RNA–Protein interactions for RNA: ENST00000409987.5

LSM5-206, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5 BASIC

Gene LSM5, Length 504 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-206ENST00000409987 OR5A1Q8NGJ0 315 aa2.88□□□□□ -1.95
LSM5-206ENST00000409987 DCANP1Q8TF63 244 aa2.88□□□□□ -1.95
LSM5-206ENST00000409987 FGF13Q92913 245 aa2.88□□□□□ -1.95
LSM5-206ENST00000409987 SCGB3A1Q96QR1 104 aa2.88□□□□□ -1.95
LSM5-206ENST00000409987 OSTCQ9NRP0 149 aa2.88□□□□□ -1.95
LSM5-206ENST00000409987 NAT8Q9UHE5 227 aa2.88□□□□□ -1.95
LSM5-206ENST00000409987 MED31Q9Y3C7 131 aa2.88□□□□□ -1.95
LSM5-206ENST00000409987 FAM215AQ9Y5M1 114 aa2.88□□□□□ -1.95
LSM5-206ENST00000409987 NOTCH2Q04721 2471 aa2.88□□□□□ -1.95
LSM5-206ENST00000409987 NLRC5Q86WI3 1866 aa2.88□□□□□ -1.95
LSM5-206ENST00000409987 DOCK5Q9H7D0 1870 aa2.88□□□□□ -1.95
LSM5-206ENST00000409987 ARAP2Q8WZ64 1704 aa2.88□□□□□ -1.95
LSM5-206ENST00000409987 TRIP11Q15643 1979 aa2.87□□□□□ -1.95
LSM5-206ENST00000409987 PCM1Q15154 2024 aa2.87□□□□□ -1.95
LSM5-206ENST00000409987 FBN3Q75N90 2809 aa2.87□□□□□ -1.95
LSM5-206ENST00000409987 TRDV1A0A1B0GX56 115 aa2.87□□□□□ -1.95
LSM5-206ENST00000409987 TMEM189A5PLL7 270 aa2.87□□□□□ -1.95
LSM5-206ENST00000409987 H3BT86 120 aa2.87□□□□□ -1.95
LSM5-206ENST00000409987 NDUFA2O43678 99 aa2.87□□□□□ -1.95
LSM5-206ENST00000409987 GGCTO75223 188 aaKnown RBP2.87□□□□□ -1.95
LSM5-206ENST00000409987 BPGMP07738 259 aa2.87□□□□□ -1.95
LSM5-206ENST00000409987 MSMBP08118 114 aa2.87□□□□□ -1.95
LSM5-206ENST00000409987 ZNF728P0DKX0 622 aa2.87□□□□□ -1.95
LSM5-206ENST00000409987 S100A11P31949 105 aa2.87□□□□□ -1.95
LSM5-206ENST00000409987 PSG9Q00887 426 aa2.87□□□□□ -1.95
LSM5-206ENST00000409987 C1orf140Q5VVS0 124 aa2.87□□□□□ -1.95
LSM5-206ENST00000409987 AMMECR1LQ6DCA0 310 aa2.87□□□□□ -1.95
LSM5-206ENST00000409987 HRCT1Q6UXD1 115 aa2.87□□□□□ -1.95
LSM5-206ENST00000409987 DYNAPQ8N1N2 210 aa2.87□□□□□ -1.95
LSM5-206ENST00000409987 TMEM229BQ8NBD8 167 aa2.87□□□□□ -1.95
LSM5-206ENST00000409987 OR8J3Q8NGG0 315 aa2.87□□□□□ -1.95
LSM5-206ENST00000409987 WFDC5Q8TCV5 224 aa2.87□□□□□ -1.95
LSM5-206ENST00000409987 BORCS8Q96FH0 119 aa2.87□□□□□ -1.95
LSM5-206ENST00000409987 YIPF3Q9GZM5 350 aa2.87□□□□□ -1.95
LSM5-206ENST00000409987 TRAPPC2LQ9UL33 140 aa2.87□□□□□ -1.95
LSM5-206ENST00000409987 R4GN34 69 aa2.87□□□□□ -1.95
LSM5-206ENST00000409987 GBF1Q92538 1859 aa2.86□□□□□ -1.95
LSM5-206ENST00000409987 IGKV1-9A0A0C4DH69 117 aa2.86□□□□□ -1.95
LSM5-206ENST00000409987 H7BYZ3 331 aa2.86□□□□□ -1.95
LSM5-206ENST00000409987 OVOL1O14753 267 aa2.86□□□□□ -1.95
LSM5-206ENST00000409987 SLC22A1O15245 554 aa2.86□□□□□ -1.95
LSM5-206ENST00000409987 PSCAO43653 123 aa2.86□□□□□ -1.95
LSM5-206ENST00000409987 SYNGR2O43760 224 aa2.86□□□□□ -1.95
LSM5-206ENST00000409987 OR2T1O43869 369 aa2.86□□□□□ -1.95
LSM5-206ENST00000409987 CPSF4O95639 269 aaKnown RBP2.86□□□□□ -1.95
LSM5-206ENST00000409987 IGKV1-16P04430 117 aa2.86□□□□□ -1.95
LSM5-206ENST00000409987 FKBP2P26885 142 aaKnown RBP2.86□□□□□ -1.95
LSM5-206ENST00000409987 RPL28P46779 137 aaKnown RBP2.86□□□□□ -1.95
LSM5-206ENST00000409987 LY6EQ16553 131 aa2.86□□□□□ -1.95
LSM5-206ENST00000409987 DNLZQ5SXM8 178 aa2.86□□□□□ -1.95
LSM5-206ENST00000409987 PRR15Q8IV56 129 aa2.86□□□□□ -1.95
LSM5-206ENST00000409987 OR4C16Q8NGL9 310 aa2.86□□□□□ -1.95
LSM5-206ENST00000409987 PPTC7Q8NI37 304 aa2.86□□□□□ -1.95
LSM5-206ENST00000409987 YPEL2Q96QA6 119 aa2.86□□□□□ -1.95
LSM5-206ENST00000409987 PFDN5Q99471 154 aa2.86□□□□□ -1.95
LSM5-206ENST00000409987 SLC25A21Q9BQT8 299 aaPredicted RBP2.86□□□□□ -1.95
LSM5-206ENST00000409987 ASXL3Q9C0F0 2248 aa2.86□□□□□ -1.95
LSM5-206ENST00000409987 MGAQ8IWI9 3026 aa2.86□□□□□ -1.95
LSM5-206ENST00000409987 RFX7Q2KHR2 1363 aa2.86□□□□□ -1.95
LSM5-206ENST00000409987 RALGAPA2Q2PPJ7 1873 aa2.86□□□□□ -1.95
LSM5-206ENST00000409987 COL4A4P53420 1690 aaPredicted RBP2.85□□□□□ -1.95
LSM5-206ENST00000409987 MYO7AQ13402 2215 aa2.85□□□□□ -1.95
LSM5-206ENST00000409987 NUP205Q92621 2012 aa2.85□□□□□ -1.95
LSM5-206ENST00000409987 TRGV5A0A0B4J1U4 118 aa2.85□□□□□ -1.95
LSM5-206ENST00000409987 ARRDC5A6NEK1 342 aa2.85□□□□□ -1.95
LSM5-206ENST00000409987 GNRH2O43555 120 aa2.85□□□□□ -1.95
LSM5-206ENST00000409987 ZNF14P17017 642 aaPredicted RBP2.85□□□□□ -1.95
LSM5-206ENST00000409987 NFYAP23511 347 aaPredicted RBP2.85□□□□□ -1.95
LSM5-206ENST00000409987 UBE2BP63146 152 aa2.85□□□□□ -1.95
LSM5-206ENST00000409987 FOXF1Q12946 379 aa2.85□□□□□ -1.95
LSM5-206ENST00000409987 EIF3IQ13347 325 aaKnown RBP2.85□□□□□ -1.95
LSM5-206ENST00000409987 SPCS2Q15005 226 aa2.85□□□□□ -1.95
LSM5-206ENST00000409987 HMGN2P46Q86SG4 172 aa2.85□□□□□ -1.95
LSM5-206ENST00000409987 LHFPL1Q86WI0 220 aa2.85□□□□□ -1.95
LSM5-206ENST00000409987 RNF182Q8N6D2 247 aa2.85□□□□□ -1.95
LSM5-206ENST00000409987 PFN4Q8NHR9 129 aa2.85□□□□□ -1.95
LSM5-206ENST00000409987 HIST1H2BLQ99880 126 aa2.85□□□□□ -1.95
LSM5-206ENST00000409987 GINS4Q9BRT9 223 aa2.85□□□□□ -1.95
LSM5-206ENST00000409987 HIGD2AQ9BW72 106 aa2.85□□□□□ -1.95
LSM5-206ENST00000409987 TPT1P8Q9HAU6 139 aa2.85□□□□□ -1.95
LSM5-206ENST00000409987 OTORQ9NRC9 128 aa2.85□□□□□ -1.95
LSM5-206ENST00000409987 HSPB8Q9UJY1 196 aa2.85□□□□□ -1.95
LSM5-206ENST00000409987 DSCAMO60469 2012 aa2.85□□□□□ -1.95
LSM5-206ENST00000409987 PTPRFP10586 1907 aa2.84□□□□□ -1.95
LSM5-206ENST00000409987 SCN10AQ9Y5Y9 1956 aa2.84□□□□□ -1.95
LSM5-206ENST00000409987 C11orf86A6NJI1 115 aa2.84□□□□□ -1.95
LSM5-206ENST00000409987 GABARAPH6UMI1 98 aa2.84□□□□□ -1.95
LSM5-206ENST00000409987 TMEM256-PLSCR3K7ERE1 68 aa2.84□□□□□ -1.95
LSM5-206ENST00000409987 COX4I1P13073 169 aa2.84□□□□□ -1.95
LSM5-206ENST00000409987 LGALS3P17931 250 aaKnown RBP2.84□□□□□ -1.95
LSM5-206ENST00000409987 RNASE4P34096 147 aaKnown RBP2.84□□□□□ -1.95
LSM5-206ENST00000409987 EIF2B2P49770 351 aaKnown RBP2.84□□□□□ -1.95
LSM5-206ENST00000409987 IFT20Q8IY31 132 aa2.84□□□□□ -1.95
LSM5-206ENST00000409987 SIGLECL1Q8N7X8 197 aa2.84□□□□□ -1.95
LSM5-206ENST00000409987 DEDD2Q8WXF8 326 aa2.84□□□□□ -1.95
LSM5-206ENST00000409987 MRPL32Q9BYC8 188 aaKnown RBP2.84□□□□□ -1.95
LSM5-206ENST00000409987 OR2H1Q9GZK4 316 aa2.84□□□□□ -1.95
LSM5-206ENST00000409987 COPZ2Q9P299 210 aa2.84□□□□□ -1.95
LSM5-206ENST00000409987 PAIP2BQ9ULR5 123 aaKnown RBP2.84□□□□□ -1.95
LSM5-206ENST00000409987 TIMM9Q9Y5J7 89 aa2.84□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms