RNA–Protein interactions for RNA: ENST00000411819.1

MSH6-202, Transcript of mutS homolog 6, humanhuman

TSL 4

Gene MSH6, Length 548 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-202ENST00000411819 RAB32Q13637 225 aa15.72■□□□□ 0.11
MSH6-202ENST00000411819 PFDN5Q99471 154 aa15.72■□□□□ 0.11
MSH6-202ENST00000411819 TIMM8BQ9Y5J9 83 aaPredicted RBP15.72■□□□□ 0.11
MSH6-202ENST00000411819 TRAV5A0A0B4J249 113 aa15.71■□□□□ 0.11
MSH6-202ENST00000411819 IGSF23A1L1A6 192 aa15.71■□□□□ 0.11
MSH6-202ENST00000411819 H7BYZ3 331 aa15.71■□□□□ 0.11
MSH6-202ENST00000411819 J3KRW8 73 aa15.71■□□□□ 0.11
MSH6-202ENST00000411819 NUDT3O95989 172 aa15.71■□□□□ 0.11
MSH6-202ENST00000411819 HBG1P69891 147 aa15.71■□□□□ 0.11
MSH6-202ENST00000411819 HBG2P69892 147 aa15.71■□□□□ 0.11
MSH6-202ENST00000411819 KIR3DS1Q14943 382 aa15.71■□□□□ 0.11
MSH6-202ENST00000411819 Q6ZR54 194 aa15.71■□□□□ 0.11
MSH6-202ENST00000411819 TMEM263Q8WUH6 116 aaKnown RBP15.71■□□□□ 0.11
MSH6-202ENST00000411819 NOP10Q9NPE3 64 aaKnown RBP15.71■□□□□ 0.11
MSH6-202ENST00000411819 S100A11P31949 105 aa15.7■□□□□ 0.1
MSH6-202ENST00000411819 VWC2Q2TAL6 325 aa15.7■□□□□ 0.1
MSH6-202ENST00000411819 SOHLH1Q5JUK2 328 aa15.7■□□□□ 0.1
MSH6-202ENST00000411819 GFI1BQ5VTD9 330 aa15.7■□□□□ 0.1
MSH6-202ENST00000411819 MZT2BQ6NZ67 158 aa15.7■□□□□ 0.1
MSH6-202ENST00000411819 ZNF493Q6ZR52 646 aa15.7■□□□□ 0.1
MSH6-202ENST00000411819 TMEM252Q8N6L7 170 aa15.7■□□□□ 0.1
MSH6-202ENST00000411819 RNASE8Q8TDE3 154 aaKnown RBP15.7■□□□□ 0.1
MSH6-202ENST00000411819 SAT2Q96F10 170 aaPredicted RBP15.7■□□□□ 0.1
MSH6-202ENST00000411819 C20orf144Q9BQM9 153 aa15.7■□□□□ 0.1
MSH6-202ENST00000411819 SLC39A9Q9NUM3 307 aa15.7■□□□□ 0.1
MSH6-202ENST00000411819 CBY3A6NI87 242 aa15.69■□□□□ 0.1
MSH6-202ENST00000411819 FGF7P21781 194 aa15.69■□□□□ 0.1
MSH6-202ENST00000411819 RPL29P47914 159 aaKnown RBP15.69■□□□□ 0.1
MSH6-202ENST00000411819 GUK1Q16774 197 aa15.69■□□□□ 0.1
MSH6-202ENST00000411819 GPN1Q9HCN4 374 aaPredicted RBP15.69■□□□□ 0.1
MSH6-202ENST00000411819 CCDC28AQ8IWP9 274 aa15.68■□□□□ 0.1
MSH6-202ENST00000411819 LEPP41159 167 aa15.67■□□□□ 0.1
MSH6-202ENST00000411819 FAM3BP58499 235 aaPredicted RBP15.67■□□□□ 0.1
MSH6-202ENST00000411819 ZNF586Q9NXT0 402 aa15.67■□□□□ 0.1
MSH6-202ENST00000411819 PKHD1P08F94 4074 aa15.67■□□□□ 0.1
MSH6-202ENST00000411819 IL15RAQ13261 267 aa15.66■□□□□ 0.1
MSH6-202ENST00000411819 NPIPB6E9PJ23 425 aa15.65■□□□□ 0.1
MSH6-202ENST00000411819 CT45A10P0DMU9 189 aa15.65■□□□□ 0.1
MSH6-202ENST00000411819 ATP6V1FQ16864 119 aa15.65■□□□□ 0.1
MSH6-202ENST00000411819 C1orf134Q5TEV5 83 aa15.65■□□□□ 0.1
MSH6-202ENST00000411819 ENKURQ8TC29 256 aa15.65■□□□□ 0.1
MSH6-202ENST00000411819 S100ZQ8WXG8 99 aa15.65■□□□□ 0.1
MSH6-202ENST00000411819 KRTAP17-1Q9BYP8 105 aa15.65■□□□□ 0.1
MSH6-202ENST00000411819 TRAV12-3A0A0B4J271 114 aa15.64■□□□□ 0.09
MSH6-202ENST00000411819 SNURFLB1AK76 121 aa15.64■□□□□ 0.09
MSH6-202ENST00000411819 ZNF253O75346 499 aa15.64■□□□□ 0.09
MSH6-202ENST00000411819 ASAH1Q13510 395 aa15.64■□□□□ 0.09
MSH6-202ENST00000411819 RNF141Q8WVD5 230 aa15.64■□□□□ 0.09
MSH6-202ENST00000411819 ODF3Q96PU9 254 aa15.64■□□□□ 0.09
MSH6-202ENST00000411819 DNAH11Q96DT5 4516 aa15.64■□□□□ 0.09
MSH6-202ENST00000411819 TRBV19A0A075B6N1 114 aa15.63■□□□□ 0.09
MSH6-202ENST00000411819 M0R3E3 92 aa15.63■□□□□ 0.09
MSH6-202ENST00000411819 RLN2P04090 185 aa15.63■□□□□ 0.09
MSH6-202ENST00000411819 CCL18P55774 89 aa15.63■□□□□ 0.09
MSH6-202ENST00000411819 OR5I1Q13606 314 aa15.63■□□□□ 0.09
MSH6-202ENST00000411819 CLINT1Q14677 625 aa15.63■□□□□ 0.09
MSH6-202ENST00000411819 NPCDR1Q9BY65 106 aa15.63■□□□□ 0.09
MSH6-202ENST00000411819 TIMM9Q9Y5J7 89 aa15.63■□□□□ 0.09
MSH6-202ENST00000411819 DYNC1H1Q14204 4646 aaKnown RBP15.63■□□□□ 0.09
MSH6-202ENST00000411819 GAGE12BA1L429 117 aa15.62■□□□□ 0.09
MSH6-202ENST00000411819 MPDU1O75352 247 aa15.62■□□□□ 0.09
MSH6-202ENST00000411819 GAGE7O76087 117 aa15.62■□□□□ 0.09
MSH6-202ENST00000411819 SIX6O95475 246 aa15.62■□□□□ 0.09
MSH6-202ENST00000411819 GAGE12FP0CL80 117 aa15.62■□□□□ 0.09
MSH6-202ENST00000411819 GAGE12GP0CL81 117 aa15.62■□□□□ 0.09
MSH6-202ENST00000411819 GAGE12IP0CL82 117 aa15.62■□□□□ 0.09
MSH6-202ENST00000411819 PYYP10082 97 aa15.62■□□□□ 0.09
MSH6-202ENST00000411819 GCSAMLQ5JQS6 135 aa15.62■□□□□ 0.09
MSH6-202ENST00000411819 LINC00299Q6ZSB3 139 aa15.62■□□□□ 0.09
MSH6-202ENST00000411819 THAP6Q8TBB0 222 aa15.62■□□□□ 0.09
MSH6-202ENST00000411819 CHAC2Q8WUX2 184 aa15.62■□□□□ 0.09
MSH6-202ENST00000411819 BLNKQ8WV28 456 aa15.62■□□□□ 0.09
MSH6-202ENST00000411819 MRPL53Q96EL3 112 aaKnown RBP15.62■□□□□ 0.09
MSH6-202ENST00000411819 TMEM14CQ9P0S9 112 aa15.62■□□□□ 0.09
MSH6-202ENST00000411819 HIST1H1EP10412 219 aaKnown RBP15.61■□□□□ 0.09
MSH6-202ENST00000411819 NHLH2Q02577 135 aa15.61■□□□□ 0.09
MSH6-202ENST00000411819 ERCC8Q13216 396 aa15.61■□□□□ 0.09
MSH6-202ENST00000411819 LRRC37A5PQ49AS3 106 aa15.61■□□□□ 0.09
MSH6-202ENST00000411819 OR5C1Q8NGR4 320 aa15.61■□□□□ 0.09
MSH6-202ENST00000411819 ZNRF2Q8NHG8 242 aa15.6■□□□□ 0.09
MSH6-202ENST00000411819 GNPNAT1Q96EK6 184 aaPredicted RBP15.6■□□□□ 0.09
MSH6-202ENST00000411819 PYGO2Q9BRQ0 406 aa15.6■□□□□ 0.09
MSH6-202ENST00000411819 AAMDCQ9H7C9 122 aa15.6■□□□□ 0.09
MSH6-202ENST00000411819 PKD1P98161 4303 aa15.59■□□□□ 0.09
MSH6-202ENST00000411819 TRAV26-1A0A087WT03 109 aa15.59■□□□□ 0.09
MSH6-202ENST00000411819 NBDYA0A0U1RRE5 68 aa15.59■□□□□ 0.09
MSH6-202ENST00000411819 NDUFB4O95168 129 aa15.59■□□□□ 0.09
MSH6-202ENST00000411819 MED14OSP0DP75 135 aa15.59■□□□□ 0.09
MSH6-202ENST00000411819 PDE6HQ13956 83 aa15.59■□□□□ 0.09
MSH6-202ENST00000411819 EXOC3-AS1Q8N2X6 119 aa15.59■□□□□ 0.09
MSH6-202ENST00000411819 LINC00612Q8N6U2 182 aa15.59■□□□□ 0.09
MSH6-202ENST00000411819 SLC25A31Q9H0C2 315 aa15.59■□□□□ 0.09
MSH6-202ENST00000411819 PRELID1Q9Y255 219 aa15.59■□□□□ 0.09
MSH6-202ENST00000411819 LINC00588Q9Y4M8 146 aa15.59■□□□□ 0.09
MSH6-202ENST00000411819 A0A0J9YY99 117 aa15.58■□□□□ 0.08
MSH6-202ENST00000411819 C7orf71A4D174 169 aa15.58■□□□□ 0.08
MSH6-202ENST00000411819 E5RGE8 158 aa15.58■□□□□ 0.08
MSH6-202ENST00000411819 UPK1BO75841 260 aa15.58■□□□□ 0.08
MSH6-202ENST00000411819 SLC25A5P05141 298 aaKnown RBP15.58■□□□□ 0.08
MSH6-202ENST00000411819 M6PRP20645 277 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms