RNA–Protein interactions for RNA: ENST00000412342.5

HDAC8-210, Transcript of histone deacetylase 8, humanhuman

TSL 1 (best)

Gene HDAC8, Length 679 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-210ENST00000412342 C11orf68Q9H3H3 251 aaKnown RBP9.54□□□□□ -0.88
HDAC8-210ENST00000412342 SACSQ9NZJ4 4579 aa9.54□□□□□ -0.88
HDAC8-210ENST00000412342 C3orf84H3BNL1 204 aa9.53□□□□□ -0.88
HDAC8-210ENST00000412342 TAAR5O14804 337 aa9.53□□□□□ -0.88
HDAC8-210ENST00000412342 SERF2P84101 59 aa9.53□□□□□ -0.88
HDAC8-210ENST00000412342 HIST1H1AQ02539 215 aaPredicted RBP9.53□□□□□ -0.88
HDAC8-210ENST00000412342 KHDC3LQ587J8 217 aa9.53□□□□□ -0.88
HDAC8-210ENST00000412342 FAM122CQ6P4D5 195 aa9.53□□□□□ -0.88
HDAC8-210ENST00000412342 EXOC3-AS1Q8N2X6 119 aa9.53□□□□□ -0.88
HDAC8-210ENST00000412342 OR10G4Q8NGN3 311 aa9.53□□□□□ -0.88
HDAC8-210ENST00000412342 OR10G9Q8NGN4 311 aa9.53□□□□□ -0.88
HDAC8-210ENST00000412342 OR10G7Q8NGN6 311 aa9.53□□□□□ -0.88
HDAC8-210ENST00000412342 BLNKQ8WV28 456 aa9.53□□□□□ -0.88
HDAC8-210ENST00000412342 BORCS7-ASMTA0A0B4J1R7 106 aa9.52□□□□□ -0.89
HDAC8-210ENST00000412342 OR7C2O60412 319 aa9.52□□□□□ -0.89
HDAC8-210ENST00000412342 JTBO76095 146 aa9.52□□□□□ -0.89
HDAC8-210ENST00000412342 TAS2R45P59539 299 aa9.52□□□□□ -0.89
HDAC8-210ENST00000412342 UBE2L3P68036 154 aaKnown RBP9.52□□□□□ -0.89
HDAC8-210ENST00000412342 SPINK13Q1W4C9 94 aa9.52□□□□□ -0.89
HDAC8-210ENST00000412342 TCTE3Q8IZS6 198 aa9.52□□□□□ -0.89
HDAC8-210ENST00000412342 C1orf158Q8N1D5 194 aa9.52□□□□□ -0.89
HDAC8-210ENST00000412342 GNPNAT1Q96EK6 184 aaPredicted RBP9.52□□□□□ -0.89
HDAC8-210ENST00000412342 IGHV4-28A0A0C4DH34 117 aa9.51□□□□□ -0.89
HDAC8-210ENST00000412342 NPIPB6E9PJ23 425 aa9.51□□□□□ -0.89
HDAC8-210ENST00000412342 BOLA2-SMG1P6H3BVE0 249 aa9.51□□□□□ -0.89
HDAC8-210ENST00000412342 M0R2Z0 102 aa9.51□□□□□ -0.89
HDAC8-210ENST00000412342 STAG3L2P0CL84 134 aa9.51□□□□□ -0.89
HDAC8-210ENST00000412342 STAG3L3P0CL85 134 aa9.51□□□□□ -0.89
HDAC8-210ENST00000412342 RBMY1A1P0DJD3 496 aaKnown RBP9.51□□□□□ -0.89
HDAC8-210ENST00000412342 RBMY1CP0DJD4 496 aa9.51□□□□□ -0.89
HDAC8-210ENST00000412342 MIFP14174 115 aa9.51□□□□□ -0.89
HDAC8-210ENST00000412342 CDC34P49427 236 aaPredicted RBP9.51□□□□□ -0.89
HDAC8-210ENST00000412342 RBMY1FQ15415 496 aaKnown RBP9.51□□□□□ -0.89
HDAC8-210ENST00000412342 CASC10Q5T4H9 136 aa9.51□□□□□ -0.89
HDAC8-210ENST00000412342 PQLC2Q6ZP29 291 aa9.51□□□□□ -0.89
HDAC8-210ENST00000412342 SSX7Q7RTT5 188 aa9.51□□□□□ -0.89
HDAC8-210ENST00000412342 IL17DQ8TAD2 202 aa9.51□□□□□ -0.89
HDAC8-210ENST00000412342 IGF2BP2-AS1Q96M15 143 aa9.51□□□□□ -0.89
HDAC8-210ENST00000412342 NEU1Q99519 415 aa9.51□□□□□ -0.89
HDAC8-210ENST00000412342 ARPC5LQ9BPX5 153 aa9.51□□□□□ -0.89
HDAC8-210ENST00000412342 PRELID1Q9Y255 219 aa9.51□□□□□ -0.89
HDAC8-210ENST00000412342 A0A1W2PPV4 95 aa9.5□□□□□ -0.89
HDAC8-210ENST00000412342 DEFB4AO15263 64 aa9.5□□□□□ -0.89
HDAC8-210ENST00000412342 HMGB3O15347 200 aaKnown RBP9.5□□□□□ -0.89
HDAC8-210ENST00000412342 MBP02144 154 aa9.5□□□□□ -0.89
HDAC8-210ENST00000412342 AMBPP02760 352 aa9.5□□□□□ -0.89
HDAC8-210ENST00000412342 ICAM4Q14773 271 aa9.5□□□□□ -0.89
HDAC8-210ENST00000412342 ZNF726P1Q15940 193 aa9.5□□□□□ -0.89
HDAC8-210ENST00000412342 SUN5Q8TC36 379 aa9.5□□□□□ -0.89
HDAC8-210ENST00000412342 RAB24Q969Q5 203 aa9.5□□□□□ -0.89
HDAC8-210ENST00000412342 A0A0D9SG52 128 aa9.49□□□□□ -0.89
HDAC8-210ENST00000412342 BCL2L11O43521 198 aa9.49□□□□□ -0.89
HDAC8-210ENST00000412342 ARL14EPLP0DKL9 152 aa9.49□□□□□ -0.89
HDAC8-210ENST00000412342 CT45A10P0DMU9 189 aa9.49□□□□□ -0.89
HDAC8-210ENST00000412342 KIR3DS1Q14943 382 aa9.49□□□□□ -0.89
HDAC8-210ENST00000412342 ZFAND6Q6FIF0 208 aa9.49□□□□□ -0.89
HDAC8-210ENST00000412342 BAP18Q8IXM2 172 aa9.49□□□□□ -0.89
HDAC8-210ENST00000412342 LYPD1Q8N2G4 141 aa9.49□□□□□ -0.89
HDAC8-210ENST00000412342 ODF3Q96PU9 254 aa9.49□□□□□ -0.89
HDAC8-210ENST00000412342 Q9H3A6 140 aa9.49□□□□□ -0.89
HDAC8-210ENST00000412342 AAMDCQ9H7C9 122 aa9.49□□□□□ -0.89
HDAC8-210ENST00000412342 PLA2G2EQ9NZK7 142 aa9.49□□□□□ -0.89
HDAC8-210ENST00000412342 hCG_2014768A0A024R1R8 64 aa9.48□□□□□ -0.89
HDAC8-210ENST00000412342 TRAV12-2A0A075B6T6 113 aa9.48□□□□□ -0.89
HDAC8-210ENST00000412342 RANP62826 216 aaKnown RBP9.48□□□□□ -0.89
HDAC8-210ENST00000412342 OR10J6PQ8NGY7 276 aa9.48□□□□□ -0.89
HDAC8-210ENST00000412342 FAM19A4Q96LR4 140 aa9.48□□□□□ -0.89
HDAC8-210ENST00000412342 RYR3Q15413 4870 aa9.48□□□□□ -0.89
HDAC8-210ENST00000412342 DNAH1Q9P2D7 4330 aa9.48□□□□□ -0.89
HDAC8-210ENST00000412342 IGKV2-40A0A087WW87 121 aaPredicted RBP9.47□□□□□ -0.89
HDAC8-210ENST00000412342 A0A1B0GVG6 124 aa9.47□□□□□ -0.89
HDAC8-210ENST00000412342 INSP01308 110 aa9.47□□□□□ -0.89
HDAC8-210ENST00000412342 IGKV2D-40P01614 121 aaPredicted RBP9.47□□□□□ -0.89
HDAC8-210ENST00000412342 C1QBP02746 253 aa9.47□□□□□ -0.89
HDAC8-210ENST00000412342 CDKN1BP46527 198 aa9.47□□□□□ -0.89
HDAC8-210ENST00000412342 CD300CQ08708 224 aa9.47□□□□□ -0.89
HDAC8-210ENST00000412342 ERCC8Q13216 396 aa9.47□□□□□ -0.89
HDAC8-210ENST00000412342 LGALSLQ3ZCW2 172 aaPredicted RBP9.47□□□□□ -0.89
HDAC8-210ENST00000412342 C9orf47Q6ZRZ4 202 aa9.47□□□□□ -0.89
HDAC8-210ENST00000412342 TMUB2Q71RG4 321 aa9.47□□□□□ -0.89
HDAC8-210ENST00000412342 ACTR3CQ9C0K3 210 aaPredicted RBP9.47□□□□□ -0.89
HDAC8-210ENST00000412342 AGPAT4-IT1Q9H0P7 198 aa9.47□□□□□ -0.89
HDAC8-210ENST00000412342 GOLT1BQ9Y3E0 138 aa9.47□□□□□ -0.89
HDAC8-210ENST00000412342 IGHV3OR16-12A0A075B7B8 117 aa9.46□□□□□ -0.9
HDAC8-210ENST00000412342 CTXND1A0A1B0GTU2 59 aa9.46□□□□□ -0.9
HDAC8-210ENST00000412342 KANTRA0A1W2PQU2 76 aa9.46□□□□□ -0.9
HDAC8-210ENST00000412342 SMIM9A6NGZ8 99 aa9.46□□□□□ -0.9
HDAC8-210ENST00000412342 GCHFRP30047 84 aa9.46□□□□□ -0.9
HDAC8-210ENST00000412342 GFI1BQ5VTD9 330 aa9.46□□□□□ -0.9
HDAC8-210ENST00000412342 LYSTQ99698 3801 aa9.46□□□□□ -0.9
HDAC8-210ENST00000412342 VGLL1Q99990 258 aa9.46□□□□□ -0.9
HDAC8-210ENST00000412342 OTORQ9NRC9 128 aa9.46□□□□□ -0.9
HDAC8-210ENST00000412342 TENM2Q9NT68 2774 aa9.46□□□□□ -0.9
HDAC8-210ENST00000412342 ALMS1Q8TCU4 4167 aa9.45□□□□□ -0.9
HDAC8-210ENST00000412342 RYR2Q92736 4967 aa9.45□□□□□ -0.9
HDAC8-210ENST00000412342 SEC11BP0C7V7 166 aa9.45□□□□□ -0.9
HDAC8-210ENST00000412342 NANOS2P60321 138 aaKnown RBP9.45□□□□□ -0.9
HDAC8-210ENST00000412342 AKAP14Q86UN6 197 aa9.45□□□□□ -0.9
HDAC8-210ENST00000412342 LINC00477Q96M19 166 aa9.45□□□□□ -0.9
HDAC8-210ENST00000412342 ZNF471Q9BX82 626 aaPredicted RBP9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms