RNA–Protein interactions for RNA: ENST00000413374.1

NCKIPSD-202, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 725 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-202ENST00000413374 AMBPP02760 352 aa7.26□□□□□ -1.25
NCKIPSD-202ENST00000413374 PYYP10082 97 aa7.26□□□□□ -1.25
NCKIPSD-202ENST00000413374 CXCL2P19875 107 aa7.26□□□□□ -1.25
NCKIPSD-202ENST00000413374 MIR17HGQ75NE6 70 aa7.26□□□□□ -1.25
NCKIPSD-202ENST00000413374 OR10J6PQ8NGY7 276 aa7.26□□□□□ -1.25
NCKIPSD-202ENST00000413374 BLNKQ8WV28 456 aa7.26□□□□□ -1.25
NCKIPSD-202ENST00000413374 SAT2Q96F10 170 aaPredicted RBP7.26□□□□□ -1.25
NCKIPSD-202ENST00000413374 PFDN5Q99471 154 aa7.26□□□□□ -1.25
NCKIPSD-202ENST00000413374 SLC50A1Q9BRV3 221 aa7.26□□□□□ -1.25
NCKIPSD-202ENST00000413374 NIPSNAP3BQ9BS92 247 aa7.26□□□□□ -1.25
NCKIPSD-202ENST00000413374 NPCDR1Q9BY65 106 aa7.26□□□□□ -1.25
NCKIPSD-202ENST00000413374 SMIM3Q9BZL3 60 aa7.26□□□□□ -1.25
NCKIPSD-202ENST00000413374 DNAH10Q8IVF4 4471 aa7.25□□□□□ -1.25
NCKIPSD-202ENST00000413374 MPC2O95563 127 aa7.25□□□□□ -1.25
NCKIPSD-202ENST00000413374 TCTAP57738 103 aa7.25□□□□□ -1.25
NCKIPSD-202ENST00000413374 ERCC8Q13216 396 aa7.25□□□□□ -1.25
NCKIPSD-202ENST00000413374 CHAC2Q8WUX2 184 aa7.25□□□□□ -1.25
NCKIPSD-202ENST00000413374 WDR61Q9GZS3 305 aaKnown RBP7.25□□□□□ -1.25
NCKIPSD-202ENST00000413374 TIMM9Q9Y5J7 89 aa7.25□□□□□ -1.25
NCKIPSD-202ENST00000413374 TRBV19A0A075B6N1 114 aa7.24□□□□□ -1.25
NCKIPSD-202ENST00000413374 M0R3E3 92 aa7.24□□□□□ -1.25
NCKIPSD-202ENST00000413374 MPDU1O75352 247 aa7.24□□□□□ -1.25
NCKIPSD-202ENST00000413374 EIF3GO75821 320 aaKnown RBP eCLIP7.24□□□□□ -1.25
NCKIPSD-202ENST00000413374 CT45A10P0DMU9 189 aa7.24□□□□□ -1.25
NCKIPSD-202ENST00000413374 DEFB130BP0DP73 79 aa7.24□□□□□ -1.25
NCKIPSD-202ENST00000413374 DEFB130AP0DP74 79 aa7.24□□□□□ -1.25
NCKIPSD-202ENST00000413374 CDKN1BP46527 198 aa7.24□□□□□ -1.25
NCKIPSD-202ENST00000413374 DAD1P61803 113 aa7.24□□□□□ -1.25
NCKIPSD-202ENST00000413374 GUK1Q16774 197 aa7.24□□□□□ -1.25
NCKIPSD-202ENST00000413374 EXOC3-AS1Q8N2X6 119 aa7.24□□□□□ -1.25
NCKIPSD-202ENST00000413374 NDUFAF3Q9BU61 184 aa7.24□□□□□ -1.25
NCKIPSD-202ENST00000413374 SLC25A2Q9BXI2 301 aa7.24□□□□□ -1.25
NCKIPSD-202ENST00000413374 ALG5Q9Y673 324 aa7.24□□□□□ -1.25
NCKIPSD-202ENST00000413374 NDUFB4O95168 129 aa7.23□□□□□ -1.25
NCKIPSD-202ENST00000413374 HIST1H1EP10412 219 aaKnown RBP7.23□□□□□ -1.25
NCKIPSD-202ENST00000413374 RPL12P30050 165 aaKnown RBP7.23□□□□□ -1.25
NCKIPSD-202ENST00000413374 ATP5SQ99766 215 aa7.23□□□□□ -1.25
NCKIPSD-202ENST00000413374 WFDC1Q9HC57 220 aa7.23□□□□□ -1.25
NCKIPSD-202ENST00000413374 TMEM14CQ9P0S9 112 aa7.23□□□□□ -1.25
NCKIPSD-202ENST00000413374 MBD2Q9UBB5 411 aa7.23□□□□□ -1.25
NCKIPSD-202ENST00000413374 HSPB11Q9Y547 144 aa7.23□□□□□ -1.25
NCKIPSD-202ENST00000413374 TRAV12-3A0A0B4J271 114 aa7.22□□□□□ -1.25
NCKIPSD-202ENST00000413374 C17orf112F2Z3M2 114 aa7.22□□□□□ -1.25
NCKIPSD-202ENST00000413374 OR10J4P0C629 311 aa7.22□□□□□ -1.25
NCKIPSD-202ENST00000413374 TAS2R60P59551 318 aa7.22□□□□□ -1.25
NCKIPSD-202ENST00000413374 ICAM4Q14773 271 aa7.22□□□□□ -1.25
NCKIPSD-202ENST00000413374 FFAR4Q5NUL3 377 aa7.22□□□□□ -1.25
NCKIPSD-202ENST00000413374 GFI1BQ5VTD9 330 aa7.22□□□□□ -1.25
NCKIPSD-202ENST00000413374 FAM122CQ6P4D5 195 aa7.22□□□□□ -1.25
NCKIPSD-202ENST00000413374 SCGB1C1Q8TD33 95 aa7.22□□□□□ -1.25
NCKIPSD-202ENST00000413374 FAM167A-AS1Q96KT0 104 aa7.22□□□□□ -1.25
NCKIPSD-202ENST00000413374 OR51M1Q9H341 326 aa7.22□□□□□ -1.25
NCKIPSD-202ENST00000413374 TEX48A0A1B0GUV7 120 aa7.21□□□□□ -1.26
NCKIPSD-202ENST00000413374 PLAC8L1A1L4L8 177 aa7.21□□□□□ -1.26
NCKIPSD-202ENST00000413374 NPIPB6E9PJ23 425 aa7.21□□□□□ -1.26
NCKIPSD-202ENST00000413374 M0R2N4 97 aa7.21□□□□□ -1.26
NCKIPSD-202ENST00000413374 IFNA5P01569 189 aa7.21□□□□□ -1.26
NCKIPSD-202ENST00000413374 NBEAP1P0C6P0 100 aa7.21□□□□□ -1.26
NCKIPSD-202ENST00000413374 PET100P0DJ07 73 aa7.21□□□□□ -1.26
NCKIPSD-202ENST00000413374 TSPOP30536 169 aa7.21□□□□□ -1.26
NCKIPSD-202ENST00000413374 LEPP41159 167 aa7.21□□□□□ -1.26
NCKIPSD-202ENST00000413374 TMEM88Q6PEY1 159 aa7.21□□□□□ -1.26
NCKIPSD-202ENST00000413374 RNF141Q8WVD5 230 aa7.21□□□□□ -1.26
NCKIPSD-202ENST00000413374 PAXXQ9BUH6 204 aa7.21□□□□□ -1.26
NCKIPSD-202ENST00000413374 AGPAT4-IT1Q9H0P7 198 aa7.21□□□□□ -1.26
NCKIPSD-202ENST00000413374 NOP10Q9NPE3 64 aaKnown RBP7.21□□□□□ -1.26
NCKIPSD-202ENST00000413374 FUT9Q9Y231 359 aa7.21□□□□□ -1.26
NCKIPSD-202ENST00000413374 IGKV2-40A0A087WW87 121 aaPredicted RBP7.2□□□□□ -1.26
NCKIPSD-202ENST00000413374 LYRM9A8MSI8 78 aa7.2□□□□□ -1.26
NCKIPSD-202ENST00000413374 F5H768 121 aa7.2□□□□□ -1.26
NCKIPSD-202ENST00000413374 H7BYZ3 331 aa7.2□□□□□ -1.26
NCKIPSD-202ENST00000413374 OR7C2O60412 319 aa7.2□□□□□ -1.26
NCKIPSD-202ENST00000413374 ZNF253O75346 499 aa7.2□□□□□ -1.26
NCKIPSD-202ENST00000413374 IGKV2D-40P01614 121 aaPredicted RBP7.2□□□□□ -1.26
NCKIPSD-202ENST00000413374 RNASE4P34096 147 aaKnown RBP7.2□□□□□ -1.26
NCKIPSD-202ENST00000413374 RANP62826 216 aaKnown RBP7.2□□□□□ -1.26
NCKIPSD-202ENST00000413374 OXA1LQ15070 435 aa7.2□□□□□ -1.26
NCKIPSD-202ENST00000413374 CCDC28AQ8IWP9 274 aa7.2□□□□□ -1.26
NCKIPSD-202ENST00000413374 TMEM256Q8N2U0 113 aa7.2□□□□□ -1.26
NCKIPSD-202ENST00000413374 C16orf74Q96GX8 76 aa7.2□□□□□ -1.26
NCKIPSD-202ENST00000413374 VGLL1Q99990 258 aa7.2□□□□□ -1.26
NCKIPSD-202ENST00000413374 MED28Q9H204 178 aa7.2□□□□□ -1.26
NCKIPSD-202ENST00000413374 AAMDCQ9H7C9 122 aa7.2□□□□□ -1.26
NCKIPSD-202ENST00000413374 P0DMU3 169 aa7.19□□□□□ -1.26
NCKIPSD-202ENST00000413374 FAM231AP0DMU4 169 aa7.19□□□□□ -1.26
NCKIPSD-202ENST00000413374 FAM231CP0DMU5 169 aa7.19□□□□□ -1.26
NCKIPSD-202ENST00000413374 CD300CQ08708 224 aa7.19□□□□□ -1.26
NCKIPSD-202ENST00000413374 BTN1A1Q13410 526 aa7.19□□□□□ -1.26
NCKIPSD-202ENST00000413374 Q5BKY6 102 aa7.19□□□□□ -1.26
NCKIPSD-202ENST00000413374 UBE2DNLQ8IWF7 75 aa7.19□□□□□ -1.26
NCKIPSD-202ENST00000413374 POM121L12Q8N7R1 296 aa7.19□□□□□ -1.26
NCKIPSD-202ENST00000413374 FXYD5Q96DB9 178 aa7.19□□□□□ -1.26
NCKIPSD-202ENST00000413374 MRPL53Q96EL3 112 aaKnown RBP7.19□□□□□ -1.26
NCKIPSD-202ENST00000413374 ZNF503Q96F45 646 aa7.19□□□□□ -1.26
NCKIPSD-202ENST00000413374 PHYHIPLQ96FC7 376 aa7.19□□□□□ -1.26
NCKIPSD-202ENST00000413374 MRPL32Q9BYC8 188 aaKnown RBP7.19□□□□□ -1.26
NCKIPSD-202ENST00000413374 KCNIP2Q9NS61 270 aa7.19□□□□□ -1.26
NCKIPSD-202ENST00000413374 PRELID1Q9Y255 219 aa7.19□□□□□ -1.26
NCKIPSD-202ENST00000413374 TIMM8BQ9Y5J9 83 aaPredicted RBP7.19□□□□□ -1.26
NCKIPSD-202ENST00000413374 DNAH6Q9C0G6 4158 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms