RNA–Protein interactions for RNA: ENST00000413642.7

VEGFA-207, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,197 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-207ENST00000413642 KIR3DS1Q14943 382 aa18.74■□□□□ 0.59
VEGFA-207ENST00000413642 PYYP10082 97 aa18.73■□□□□ 0.59
VEGFA-207ENST00000413642 NIPSNAP3BQ9BS92 247 aa18.73■□□□□ 0.59
VEGFA-207ENST00000413642 WDR61Q9GZS3 305 aaKnown RBP18.73■□□□□ 0.59
VEGFA-207ENST00000413642 GUK1Q16774 197 aa18.72■□□□□ 0.59
VEGFA-207ENST00000413642 LINC01587Q99440 93 aa18.72■□□□□ 0.59
VEGFA-207ENST00000413642 BIRC6Q9NR09 4857 aa18.71■□□□□ 0.59
VEGFA-207ENST00000413642 TRBV19A0A075B6N1 114 aa18.71■□□□□ 0.59
VEGFA-207ENST00000413642 NDUFB4O95168 129 aa18.71■□□□□ 0.59
VEGFA-207ENST00000413642 MIR17HGQ75NE6 70 aa18.71■□□□□ 0.59
VEGFA-207ENST00000413642 SLC25A2Q9BXI2 301 aa18.71■□□□□ 0.59
VEGFA-207ENST00000413642 TMEM14CQ9P0S9 112 aa18.71■□□□□ 0.59
VEGFA-207ENST00000413642 ALG5Q9Y673 324 aa18.71■□□□□ 0.59
VEGFA-207ENST00000413642 HTN3P15516 51 aa18.7■□□□□ 0.58
VEGFA-207ENST00000413642 CDKN1BP46527 198 aa18.7■□□□□ 0.58
VEGFA-207ENST00000413642 OR10J6PQ8NGY7 276 aa18.7■□□□□ 0.58
VEGFA-207ENST00000413642 SMIM3Q9BZL3 60 aa18.7■□□□□ 0.58
VEGFA-207ENST00000413642 M0R3E3 92 aa18.69■□□□□ 0.58
VEGFA-207ENST00000413642 HIST1H1EP10412 219 aaKnown RBP18.69■□□□□ 0.58
VEGFA-207ENST00000413642 HTN1P15515 57 aa18.69■□□□□ 0.58
VEGFA-207ENST00000413642 BLNKQ8WV28 456 aa18.69■□□□□ 0.58
VEGFA-207ENST00000413642 FAM167A-AS1Q96KT0 104 aa18.69■□□□□ 0.58
VEGFA-207ENST00000413642 MBD2Q9UBB5 411 aa18.69■□□□□ 0.58
VEGFA-207ENST00000413642 HSPB11Q9Y547 144 aa18.69■□□□□ 0.58
VEGFA-207ENST00000413642 TEX48A0A1B0GUV7 120 aa18.68■□□□□ 0.58
VEGFA-207ENST00000413642 PLAC8L1A1L4L8 177 aa18.68■□□□□ 0.58
VEGFA-207ENST00000413642 FCN2Q15485 313 aa18.68■□□□□ 0.58
VEGFA-207ENST00000413642 ATP5SQ99766 215 aa18.68■□□□□ 0.58
VEGFA-207ENST00000413642 J3KRW8 73 aa18.67■□□□□ 0.58
VEGFA-207ENST00000413642 ZNF253O75346 499 aa18.67■□□□□ 0.58
VEGFA-207ENST00000413642 CT45A10P0DMU9 189 aa18.67■□□□□ 0.58
VEGFA-207ENST00000413642 RPL12P30050 165 aaKnown RBP18.67■□□□□ 0.58
VEGFA-207ENST00000413642 EXOC3-AS1Q8N2X6 119 aa18.67■□□□□ 0.58
VEGFA-207ENST00000413642 NDUFAF3Q9BU61 184 aa18.67■□□□□ 0.58
VEGFA-207ENST00000413642 TIMM9Q9Y5J7 89 aa18.67■□□□□ 0.58
VEGFA-207ENST00000413642 VPS13DQ5THJ4 4388 aa18.67■□□□□ 0.58
VEGFA-207ENST00000413642 DAD1P61803 113 aa18.66■□□□□ 0.58
VEGFA-207ENST00000413642 OXA1LQ15070 435 aa18.66■□□□□ 0.58
VEGFA-207ENST00000413642 NPIPB6E9PJ23 425 aa18.65■□□□□ 0.58
VEGFA-207ENST00000413642 TSPOP30536 169 aa18.65■□□□□ 0.58
VEGFA-207ENST00000413642 TAS2R60P59551 318 aa18.65■□□□□ 0.58
VEGFA-207ENST00000413642 ERCC8Q13216 396 aa18.65■□□□□ 0.58
VEGFA-207ENST00000413642 GFI1BQ5VTD9 330 aa18.65■□□□□ 0.58
VEGFA-207ENST00000413642 TMEM256Q8N2U0 113 aa18.65■□□□□ 0.58
VEGFA-207ENST00000413642 WFDC1Q9HC57 220 aa18.65■□□□□ 0.58
VEGFA-207ENST00000413642 PET100P0DJ07 73 aa18.64■□□□□ 0.57
VEGFA-207ENST00000413642 C17orf112F2Z3M2 114 aa18.63■□□□□ 0.57
VEGFA-207ENST00000413642 DEFB130BP0DP73 79 aa18.63■□□□□ 0.57
VEGFA-207ENST00000413642 DEFB130AP0DP74 79 aa18.63■□□□□ 0.57
VEGFA-207ENST00000413642 OR10J4P0C629 311 aa18.62■□□□□ 0.57
VEGFA-207ENST00000413642 ICAM4Q14773 271 aa18.62■□□□□ 0.57
VEGFA-207ENST00000413642 MRPL53Q96EL3 112 aaKnown RBP18.62■□□□□ 0.57
VEGFA-207ENST00000413642 OR51M1Q9H341 326 aa18.62■□□□□ 0.57
VEGFA-207ENST00000413642 KCNIP2Q9NS61 270 aa18.62■□□□□ 0.57
VEGFA-207ENST00000413642 FUT9Q9Y231 359 aa18.62■□□□□ 0.57
VEGFA-207ENST00000413642 KMT2AQ03164 3969 aa18.62■□□□□ 0.57
VEGFA-207ENST00000413642 LYRM9A8MSI8 78 aa18.61■□□□□ 0.57
VEGFA-207ENST00000413642 EIF3GO75821 320 aaKnown RBP eCLIP18.61■□□□□ 0.57
VEGFA-207ENST00000413642 PTTG1O95997 202 aa18.61■□□□□ 0.57
VEGFA-207ENST00000413642 NBEAP1P0C6P0 100 aa18.61■□□□□ 0.57
VEGFA-207ENST00000413642 PDE6HQ13956 83 aa18.61■□□□□ 0.57
VEGFA-207ENST00000413642 FFAR4Q5NUL3 377 aa18.61■□□□□ 0.57
VEGFA-207ENST00000413642 FXYD5Q96DB9 178 aa18.61■□□□□ 0.57
VEGFA-207ENST00000413642 MRPL32Q9BYC8 188 aaKnown RBP18.61■□□□□ 0.57
VEGFA-207ENST00000413642 TRAV12-3A0A0B4J271 114 aa18.6■□□□□ 0.57
VEGFA-207ENST00000413642 H7BYZ3 331 aa18.6■□□□□ 0.57
VEGFA-207ENST00000413642 IFNA5P01569 189 aa18.6■□□□□ 0.57
VEGFA-207ENST00000413642 LEPP41159 167 aa18.6■□□□□ 0.57
VEGFA-207ENST00000413642 FAM122CQ6P4D5 195 aa18.6■□□□□ 0.57
VEGFA-207ENST00000413642 SCGB1C1Q8TD33 95 aa18.6■□□□□ 0.57
VEGFA-207ENST00000413642 ZNF503Q96F45 646 aa18.6■□□□□ 0.57
VEGFA-207ENST00000413642 PAXXQ9BUH6 204 aa18.6■□□□□ 0.57
VEGFA-207ENST00000413642 AGPAT4-IT1Q9H0P7 198 aa18.6■□□□□ 0.57
VEGFA-207ENST00000413642 TMEM88Q6PEY1 159 aa18.59■□□□□ 0.57
VEGFA-207ENST00000413642 RNASE8Q8TDE3 154 aaKnown RBP18.59■□□□□ 0.57
VEGFA-207ENST00000413642 RNF141Q8WVD5 230 aa18.59■□□□□ 0.57
VEGFA-207ENST00000413642 C16orf74Q96GX8 76 aa18.59■□□□□ 0.57
VEGFA-207ENST00000413642 ODF3Q96PU9 254 aa18.59■□□□□ 0.57
VEGFA-207ENST00000413642 PRELID1Q9Y255 219 aa18.59■□□□□ 0.57
VEGFA-207ENST00000413642 IGKV2-40A0A087WW87 121 aaPredicted RBP18.58■□□□□ 0.56
VEGFA-207ENST00000413642 IGKV2D-40P01614 121 aaPredicted RBP18.58■□□□□ 0.56
VEGFA-207ENST00000413642 PHYHIPLQ96FC7 376 aa18.58■□□□□ 0.56
VEGFA-207ENST00000413642 C20orf144Q9BQM9 153 aa18.58■□□□□ 0.56
VEGFA-207ENST00000413642 FAM210BQ96KR6 192 aa18.57■□□□□ 0.56
VEGFA-207ENST00000413642 MED28Q9H204 178 aa18.57■□□□□ 0.56
VEGFA-207ENST00000413642 AAMDCQ9H7C9 122 aa18.57■□□□□ 0.56
VEGFA-207ENST00000413642 NOP10Q9NPE3 64 aaKnown RBP18.57■□□□□ 0.56
VEGFA-207ENST00000413642 OR7C2O60412 319 aa18.56■□□□□ 0.56
VEGFA-207ENST00000413642 P0DMU3 169 aa18.56■□□□□ 0.56
VEGFA-207ENST00000413642 FAM231AP0DMU4 169 aa18.56■□□□□ 0.56
VEGFA-207ENST00000413642 FAM231CP0DMU5 169 aa18.56■□□□□ 0.56
VEGFA-207ENST00000413642 POM121L12Q8N7R1 296 aa18.56■□□□□ 0.56
VEGFA-207ENST00000413642 TMEM263Q8WUH6 116 aaKnown RBP18.56■□□□□ 0.56
VEGFA-207ENST00000413642 VGLL1Q99990 258 aa18.56■□□□□ 0.56
VEGFA-207ENST00000413642 CD300CQ08708 224 aa18.55■□□□□ 0.56
VEGFA-207ENST00000413642 Q5BKY6 102 aa18.55■□□□□ 0.56
VEGFA-207ENST00000413642 ZNF493Q6ZR52 646 aa18.55■□□□□ 0.56
VEGFA-207ENST00000413642 FAM19A4Q96LR4 140 aa18.55■□□□□ 0.56
VEGFA-207ENST00000413642 LINC00477Q96M19 166 aa18.55■□□□□ 0.56
VEGFA-207ENST00000413642 TIMM8BQ9Y5J9 83 aaPredicted RBP18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 196 ms