RNA–Protein interactions for RNA: ENST00000411792.1

RFC4-203, Transcript of replication factor C subunit 4, humanhuman

TSL 5

Gene RFC4, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-203ENST00000411792 FXYD6-FXYD2A0A087WZ82 144 aa13.17□□□□□ -0.3
RFC4-203ENST00000411792 PRB4P10163 310 aaPredicted RBP13.17□□□□□ -0.3
RFC4-203ENST00000411792 EMP1P54849 157 aa13.17□□□□□ -0.3
RFC4-203ENST00000411792 RRN3P1Q2M238 152 aa13.17□□□□□ -0.3
RFC4-203ENST00000411792 ACOT6Q3I5F7 207 aaPredicted RBP13.17□□□□□ -0.3
RFC4-203ENST00000411792 BAP18Q8IXM2 172 aa13.17□□□□□ -0.3
RFC4-203ENST00000411792 OR2T35Q8NGX2 323 aa13.17□□□□□ -0.3
RFC4-203ENST00000411792 MRPL53Q96EL3 112 aaKnown RBP13.17□□□□□ -0.3
RFC4-203ENST00000411792 PAXXQ9BUH6 204 aa13.17□□□□□ -0.3
RFC4-203ENST00000411792 WFDC1Q9HC57 220 aa13.17□□□□□ -0.3
RFC4-203ENST00000411792 CSMD3Q7Z407 3707 aa13.16□□□□□ -0.3
RFC4-203ENST00000411792 C11orf94C9JXX5 98 aa13.16□□□□□ -0.3
RFC4-203ENST00000411792 TSPOP30536 169 aa13.16□□□□□ -0.3
RFC4-203ENST00000411792 KHDC3LQ587J8 217 aa13.16□□□□□ -0.3
RFC4-203ENST00000411792 C1orf158Q8N1D5 194 aa13.16□□□□□ -0.3
RFC4-203ENST00000411792 TRAV12-2A0A075B6T6 113 aa13.15□□□□□ -0.3
RFC4-203ENST00000411792 TEX48A0A1B0GUV7 120 aa13.15□□□□□ -0.3
RFC4-203ENST00000411792 LOC102723971A0A1B0GUV8 181 aa13.15□□□□□ -0.3
RFC4-203ENST00000411792 OR10J4P0C629 311 aa13.15□□□□□ -0.3
RFC4-203ENST00000411792 NBEAP1P0C6P0 100 aa13.15□□□□□ -0.3
RFC4-203ENST00000411792 CDKN1BP46527 198 aa13.15□□□□□ -0.3
RFC4-203ENST00000411792 FAM167A-AS1Q96KT0 104 aa13.15□□□□□ -0.3
RFC4-203ENST00000411792 A0A1W2PPV4 95 aa13.14□□□□□ -0.31
RFC4-203ENST00000411792 SPART-AS1P0CW21 52 aa13.14□□□□□ -0.31
RFC4-203ENST00000411792 M6PRP20645 277 aa13.14□□□□□ -0.31
RFC4-203ENST00000411792 UBE2L3P68036 154 aaKnown RBP13.14□□□□□ -0.31
RFC4-203ENST00000411792 TMEM256Q8N2U0 113 aa13.14□□□□□ -0.31
RFC4-203ENST00000411792 C2CD4CQ8TF44 421 aa13.14□□□□□ -0.31
RFC4-203ENST00000411792 RNF141Q8WVD5 230 aa13.14□□□□□ -0.31
RFC4-203ENST00000411792 DYNC2H1Q8NCM8 4307 aaKnown RBP13.13□□□□□ -0.31
RFC4-203ENST00000411792 PRAC2D3DTV9 90 aa13.13□□□□□ -0.31
RFC4-203ENST00000411792 CRXO43186 299 aaPredicted RBP13.13□□□□□ -0.31
RFC4-203ENST00000411792 NDUFB4O95168 129 aa13.13□□□□□ -0.31
RFC4-203ENST00000411792 ICAM4Q14773 271 aa13.13□□□□□ -0.31
RFC4-203ENST00000411792 Q5BKY6 102 aa13.13□□□□□ -0.31
RFC4-203ENST00000411792 EXOC3-AS1Q8N2X6 119 aa13.13□□□□□ -0.31
RFC4-203ENST00000411792 RPP25LQ8N5L8 163 aaKnown RBP13.13□□□□□ -0.31
RFC4-203ENST00000411792 HSD17B11Q8NBQ5 300 aa13.13□□□□□ -0.31
RFC4-203ENST00000411792 LINC01587Q99440 93 aa13.13□□□□□ -0.31
RFC4-203ENST00000411792 CELA1Q9UNI1 258 aa13.13□□□□□ -0.31
RFC4-203ENST00000411792 BORCS7-ASMTA0A0B4J1R7 106 aa13.12□□□□□ -0.31
RFC4-203ENST00000411792 TRAV10A0A0B4J240 114 aa13.12□□□□□ -0.31
RFC4-203ENST00000411792 M0R3E3 92 aa13.12□□□□□ -0.31
RFC4-203ENST00000411792 LEPP41159 167 aa13.12□□□□□ -0.31
RFC4-203ENST00000411792 Q6ZTC4 211 aa13.12□□□□□ -0.31
RFC4-203ENST00000411792 FXYD5Q96DB9 178 aa13.12□□□□□ -0.31
RFC4-203ENST00000411792 ODF3Q96PU9 254 aa13.12□□□□□ -0.31
RFC4-203ENST00000411792 NPIPB6E9PJ23 425 aa13.11□□□□□ -0.31
RFC4-203ENST00000411792 CSN1S1P47710 185 aa13.11□□□□□ -0.31
RFC4-203ENST00000411792 FAM122CQ6P4D5 195 aa13.11□□□□□ -0.31
RFC4-203ENST00000411792 ZNF767PQ75MW2 155 aa13.11□□□□□ -0.31
RFC4-203ENST00000411792 OR10G4Q8NGN3 311 aa13.11□□□□□ -0.31
RFC4-203ENST00000411792 OR10G9Q8NGN4 311 aa13.11□□□□□ -0.31
RFC4-203ENST00000411792 OR10G7Q8NGN6 311 aa13.11□□□□□ -0.31
RFC4-203ENST00000411792 TNFSF18Q9UNG2 199 aa13.11□□□□□ -0.31
RFC4-203ENST00000411792 YTHDF2Q9Y5A9 579 aaKnown RBP13.11□□□□□ -0.31
RFC4-203ENST00000411792 RYR2Q92736 4967 aa13.1□□□□□ -0.31
RFC4-203ENST00000411792 ZNF705GA8MUZ8 300 aaPredicted RBP13.1□□□□□ -0.31
RFC4-203ENST00000411792 TAS2R60P59551 318 aa13.1□□□□□ -0.31
RFC4-203ENST00000411792 RAB2AP61019 212 aa13.1□□□□□ -0.31
RFC4-203ENST00000411792 C12orf74Q32Q52 190 aa13.1□□□□□ -0.31
RFC4-203ENST00000411792 C20orf144Q9BQM9 153 aa13.1□□□□□ -0.31
RFC4-203ENST00000411792 PSMG3Q9BT73 122 aaPredicted RBP13.1□□□□□ -0.31
RFC4-203ENST00000411792 RNF222A6NCQ9 220 aa13.09□□□□□ -0.31
RFC4-203ENST00000411792 J3KRW8 73 aa13.09□□□□□ -0.31
RFC4-203ENST00000411792 LY6G6CO95867 125 aa13.09□□□□□ -0.31
RFC4-203ENST00000411792 MBP02144 154 aa13.09□□□□□ -0.31
RFC4-203ENST00000411792 CT45A10P0DMU9 189 aa13.09□□□□□ -0.31
RFC4-203ENST00000411792 HTN1P15515 57 aa13.09□□□□□ -0.31
RFC4-203ENST00000411792 ATP6V0CP27449 155 aa13.09□□□□□ -0.31
RFC4-203ENST00000411792 TCTAP57738 103 aa13.09□□□□□ -0.31
RFC4-203ENST00000411792 RANP62826 216 aaKnown RBP13.09□□□□□ -0.31
RFC4-203ENST00000411792 FAM222AQ5U5X8 452 aa13.09□□□□□ -0.31
RFC4-203ENST00000411792 PQLC2Q6ZP29 291 aa13.09□□□□□ -0.31
RFC4-203ENST00000411792 LYPD1Q8N2G4 141 aa13.09□□□□□ -0.31
RFC4-203ENST00000411792 OR2G3Q8NGZ4 309 aa13.09□□□□□ -0.31
RFC4-203ENST00000411792 GNPNAT1Q96EK6 184 aaPredicted RBP13.09□□□□□ -0.31
RFC4-203ENST00000411792 PHYHIPLQ96FC7 376 aa13.09□□□□□ -0.31
RFC4-203ENST00000411792 LINC00477Q96M19 166 aa13.09□□□□□ -0.31
RFC4-203ENST00000411792 NIPSNAP3BQ9BS92 247 aa13.09□□□□□ -0.31
RFC4-203ENST00000411792 DKK2Q9UBU2 259 aa13.09□□□□□ -0.31
RFC4-203ENST00000411792 DEFB131BA0A096LNP1 70 aa13.08□□□□□ -0.32
RFC4-203ENST00000411792 IGLL5B9A064 214 aa13.08□□□□□ -0.32
RFC4-203ENST00000411792 H7BYZ3 331 aa13.08□□□□□ -0.32
RFC4-203ENST00000411792 ARPC5O15511 151 aa13.08□□□□□ -0.32
RFC4-203ENST00000411792 CDC34P49427 236 aaPredicted RBP13.08□□□□□ -0.32
RFC4-203ENST00000411792 SERF2P84101 59 aa13.08□□□□□ -0.32
RFC4-203ENST00000411792 FAM74A1Q5RGS3 127 aa13.08□□□□□ -0.32
RFC4-203ENST00000411792 TMEM78Q5T7P6 136 aa13.08□□□□□ -0.32
RFC4-203ENST00000411792 LINC00476Q8WZB0 136 aa13.08□□□□□ -0.32
RFC4-203ENST00000411792 Q9H3A6 140 aa13.08□□□□□ -0.32
RFC4-203ENST00000411792 ERCC8Q13216 396 aa13.07□□□□□ -0.32
RFC4-203ENST00000411792 GFI1BQ5VTD9 330 aa13.07□□□□□ -0.32
RFC4-203ENST00000411792 CCDC28AQ8IWP9 274 aa13.07□□□□□ -0.32
RFC4-203ENST00000411792 ZNF503Q96F45 646 aa13.07□□□□□ -0.32
RFC4-203ENST00000411792 SACSQ9NZJ4 4579 aa13.06□□□□□ -0.32
RFC4-203ENST00000411792 IGKV2-40A0A087WW87 121 aaPredicted RBP13.06□□□□□ -0.32
RFC4-203ENST00000411792 EIF3GO75821 320 aaKnown RBP eCLIP13.06□□□□□ -0.32
RFC4-203ENST00000411792 IGKV2D-40P01614 121 aaPredicted RBP13.06□□□□□ -0.32
RFC4-203ENST00000411792 DAD1P61803 113 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms