RNA–Protein interactions for RNA: ENST00000412272.6

HERC4-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-205ENST00000412272 ZNF442Q9H7R0 627 aa4.09□□□□□ -1.75
HERC4-205ENST00000412272 RNF7Q9UBF6 113 aa4.09□□□□□ -1.75
HERC4-205ENST00000412272 Q9UF83 564 aa4.09□□□□□ -1.75
HERC4-205ENST00000412272 LRP4O75096 1905 aa4.09□□□□□ -1.75
HERC4-205ENST00000412272 LOC107984156A0A0G2JMH3 177 aa4.09□□□□□ -1.75
HERC4-205ENST00000412272 UBE2D1P51668 147 aa4.09□□□□□ -1.75
HERC4-205ENST00000412272 PIGYQ3MUY2 71 aa4.09□□□□□ -1.75
HERC4-205ENST00000412272 OXLD1Q5BKU9 147 aa4.09□□□□□ -1.75
HERC4-205ENST00000412272 FAM90A1Q86YD7 464 aa4.09□□□□□ -1.75
HERC4-205ENST00000412272 ARL17AQ8IVW1 177 aa4.09□□□□□ -1.75
HERC4-205ENST00000412272 MAPKAPK5-AS1Q8N8E1 139 aa4.09□□□□□ -1.75
HERC4-205ENST00000412272 OR8A1Q8NGG7 326 aa4.09□□□□□ -1.75
HERC4-205ENST00000412272 NXT2Q9NPJ8 142 aaKnown RBP4.09□□□□□ -1.75
HERC4-205ENST00000412272 FREM3P0C091 2139 aa4.09□□□□□ -1.76
HERC4-205ENST00000412272 WI2-2373I1.2A0A1W2PRP0 233 aa4.09□□□□□ -1.76
HERC4-205ENST00000412272 LINC01549A6NIU2 74 aa4.09□□□□□ -1.76
HERC4-205ENST00000412272 SRRM4A7MD48 611 aaKnown RBP4.09□□□□□ -1.76
HERC4-205ENST00000412272 OVOL3O00110 214 aa4.09□□□□□ -1.76
HERC4-205ENST00000412272 NDUFC2O95298 119 aa4.09□□□□□ -1.76
HERC4-205ENST00000412272 PRR20EP86478 221 aa4.09□□□□□ -1.76
HERC4-205ENST00000412272 PRR20CP86479 221 aa4.09□□□□□ -1.76
HERC4-205ENST00000412272 PRR20DP86480 221 aa4.09□□□□□ -1.76
HERC4-205ENST00000412272 PRR20BP86481 221 aa4.09□□□□□ -1.76
HERC4-205ENST00000412272 PRR20AP86496 221 aa4.09□□□□□ -1.76
HERC4-205ENST00000412272 ASPHD1Q5U4P2 390 aa4.09□□□□□ -1.76
HERC4-205ENST00000412272 HIST2H2BCQ6DN03 193 aa4.09□□□□□ -1.76
HERC4-205ENST00000412272 HIST2H2BDQ6DRA6 164 aa4.09□□□□□ -1.76
HERC4-205ENST00000412272 RPRMLQ8N4K4 120 aa4.09□□□□□ -1.76
HERC4-205ENST00000412272 MGST2Q99735 147 aa4.09□□□□□ -1.76
HERC4-205ENST00000412272 MRPL20Q9BYC9 149 aaKnown RBP4.09□□□□□ -1.76
HERC4-205ENST00000412272 PROK2Q9HC23 129 aa4.09□□□□□ -1.76
HERC4-205ENST00000412272 DKK2Q9UBU2 259 aa4.09□□□□□ -1.76
HERC4-205ENST00000412272 MYO7AQ13402 2215 aa4.08□□□□□ -1.76
HERC4-205ENST00000412272 TRAV12-2A0A075B6T6 113 aa4.08□□□□□ -1.76
HERC4-205ENST00000412272 TRAV26-2A0A0B4J265 109 aa4.08□□□□□ -1.76
HERC4-205ENST00000412272 TRAV41A0A0B4J266 112 aa4.08□□□□□ -1.76
HERC4-205ENST00000412272 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.08□□□□□ -1.76
HERC4-205ENST00000412272 H0YGG7 62 aa4.08□□□□□ -1.76
HERC4-205ENST00000412272 PYYP10082 97 aa4.08□□□□□ -1.76
HERC4-205ENST00000412272 CA6P23280 308 aa4.08□□□□□ -1.76
HERC4-205ENST00000412272 FGF12P61328 243 aa4.08□□□□□ -1.76
HERC4-205ENST00000412272 LOXL1Q08397 574 aaPredicted RBP4.08□□□□□ -1.76
HERC4-205ENST00000412272 SFTA2Q6UW10 78 aa4.08□□□□□ -1.76
HERC4-205ENST00000412272 C5orf38Q86SI9 138 aa4.08□□□□□ -1.76
HERC4-205ENST00000412272 PDPNQ86YL7 162 aa4.08□□□□□ -1.76
HERC4-205ENST00000412272 C1orf159Q96HA4 380 aa4.08□□□□□ -1.76
HERC4-205ENST00000412272 KLF13Q9Y2Y9 288 aaPredicted RBP4.08□□□□□ -1.76
HERC4-205ENST00000412272 CACNA1CQ13936 2221 aa4.08□□□□□ -1.76
HERC4-205ENST00000412272 IGKV3-11P04433 115 aa4.08□□□□□ -1.76
HERC4-205ENST00000412272 MAGEA5P43359 124 aa4.08□□□□□ -1.76
HERC4-205ENST00000412272 ZNF799Q96GE5 643 aa4.08□□□□□ -1.76
HERC4-205ENST00000412272 TIMM8BQ9Y5J9 83 aaPredicted RBP4.08□□□□□ -1.76
HERC4-205ENST00000412272 U3KQK5 164 aa4.08□□□□□ -1.76
HERC4-205ENST00000412272 SHANK1Q9Y566 2161 aa4.08□□□□□ -1.76
HERC4-205ENST00000412272 H3BS24 57 aa4.08□□□□□ -1.76
HERC4-205ENST00000412272 SCRG1O75711 98 aa4.08□□□□□ -1.76
HERC4-205ENST00000412272 Q71RC1 249 aaPredicted RBP4.08□□□□□ -1.76
HERC4-205ENST00000412272 ZNF414Q96IQ9 312 aa4.08□□□□□ -1.76
HERC4-205ENST00000412272 ZNF256Q9Y2P7 627 aaPredicted RBP4.08□□□□□ -1.76
HERC4-205ENST00000412272 TRGV8A0A0C4DH27 118 aa4.07□□□□□ -1.76
HERC4-205ENST00000412272 NCBP2LA6PVI3 153 aaKnown RBP4.07□□□□□ -1.76
HERC4-205ENST00000412272 TCRAP04437 139 aa4.07□□□□□ -1.76
HERC4-205ENST00000412272 NSUN5P1Q3KNT7 163 aa4.07□□□□□ -1.76
HERC4-205ENST00000412272 DEFB121Q5J5C9 76 aa4.07□□□□□ -1.76
HERC4-205ENST00000412272 Q6ZRU5 148 aa4.07□□□□□ -1.76
HERC4-205ENST00000412272 TDHQ8IZJ6 230 aa4.07□□□□□ -1.76
HERC4-205ENST00000412272 HIST1H4GQ99525 98 aa4.07□□□□□ -1.76
HERC4-205ENST00000412272 ZFHX4Q86UP3 3567 aa4.07□□□□□ -1.76
HERC4-205ENST00000412272 IGLV3-32A0A0A0MS00 114 aa4.07□□□□□ -1.76
HERC4-205ENST00000412272 HIGD1CA8MV81 97 aa4.07□□□□□ -1.76
HERC4-205ENST00000412272 HSPB6O14558 160 aa4.07□□□□□ -1.76
HERC4-205ENST00000412272 WISP1O95388 367 aa4.07□□□□□ -1.76
HERC4-205ENST00000412272 P01737 135 aa4.07□□□□□ -1.76
HERC4-205ENST00000412272 LOXP28300 417 aaPredicted RBP4.07□□□□□ -1.76
HERC4-205ENST00000412272 DUTP33316 252 aaKnown RBP4.07□□□□□ -1.76
HERC4-205ENST00000412272 KHDC1LQ5JSQ8 128 aa4.07□□□□□ -1.76
HERC4-205ENST00000412272 SRSF12Q8WXF0 261 aaKnown RBP4.07□□□□□ -1.76
HERC4-205ENST00000412272 DEFB118Q96PH6 123 aa4.07□□□□□ -1.76
HERC4-205ENST00000412272 H3BT86 120 aa4.07□□□□□ -1.76
HERC4-205ENST00000412272 ZNF22P17026 224 aaPredicted RBP4.07□□□□□ -1.76
HERC4-205ENST00000412272 CD177Q8N6Q3 437 aa4.07□□□□□ -1.76
HERC4-205ENST00000412272 SLC25A2Q9BXI2 301 aa4.07□□□□□ -1.76
HERC4-205ENST00000412272 ZNF355PQ9NSJ1 428 aa4.07□□□□□ -1.76
HERC4-205ENST00000412272 EML6Q6ZMW3 1958 aa4.07□□□□□ -1.76
HERC4-205ENST00000412272 TRBV6-1A0A0K0K1D8 114 aa4.06□□□□□ -1.76
HERC4-205ENST00000412272 PGPA6NDG6 321 aa4.06□□□□□ -1.76
HERC4-205ENST00000412272 TNRC18O15417 2968 aaPredicted RBP4.06□□□□□ -1.76
HERC4-205ENST00000412272 LIFP15018 202 aa4.06□□□□□ -1.76
HERC4-205ENST00000412272 HERVK_113P61574 105 aa4.06□□□□□ -1.76
HERC4-205ENST00000412272 PEMTQ9UBM1 199 aa4.06□□□□□ -1.76
HERC4-205ENST00000412272 SERP1Q9Y6X1 66 aa4.06□□□□□ -1.76
HERC4-205ENST00000412272 CENPFP49454 3210 aa4.06□□□□□ -1.76
HERC4-205ENST00000412272 ATOX1O00244 68 aa4.06□□□□□ -1.76
HERC4-205ENST00000412272 UBE2E1P51965 193 aa4.06□□□□□ -1.76
HERC4-205ENST00000412272 FKBP1BP68106 108 aa4.06□□□□□ -1.76
HERC4-205ENST00000412272 SDIM1Q6ZPB5 146 aa4.06□□□□□ -1.76
HERC4-205ENST00000412272 SMCR5Q8TEV8 140 aa4.06□□□□□ -1.76
HERC4-205ENST00000412272 SPTSSAQ969W0 71 aa4.06□□□□□ -1.76
HERC4-205ENST00000412272 TSACCQ96A04 125 aaPredicted RBP4.06□□□□□ -1.76
HERC4-205ENST00000412272 UBE2E2Q96LR5 201 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 238.3 ms