RNA–Protein interactions for RNA: ENST00000409954.6

MCF2L-210, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 574 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-210ENST00000409954 HBG1P69891 147 aa10.19□□□□□ -0.78
MCF2L-210ENST00000409954 HBG2P69892 147 aa10.19□□□□□ -0.78
MCF2L-210ENST00000409954 VWC2Q2TAL6 325 aa10.19□□□□□ -0.78
MCF2L-210ENST00000409954 RNASE8Q8TDE3 154 aaKnown RBP10.19□□□□□ -0.78
MCF2L-210ENST00000409954 CCDC32Q9BV29 185 aa10.19□□□□□ -0.78
MCF2L-210ENST00000409954 C11orf1Q9H5F2 150 aa10.19□□□□□ -0.78
MCF2L-210ENST00000409954 IL15RAQ13261 267 aa10.18□□□□□ -0.78
MCF2L-210ENST00000409954 MORN5Q5VZ52 161 aa10.18□□□□□ -0.78
MCF2L-210ENST00000409954 MIC13Q5XKP0 118 aa10.18□□□□□ -0.78
MCF2L-210ENST00000409954 LINC00299Q6ZSB3 139 aa10.18□□□□□ -0.78
MCF2L-210ENST00000409954 ODF3Q96PU9 254 aa10.18□□□□□ -0.78
MCF2L-210ENST00000409954 LYRM2Q9NU23 88 aaPredicted RBP10.18□□□□□ -0.78
MCF2L-210ENST00000409954 SLC39A9Q9NUM3 307 aa10.18□□□□□ -0.78
MCF2L-210ENST00000409954 NUDT15Q9NV35 164 aa10.18□□□□□ -0.78
MCF2L-210ENST00000409954 HECTD4Q9Y4D8 3996 aa10.17□□□□□ -0.78
MCF2L-210ENST00000409954 PRAC2D3DTV9 90 aa10.17□□□□□ -0.78
MCF2L-210ENST00000409954 LEPP41159 167 aa10.17□□□□□ -0.78
MCF2L-210ENST00000409954 CLINT1Q14677 625 aa10.17□□□□□ -0.78
MCF2L-210ENST00000409954 STX12Q86Y82 276 aa10.17□□□□□ -0.78
MCF2L-210ENST00000409954 TMEM252Q8N6L7 170 aa10.17□□□□□ -0.78
MCF2L-210ENST00000409954 ZNRF2Q8NHG8 242 aa10.17□□□□□ -0.78
MCF2L-210ENST00000409954 MRPL53Q96EL3 112 aaKnown RBP10.17□□□□□ -0.78
MCF2L-210ENST00000409954 ZNF503Q96F45 646 aa10.17□□□□□ -0.78
MCF2L-210ENST00000409954 LINC00477Q96M19 166 aa10.17□□□□□ -0.78
MCF2L-210ENST00000409954 SEC22CQ9BRL7 303 aa10.17□□□□□ -0.78
MCF2L-210ENST00000409954 PRELID1Q9Y255 219 aa10.17□□□□□ -0.78
MCF2L-210ENST00000409954 HERC2O95714 4834 aa10.17□□□□□ -0.78
MCF2L-210ENST00000409954 TRAV5A0A0B4J249 113 aa10.16□□□□□ -0.78
MCF2L-210ENST00000409954 NBDYA0A0U1RRE5 68 aa10.16□□□□□ -0.78
MCF2L-210ENST00000409954 FAM240BA0A1B0GVZ2 78 aa10.16□□□□□ -0.78
MCF2L-210ENST00000409954 SNURFLB1AK76 121 aa10.16□□□□□ -0.78
MCF2L-210ENST00000409954 H3BTX0 84 aa10.16□□□□□ -0.78
MCF2L-210ENST00000409954 SLC17A3O00476 420 aa10.16□□□□□ -0.78
MCF2L-210ENST00000409954 MPDU1O75352 247 aa10.16□□□□□ -0.78
MCF2L-210ENST00000409954 CT45A10P0DMU9 189 aa10.16□□□□□ -0.78
MCF2L-210ENST00000409954 OR5I1Q13606 314 aa10.16□□□□□ -0.78
MCF2L-210ENST00000409954 GFI1BQ5VTD9 330 aa10.16□□□□□ -0.78
MCF2L-210ENST00000409954 MZT2BQ6NZ67 158 aa10.16□□□□□ -0.78
MCF2L-210ENST00000409954 LINC00612Q8N6U2 182 aa10.16□□□□□ -0.78
MCF2L-210ENST00000409954 PYGO2Q9BRQ0 406 aa10.16□□□□□ -0.78
MCF2L-210ENST00000409954 ZNF586Q9NXT0 402 aa10.16□□□□□ -0.78
MCF2L-210ENST00000409954 TMEM14CQ9P0S9 112 aa10.16□□□□□ -0.78
MCF2L-210ENST00000409954 DNAH17Q9UFH2 4485 aa10.16□□□□□ -0.78
MCF2L-210ENST00000409954 TRBV19A0A075B6N1 114 aa10.15□□□□□ -0.78
MCF2L-210ENST00000409954 NPIPB6E9PJ23 425 aa10.15□□□□□ -0.78
MCF2L-210ENST00000409954 RLN2P04090 185 aa10.15□□□□□ -0.78
MCF2L-210ENST00000409954 SLC25A5P05141 298 aaKnown RBP10.15□□□□□ -0.78
MCF2L-210ENST00000409954 HIST1H1EP10412 219 aaKnown RBP10.15□□□□□ -0.78
MCF2L-210ENST00000409954 S100A10P60903 97 aa10.15□□□□□ -0.78
MCF2L-210ENST00000409954 BAXQ07812 192 aa10.15□□□□□ -0.78
MCF2L-210ENST00000409954 DAZ2Q13117 558 aaKnown RBP10.15□□□□□ -0.78
MCF2L-210ENST00000409954 RAB32Q13637 225 aa10.15□□□□□ -0.78
MCF2L-210ENST00000409954 KIR3DS1Q14943 382 aa10.15□□□□□ -0.78
MCF2L-210ENST00000409954 RNF141Q8WVD5 230 aa10.15□□□□□ -0.78
MCF2L-210ENST00000409954 GNPNAT1Q96EK6 184 aaPredicted RBP10.15□□□□□ -0.78
MCF2L-210ENST00000409954 TRAV12-3A0A0B4J271 114 aa10.14□□□□□ -0.79
MCF2L-210ENST00000409954 H3BNG1 76 aa10.14□□□□□ -0.79
MCF2L-210ENST00000409954 PRB4P10163 310 aaPredicted RBP10.14□□□□□ -0.79
MCF2L-210ENST00000409954 M6PRP20645 277 aa10.14□□□□□ -0.79
MCF2L-210ENST00000409954 PDE6HQ13956 83 aa10.14□□□□□ -0.79
MCF2L-210ENST00000409954 RXFP4Q8TDU9 374 aa10.14□□□□□ -0.79
MCF2L-210ENST00000409954 LINC00588Q9Y4M8 146 aa10.14□□□□□ -0.79
MCF2L-210ENST00000409954 TIMM9Q9Y5J7 89 aa10.14□□□□□ -0.79
MCF2L-210ENST00000409954 DNAH2Q9P225 4427 aa10.13□□□□□ -0.79
MCF2L-210ENST00000409954 IGSF23A1L1A6 192 aa10.13□□□□□ -0.79
MCF2L-210ENST00000409954 SSX7Q7RTT5 188 aa10.13□□□□□ -0.79
MCF2L-210ENST00000409954 C6orf223Q8N319 242 aa10.13□□□□□ -0.79
MCF2L-210ENST00000409954 S100ZQ8WXG8 99 aa10.13□□□□□ -0.79
MCF2L-210ENST00000409954 PARD6GQ9BYG4 376 aaPredicted RBP10.13□□□□□ -0.79
MCF2L-210ENST00000409954 SLC25A31Q9H0C2 315 aa10.13□□□□□ -0.79
MCF2L-210ENST00000409954 Q9H8V8 135 aa10.13□□□□□ -0.79
MCF2L-210ENST00000409954 GPN1Q9HCN4 374 aaPredicted RBP10.13□□□□□ -0.79
MCF2L-210ENST00000409954 FAT2Q9NYQ8 4349 aa10.12□□□□□ -0.79
MCF2L-210ENST00000409954 TRAV26-1A0A087WT03 109 aa10.12□□□□□ -0.79
MCF2L-210ENST00000409954 UBE2L5PA0A1B0GUS4 154 aa10.12□□□□□ -0.79
MCF2L-210ENST00000409954 GAGE12BA1L429 117 aa10.12□□□□□ -0.79
MCF2L-210ENST00000409954 GAGE7O76087 117 aa10.12□□□□□ -0.79
MCF2L-210ENST00000409954 NMBP08949 121 aa10.12□□□□□ -0.79
MCF2L-210ENST00000409954 GAGE12FP0CL80 117 aa10.12□□□□□ -0.79
MCF2L-210ENST00000409954 GAGE12GP0CL81 117 aa10.12□□□□□ -0.79
MCF2L-210ENST00000409954 GAGE12IP0CL82 117 aa10.12□□□□□ -0.79
MCF2L-210ENST00000409954 FGF7P21781 194 aa10.12□□□□□ -0.79
MCF2L-210ENST00000409954 CYCSP99999 105 aaKnown RBP10.12□□□□□ -0.79
MCF2L-210ENST00000409954 LINC00467Q9BRT7 94 aa10.12□□□□□ -0.79
MCF2L-210ENST00000409954 AAMDCQ9H7C9 122 aa10.12□□□□□ -0.79
MCF2L-210ENST00000409954 J3KRW8 73 aa10.11□□□□□ -0.79
MCF2L-210ENST00000409954 ZNF680Q8NEM1 530 aa10.11□□□□□ -0.79
MCF2L-210ENST00000409954 C18orf15Q96N68 181 aa10.11□□□□□ -0.79
MCF2L-210ENST00000409954 AGPAT4-IT1Q9H0P7 198 aa10.11□□□□□ -0.79
MCF2L-210ENST00000409954 C7orf71A4D174 169 aa10.1□□□□□ -0.79
MCF2L-210ENST00000409954 E5RGE8 158 aa10.1□□□□□ -0.79
MCF2L-210ENST00000409954 M0R3E3 92 aa10.1□□□□□ -0.79
MCF2L-210ENST00000409954 ZNF324O75467 553 aaPredicted RBP10.1□□□□□ -0.79
MCF2L-210ENST00000409954 NDUFB4O95168 129 aa10.1□□□□□ -0.79
MCF2L-210ENST00000409954 NBEAP1P0C6P0 100 aa10.1□□□□□ -0.79
MCF2L-210ENST00000409954 BTF3P20290 206 aaKnown RBP10.1□□□□□ -0.79
MCF2L-210ENST00000409954 NHLH2Q02577 135 aa10.1□□□□□ -0.79
MCF2L-210ENST00000409954 ASAH1Q13510 395 aa10.1□□□□□ -0.79
MCF2L-210ENST00000409954 ANXA2RQ3ZCQ2 193 aa10.1□□□□□ -0.79
MCF2L-210ENST00000409954 C9orf47Q6ZRZ4 202 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms