SHANK3-202ENST00000414786 NTF4P34130 210 aa14.9□□□□□ -0.02
SHANK3-202ENST00000414786 ZNF362Q5T0B9 420 aaPredicted RBP14.9□□□□□ -0.02
SHANK3-202ENST00000414786 I3L3M4 83 aa14.9□□□□□ -0.02
SHANK3-202ENST00000414786 NDUFB8O95169 186 aa14.9□□□□□ -0.02
SHANK3-202ENST00000414786 IGHV1-69DA0A0B4J2H0 117 aa14.9□□□□□ -0.02
SHANK3-202ENST00000414786 IGHV1-69P01742 117 aa14.9□□□□□ -0.02
SHANK3-202ENST00000414786 IGKV2D-29A0A075B6S2 120 aaPredicted RBP14.9□□□□□ -0.02
SHANK3-202ENST00000414786 IGKV2-29A2NJV5 120 aaPredicted RBP14.9□□□□□ -0.02
SHANK3-202ENST00000414786 CXCL1P09341 107 aa14.9□□□□□ -0.02
SHANK3-202ENST00000414786 FANCD2OSQ96PS1 177 aa14.9□□□□□ -0.02
SHANK3-202ENST00000414786 C5orf38Q86SI9 138 aa14.89□□□□□ -0.03
SHANK3-202ENST00000414786 ETDCA0A1B0GVM5 59 aa14.89□□□□□ -0.03
SHANK3-202ENST00000414786 NPBQ8NG41 125 aa14.89□□□□□ -0.03
SHANK3-202ENST00000414786 PIFOQ8TCI5 191 aa14.89□□□□□ -0.03
SHANK3-202ENST00000414786 HEATR5AQ86XA9 2040 aa14.89□□□□□ -0.03
SHANK3-202ENST00000414786 IL18BPO95998 194 aa14.89□□□□□ -0.03
SHANK3-202ENST00000414786 AGMATQ9BSE5 352 aa14.89□□□□□ -0.03
SHANK3-202ENST00000414786 SVIPQ8NHG7 77 aa14.89□□□□□ -0.03
SHANK3-202ENST00000414786 RNF222A6NCQ9 220 aa14.89□□□□□ -0.03
SHANK3-202ENST00000414786 IGKV1-27A0A075B6S5 117 aa14.88□□□□□ -0.03
SHANK3-202ENST00000414786 INAFM2P0DMQ5 153 aa14.88□□□□□ -0.03
SHANK3-202ENST00000414786 GGNQ86UU5 652 aa14.88□□□□□ -0.03
SHANK3-202ENST00000414786 ZGRF1Q86YA3 2104 aa14.88□□□□□ -0.03
SHANK3-202ENST00000414786 DUX4L9Q6RFH8 374 aaPredicted RBP14.88□□□□□ -0.03
SHANK3-202ENST00000414786 TRGV9Q99603 122 aa14.88□□□□□ -0.03
SHANK3-202ENST00000414786 CARHSP1Q9Y2V2 147 aaKnown RBP14.88□□□□□ -0.03
SHANK3-202ENST00000414786 PTPRDP23468 1912 aa14.88□□□□□ -0.03
SHANK3-202ENST00000414786 LOC105371267A0A1B0GV96 52 aa14.88□□□□□ -0.03
SHANK3-202ENST00000414786 ZFP36L1Q07352 338 aaKnown RBP14.88□□□□□ -0.03
SHANK3-202ENST00000414786 C8orf86Q6ZUL3 223 aa14.88□□□□□ -0.03
SHANK3-202ENST00000414786 HIST1H2BKO60814 126 aa14.87□□□□□ -0.03
SHANK3-202ENST00000414786 HIST1H2BJP06899 126 aa14.87□□□□□ -0.03
SHANK3-202ENST00000414786 HIST1H2BOP23527 126 aa14.87□□□□□ -0.03
SHANK3-202ENST00000414786 HIST1H2BBP33778 126 aa14.87□□□□□ -0.03
SHANK3-202ENST00000414786 HIST1H2BDP58876 126 aa14.87□□□□□ -0.03
SHANK3-202ENST00000414786 HIST1H2BCP62807 126 aa14.87□□□□□ -0.03
SHANK3-202ENST00000414786 HIST2H2BEQ16778 126 aa14.87□□□□□ -0.03
SHANK3-202ENST00000414786 HIST2H2BFQ5QNW6 126 aaPredicted RBP14.87□□□□□ -0.03
SHANK3-202ENST00000414786 HIST1H2BHQ93079 126 aa14.87□□□□□ -0.03
SHANK3-202ENST00000414786 HIST1H2BNQ99877 126 aa14.87□□□□□ -0.03
SHANK3-202ENST00000414786 HIST1H2BMQ99879 126 aa14.87□□□□□ -0.03
SHANK3-202ENST00000414786 A0A087WWC5 75 aa14.87□□□□□ -0.03
SHANK3-202ENST00000414786 LY75O60449 1722 aa14.87□□□□□ -0.03
SHANK3-202ENST00000414786 FBLIM1Q8WUP2 373 aa14.87□□□□□ -0.03
SHANK3-202ENST00000414786 IGHV4OR15-8A0A075B7B6 117 aa14.87□□□□□ -0.03
SHANK3-202ENST00000414786 A0A087WW49 117 aa14.87□□□□□ -0.03
SHANK3-202ENST00000414786 LINC00271P0C7V0 271 aa14.87□□□□□ -0.03
SHANK3-202ENST00000414786 RBM3P98179 157 aaKnown RBP14.87□□□□□ -0.03
SHANK3-202ENST00000414786 SEM1Q6ZVN7 128 aa14.87□□□□□ -0.03
SHANK3-202ENST00000414786 LMO1P25800 156 aa14.87□□□□□ -0.03
SHANK3-202ENST00000414786 MRPS18CQ9Y3D5 142 aaKnown RBP14.87□□□□□ -0.03
SHANK3-202ENST00000414786 C1orf43Q9BWL3 253 aa14.87□□□□□ -0.03
SHANK3-202ENST00000414786 SRRM5B3KS81 715 aa14.86□□□□□ -0.03
SHANK3-202ENST00000414786 F6UB75 175 aa14.86□□□□□ -0.03
SHANK3-202ENST00000414786 IGKV1D-17A0A075B6S4 117 aa14.86□□□□□ -0.03
SHANK3-202ENST00000414786 IGLL5B9A064 214 aa14.86□□□□□ -0.03
SHANK3-202ENST00000414786 WISP3O95389 354 aaPredicted RBP14.86□□□□□ -0.03
SHANK3-202ENST00000414786 REG4Q9BYZ8 158 aa14.86□□□□□ -0.03
SHANK3-202ENST00000414786 IGHV1OR15-1A0A075B7D0 117 aa14.86□□□□□ -0.03
SHANK3-202ENST00000414786 GTSF1Q8WW33 167 aa14.86□□□□□ -0.03
SHANK3-202ENST00000414786 NEUROG3Q9Y4Z2 214 aa14.85□□□□□ -0.03
SHANK3-202ENST00000414786 DOCK4Q8N1I0 1966 aa14.85□□□□□ -0.03
SHANK3-202ENST00000414786 TM2D2Q9BX73 214 aa14.85□□□□□ -0.03
SHANK3-202ENST00000414786 ATRXP46100 2492 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms