RNA–Protein interactions for RNA: ENST00000409782.5

LSM5-203, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5 BASIC

Gene LSM5, Length 649 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-203ENST00000409782 RTBDNQ9BSG5 229 aaPredicted RBP4.38□□□□□ -1.71
LSM5-203ENST00000409782 ACTR3CQ9C0K3 210 aaPredicted RBP4.38□□□□□ -1.71
LSM5-203ENST00000409782 TUBA4BQ9H853 241 aa4.38□□□□□ -1.71
LSM5-203ENST00000409782 ENY2Q9NPA8 101 aa4.38□□□□□ -1.71
LSM5-203ENST00000409782 MCUBQ9NWR8 336 aa4.38□□□□□ -1.71
LSM5-203ENST00000409782 V9GYH0 126 aa4.38□□□□□ -1.71
LSM5-203ENST00000409782 NBEAL2Q6ZNJ1 2754 aa4.38□□□□□ -1.71
LSM5-203ENST00000409782 IGHV3-21A0A0B4J1V1 117 aa4.37□□□□□ -1.71
LSM5-203ENST00000409782 A0A0B4J2A0 478 aa4.37□□□□□ -1.71
LSM5-203ENST00000409782 C3orf84H3BNL1 204 aa4.37□□□□□ -1.71
LSM5-203ENST00000409782 GNG7O60262 68 aa4.37□□□□□ -1.71
LSM5-203ENST00000409782 EIF3GO75821 320 aaKnown RBP eCLIP4.37□□□□□ -1.71
LSM5-203ENST00000409782 MBP02144 154 aa4.37□□□□□ -1.71
LSM5-203ENST00000409782 CTSGP08311 255 aa4.37□□□□□ -1.71
LSM5-203ENST00000409782 CD7P09564 240 aa4.37□□□□□ -1.71
LSM5-203ENST00000409782 RNASE2P10153 161 aaKnown RBP4.37□□□□□ -1.71
LSM5-203ENST00000409782 ETV6P41212 452 aa4.37□□□□□ -1.71
LSM5-203ENST00000409782 HTR2BP41595 481 aa4.37□□□□□ -1.71
LSM5-203ENST00000409782 SPCS3P61009 180 aa4.37□□□□□ -1.71
LSM5-203ENST00000409782 ZNF79Q15937 498 aa4.37□□□□□ -1.71
LSM5-203ENST00000409782 Q1RN00 199 aa4.37□□□□□ -1.71
LSM5-203ENST00000409782 PYDC2Q56P42 97 aa4.37□□□□□ -1.71
LSM5-203ENST00000409782 SPINK9Q5DT21 86 aa4.37□□□□□ -1.71
LSM5-203ENST00000409782 LINC00322Q6ZN03 302 aaPredicted RBP4.37□□□□□ -1.71
LSM5-203ENST00000409782 SELENOHQ8IZQ5 122 aaKnown RBP4.37□□□□□ -1.71
LSM5-203ENST00000409782 TOMM5Q8N4H5 51 aa4.37□□□□□ -1.71
LSM5-203ENST00000409782 INO80EQ8NBZ0 244 aaPredicted RBP4.37□□□□□ -1.71
LSM5-203ENST00000409782 DUSP18Q8NEJ0 188 aa4.37□□□□□ -1.71
LSM5-203ENST00000409782 MUC7Q8TAX7 377 aa4.37□□□□□ -1.71
LSM5-203ENST00000409782 GTSF1Q8WW33 167 aa4.37□□□□□ -1.71
LSM5-203ENST00000409782 TMEM230Q96A57 120 aa4.37□□□□□ -1.71
LSM5-203ENST00000409782 OR10C1Q96KK4 312 aa4.37□□□□□ -1.71
LSM5-203ENST00000409782 GINS3Q9BRX5 216 aa4.37□□□□□ -1.71
LSM5-203ENST00000409782 CTNNBIP1Q9NSA3 81 aaPredicted RBP4.37□□□□□ -1.71
LSM5-203ENST00000409782 SHPKQ9UHJ6 478 aa4.37□□□□□ -1.71
LSM5-203ENST00000409782 TMEM56-RWDD3S4R434 201 aa4.37□□□□□ -1.71
LSM5-203ENST00000409782 IGHV7-4-1A0A0J9YVY3 117 aa4.36□□□□□ -1.71
LSM5-203ENST00000409782 DUXBA0A1W2PPF3 345 aa4.36□□□□□ -1.71
LSM5-203ENST00000409782 OR4C46A6NHA9 309 aa4.36□□□□□ -1.71
LSM5-203ENST00000409782 OR11H12B2RN74 326 aa4.36□□□□□ -1.71
LSM5-203ENST00000409782 CD5P06127 495 aa4.36□□□□□ -1.71
LSM5-203ENST00000409782 SULT1A3P0DMM9 295 aa4.36□□□□□ -1.71
LSM5-203ENST00000409782 SULT1A4P0DMN0 295 aa4.36□□□□□ -1.71
LSM5-203ENST00000409782 OPRK1P41145 380 aa4.36□□□□□ -1.71
LSM5-203ENST00000409782 NMSQ5H8A3 153 aa4.36□□□□□ -1.71
LSM5-203ENST00000409782 SOHLH1Q5JUK2 328 aa4.36□□□□□ -1.71
LSM5-203ENST00000409782 LAMTOR1Q6IAA8 161 aa4.36□□□□□ -1.71
LSM5-203ENST00000409782 GSG1LQ6UXU4 331 aa4.36□□□□□ -1.71
LSM5-203ENST00000409782 LGI3Q8N145 548 aa4.36□□□□□ -1.71
LSM5-203ENST00000409782 DEFB125Q8N687 156 aa4.36□□□□□ -1.71
LSM5-203ENST00000409782 OR4X1Q8NH49 305 aa4.36□□□□□ -1.71
LSM5-203ENST00000409782 RNASEH2CQ8TDP1 164 aaKnown RBP4.36□□□□□ -1.71
LSM5-203ENST00000409782 GPR146Q96CH1 333 aa4.36□□□□□ -1.71
LSM5-203ENST00000409782 ZNF414Q96IQ9 312 aa4.36□□□□□ -1.71
LSM5-203ENST00000409782 SLC25A21Q9BQT8 299 aaPredicted RBP4.36□□□□□ -1.71
LSM5-203ENST00000409782 GGTLC1Q9BX51 225 aa4.36□□□□□ -1.71
LSM5-203ENST00000409782 SRRQ9GZT4 340 aa4.36□□□□□ -1.71
LSM5-203ENST00000409782 WFDC10AQ9H1F0 79 aa4.36□□□□□ -1.71
LSM5-203ENST00000409782 EDA2RQ9HAV5 297 aa4.36□□□□□ -1.71
LSM5-203ENST00000409782 SMPXQ9UHP9 88 aa4.36□□□□□ -1.71
LSM5-203ENST00000409782 RYR2Q92736 4967 aa4.35□□□□□ -1.71
LSM5-203ENST00000409782 FAM231BA6NCW3 169 aa4.35□□□□□ -1.71
LSM5-203ENST00000409782 RBMY1BA6NDE4 496 aaKnown RBP4.35□□□□□ -1.71
LSM5-203ENST00000409782 RBMY1EA6NEQ0 496 aaKnown RBP4.35□□□□□ -1.71
LSM5-203ENST00000409782 LYRM9A8MSI8 78 aa4.35□□□□□ -1.71
LSM5-203ENST00000409782 CEBPZOSA8MTT3 80 aa4.35□□□□□ -1.71
LSM5-203ENST00000409782 AGPAT2O15120 278 aa4.35□□□□□ -1.71
LSM5-203ENST00000409782 YIF1AO95070 293 aa4.35□□□□□ -1.71
LSM5-203ENST00000409782 RBMY1DP0C7P1 496 aaKnown RBP4.35□□□□□ -1.71
LSM5-203ENST00000409782 SLC25A4P12235 298 aa4.35□□□□□ -1.71
LSM5-203ENST00000409782 AKR1C4P17516 323 aa4.35□□□□□ -1.71
LSM5-203ENST00000409782 NPY1RP25929 384 aa4.35□□□□□ -1.71
LSM5-203ENST00000409782 CCR6P51684 374 aa4.35□□□□□ -1.71
LSM5-203ENST00000409782 UBE2MP61081 183 aaKnown RBP4.35□□□□□ -1.71
LSM5-203ENST00000409782 SUPT4H1P63272 117 aaKnown RBP4.35□□□□□ -1.71
LSM5-203ENST00000409782 TNFRSF9Q07011 255 aa4.35□□□□□ -1.71
LSM5-203ENST00000409782 SMCO1Q147U7 214 aa4.35□□□□□ -1.71
LSM5-203ENST00000409782 HIGD2BQ4VC39 106 aa4.35□□□□□ -1.71
LSM5-203ENST00000409782 C2orf83Q53S99 150 aa4.35□□□□□ -1.71
LSM5-203ENST00000409782 TRIQKQ629K1 86 aa4.35□□□□□ -1.71
LSM5-203ENST00000409782 TOMM20LQ6UXN7 152 aa4.35□□□□□ -1.71
LSM5-203ENST00000409782 TMED4Q7Z7H5 227 aa4.35□□□□□ -1.71
LSM5-203ENST00000409782 VSIG2Q96IQ7 327 aa4.35□□□□□ -1.71
LSM5-203ENST00000409782 VGLL1Q99990 258 aa4.35□□□□□ -1.71
LSM5-203ENST00000409782 RHPN1-AS1Q9BWJ2 59 aa4.35□□□□□ -1.71
LSM5-203ENST00000409782 PUS1Q9Y606 427 aaKnown RBP eCLIP4.35□□□□□ -1.71
LSM5-203ENST00000409782 RYR3Q15413 4870 aa4.34□□□□□ -1.71
LSM5-203ENST00000409782 IGHV3OR16-8A0A075B7F1 116 aa4.34□□□□□ -1.71
LSM5-203ENST00000409782 TRAV30A0A087WSZ9 112 aa4.34□□□□□ -1.71
LSM5-203ENST00000409782 LOC102724200A0A096LPH7 203 aaPredicted RBP4.34□□□□□ -1.71
LSM5-203ENST00000409782 TRAV14DV4A0A0A6YYC5 116 aa4.34□□□□□ -1.71
LSM5-203ENST00000409782 TRAV2A0A0B4J234 112 aa4.34□□□□□ -1.71
LSM5-203ENST00000409782 KIR2DL5BA0A0G2JN68 375 aa4.34□□□□□ -1.71
LSM5-203ENST00000409782 KIR2DL5BA0A0G2JPC4 375 aa4.34□□□□□ -1.71
LSM5-203ENST00000409782 NAP1L6A6NFF2 107 aa4.34□□□□□ -1.71
LSM5-203ENST00000409782 KRTAP16-1A8MUX0 517 aa4.34□□□□□ -1.71
LSM5-203ENST00000409782 ZNF207O43670 478 aaKnown RBP4.34□□□□□ -1.71
LSM5-203ENST00000409782 SFT2D2O95562 160 aa4.34□□□□□ -1.71
LSM5-203ENST00000409782 IGKV1-17P01599 117 aa4.34□□□□□ -1.71
LSM5-203ENST00000409782 IGLC1P0CG04 106 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 118.8 ms