RNA–Protein interactions for RNA: ENST00000412568.6

PTPRF-204, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 5

Gene PTPRF, Length 4,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-204ENST00000412568 OR11H12B2RN74 326 aa8.93□□□□□ -0.98
PTPRF-204ENST00000412568 TCRAP04437 139 aa8.93□□□□□ -0.98
PTPRF-204ENST00000412568 ACTL10Q5JWF8 245 aa8.93□□□□□ -0.98
PTPRF-204ENST00000412568 OR11H1Q8NG94 326 aa8.93□□□□□ -0.98
PTPRF-204ENST00000412568 OR11H2Q8NH07 326 aa8.93□□□□□ -0.98
PTPRF-204ENST00000412568 DDB2Q92466 427 aa8.93□□□□□ -0.98
PTPRF-204ENST00000412568 COL6A3P12111 3177 aa8.93□□□□□ -0.98
PTPRF-204ENST00000412568 IGHV4-61A0A0C4DH41 118 aa8.93□□□□□ -0.98
PTPRF-204ENST00000412568 CDPF1Q6NVV7 123 aa8.93□□□□□ -0.98
PTPRF-204ENST00000412568 RNF5Q99942 180 aa8.93□□□□□ -0.98
PTPRF-204ENST00000412568 E7EUB6 86 aa8.93□□□□□ -0.98
PTPRF-204ENST00000412568 ZNF688P0C7X2 276 aa8.93□□□□□ -0.98
PTPRF-204ENST00000412568 C3orf79P0CE67 100 aa8.93□□□□□ -0.98
PTPRF-204ENST00000412568 SPEGQ15772 3267 aa8.93□□□□□ -0.98
PTPRF-204ENST00000412568 OOSP1A8MZH6 123 aa8.92□□□□□ -0.98
PTPRF-204ENST00000412568 TTC9CQ8N5M4 171 aa8.92□□□□□ -0.98
PTPRF-204ENST00000412568 OR4X2Q8NGF9 303 aa8.92□□□□□ -0.98
PTPRF-204ENST00000412568 TSKUQ8WUA8 353 aa8.92□□□□□ -0.98
PTPRF-204ENST00000412568 GGTLC3B5MD39 225 aa8.92□□□□□ -0.98
PTPRF-204ENST00000412568 FNDC10F2Z333 226 aa8.92□□□□□ -0.98
PTPRF-204ENST00000412568 OVOL3O00110 214 aa8.92□□□□□ -0.98
PTPRF-204ENST00000412568 LINC00614P0C842 121 aa8.92□□□□□ -0.98
PTPRF-204ENST00000412568 FLNBO75369 2602 aaKnown RBP8.91□□□□□ -0.98
PTPRF-204ENST00000412568 A0A1B0GV72 72 aa8.91□□□□□ -0.98
PTPRF-204ENST00000412568 MPV17L2Q567V2 206 aa8.91□□□□□ -0.98
PTPRF-204ENST00000412568 LINC00311Q8N616 119 aa8.91□□□□□ -0.98
PTPRF-204ENST00000412568 FER1L6-AS1Q8NA97 138 aa8.91□□□□□ -0.98
PTPRF-204ENST00000412568 OR2K2Q8NGT1 345 aa8.91□□□□□ -0.98
PTPRF-204ENST00000412568 ZNF418Q8TF45 676 aaPredicted RBP8.91□□□□□ -0.98
PTPRF-204ENST00000412568 C11orf1Q9H5F2 150 aa8.91□□□□□ -0.98
PTPRF-204ENST00000412568 FOXC2Q99958 501 aa8.91□□□□□ -0.98
PTPRF-204ENST00000412568 MCRIP2Q9BUT9 160 aaKnown RBP8.91□□□□□ -0.98
PTPRF-204ENST00000412568 NHP2Q9NX24 153 aaKnown RBP8.91□□□□□ -0.98
PTPRF-204ENST00000412568 IGHV1-69DA0A0B4J2H0 117 aa8.91□□□□□ -0.98
PTPRF-204ENST00000412568 FABP5P3A8MUU1 101 aa8.91□□□□□ -0.98
PTPRF-204ENST00000412568 IGHV1-69P01742 117 aa8.91□□□□□ -0.98
PTPRF-204ENST00000412568 DMRTC2Q8IXT2 367 aaPredicted RBP8.91□□□□□ -0.98
PTPRF-204ENST00000412568 RNF182Q8N6D2 247 aa8.91□□□□□ -0.98
PTPRF-204ENST00000412568 POLR3KQ9Y2Y1 108 aaPredicted RBP8.91□□□□□ -0.98
PTPRF-204ENST00000412568 IGHV4-30-2A0A087WSY4 118 aa8.91□□□□□ -0.98
PTPRF-204ENST00000412568 PF4P02776 101 aa8.91□□□□□ -0.98
PTPRF-204ENST00000412568 RPS20P60866 119 aaKnown RBP8.91□□□□□ -0.98
PTPRF-204ENST00000412568 Q96MF0 132 aa8.91□□□□□ -0.98
PTPRF-204ENST00000412568 C19orf84I3L1E1 186 aa8.9□□□□□ -0.98
PTPRF-204ENST00000412568 APOMO95445 188 aa8.9□□□□□ -0.98
PTPRF-204ENST00000412568 NPSP0C0P6 89 aa8.9□□□□□ -0.98
PTPRF-204ENST00000412568 ZNF56Q15929 161 aa8.9□□□□□ -0.98
PTPRF-204ENST00000412568 PSMG4Q5JS54 123 aa8.9□□□□□ -0.98
PTPRF-204ENST00000412568 ODF3L1Q8IXM7 274 aa8.9□□□□□ -0.98
PTPRF-204ENST00000412568 ZNF256Q9Y2P7 627 aaPredicted RBP8.9□□□□□ -0.98
PTPRF-204ENST00000412568 DOPEY1Q5JWR5 2465 aa8.9□□□□□ -0.98
PTPRF-204ENST00000412568 hDV102S1A0JD36 115 aa8.9□□□□□ -0.98
PTPRF-204ENST00000412568 CRXO43186 299 aaPredicted RBP8.9□□□□□ -0.98
PTPRF-204ENST00000412568 IGHV4-39P01824 125 aa8.9□□□□□ -0.98
PTPRF-204ENST00000412568 ZFP36P26651 326 aaKnown RBP8.9□□□□□ -0.98
PTPRF-204ENST00000412568 BRWD1-AS2P59051 145 aa8.9□□□□□ -0.98
PTPRF-204ENST00000412568 CDSNQ15517 529 aa8.9□□□□□ -0.98
PTPRF-204ENST00000412568 C1orf229Q6ZS94 237 aaPredicted RBP8.9□□□□□ -0.98
PTPRF-204ENST00000412568 NUP35Q8NFH5 326 aa8.9□□□□□ -0.98
PTPRF-204ENST00000412568 NCKAP5O14513 1909 aa8.9□□□□□ -0.99
PTPRF-204ENST00000412568 FXYD7P58549 80 aa8.9□□□□□ -0.99
PTPRF-204ENST00000412568 CACNG7P62955 275 aa8.9□□□□□ -0.99
PTPRF-204ENST00000412568 ERCC8Q13216 396 aa8.9□□□□□ -0.99
PTPRF-204ENST00000412568 POU2AF1Q16633 256 aa8.9□□□□□ -0.99
PTPRF-204ENST00000412568 SIGLEC15Q6ZMC9 328 aa8.9□□□□□ -0.99
PTPRF-204ENST00000412568 JKAMPQ9P055 326 aa8.9□□□□□ -0.99
PTPRF-204ENST00000412568 IGLC7A0M8Q6 106 aa8.89□□□□□ -0.99
PTPRF-204ENST00000412568 PSMB11A5LHX3 300 aa8.89□□□□□ -0.99
PTPRF-204ENST00000412568 PRR20EP86478 221 aa8.89□□□□□ -0.99
PTPRF-204ENST00000412568 PRR20CP86479 221 aa8.89□□□□□ -0.99
PTPRF-204ENST00000412568 PRR20DP86480 221 aa8.89□□□□□ -0.99
PTPRF-204ENST00000412568 PRR20BP86481 221 aa8.89□□□□□ -0.99
PTPRF-204ENST00000412568 PRR20AP86496 221 aa8.89□□□□□ -0.99
PTPRF-204ENST00000412568 SAMD13Q5VXD3 122 aa8.89□□□□□ -0.99
PTPRF-204ENST00000412568 MRPL16Q9NX20 251 aaKnown RBP8.89□□□□□ -0.99
PTPRF-204ENST00000412568 LY96Q9Y6Y9 160 aa8.89□□□□□ -0.99
PTPRF-204ENST00000412568 SMAGPQ0VAQ4 97 aa8.89□□□□□ -0.99
PTPRF-204ENST00000412568 OR10J3Q5JRS4 329 aa8.89□□□□□ -0.99
PTPRF-204ENST00000412568 ORMDL3Q8N138 153 aa8.89□□□□□ -0.99
PTPRF-204ENST00000412568 EVI2AP22794 236 aa8.89□□□□□ -0.99
PTPRF-204ENST00000412568 ZNF138P52744 262 aa8.89□□□□□ -0.99
PTPRF-204ENST00000412568 EMP1P54849 157 aa8.89□□□□□ -0.99
PTPRF-204ENST00000412568 MORN5Q5VZ52 161 aa8.89□□□□□ -0.99
PTPRF-204ENST00000412568 LINC01356Q8N9X3 169 aa8.89□□□□□ -0.99
PTPRF-204ENST00000412568 C17orf77Q96MU5 243 aa8.89□□□□□ -0.99
PTPRF-204ENST00000412568 A0A087X0K7 114 aa8.88□□□□□ -0.99
PTPRF-204ENST00000412568 NCR2O95944 276 aa8.88□□□□□ -0.99
PTPRF-204ENST00000412568 CD7P09564 240 aa8.88□□□□□ -0.99
PTPRF-204ENST00000412568 TMEM95Q3KNT9 176 aa8.88□□□□□ -0.99
PTPRF-204ENST00000412568 TTC32Q5I0X7 151 aa8.88□□□□□ -0.99
PTPRF-204ENST00000412568 PIP4P2Q8N4L2 257 aa8.88□□□□□ -0.99
PTPRF-204ENST00000412568 TMEM8BA6NDV4 472 aa8.88□□□□□ -0.99
PTPRF-204ENST00000412568 FCN3O75636 299 aa8.88□□□□□ -0.99
PTPRF-204ENST00000412568 TSPOP30536 169 aa8.88□□□□□ -0.99
PTPRF-204ENST00000412568 SYNJ2BPP57105 145 aa8.88□□□□□ -0.99
PTPRF-204ENST00000412568 VWC2Q2TAL6 325 aa8.88□□□□□ -0.99
PTPRF-204ENST00000412568 NSUN5P1Q3KNT7 163 aa8.88□□□□□ -0.99
PTPRF-204ENST00000412568 ZNF295-AS1Q8N0V1 137 aa8.88□□□□□ -0.99
PTPRF-204ENST00000412568 LSM4Q9Y4Z0 139 aaKnown RBP8.88□□□□□ -0.99
PTPRF-204ENST00000412568 COX6CP09669 75 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 109.4 ms