RNA–Protein interactions for RNA: ENST00000409739.2

TRAF3IP1-203, Transcript of TRAF3 interacting protein 1, humanhuman

TSL 3

Gene TRAF3IP1, Length 1,070 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-203ENST00000409739 OR10J4P0C629 311 aa22.48■■□□□ 1.19
TRAF3IP1-203ENST00000409739 M6PRP20645 277 aa22.48■■□□□ 1.19
TRAF3IP1-203ENST00000409739 C11orf45Q8TAV5 145 aa22.48■■□□□ 1.19
TRAF3IP1-203ENST00000409739 GOLT1BQ9Y3E0 138 aa22.48■■□□□ 1.19
TRAF3IP1-203ENST00000409739 SMLR1H3BR10 107 aa22.47■■□□□ 1.19
TRAF3IP1-203ENST00000409739 M0R3E3 92 aa22.47■■□□□ 1.19
TRAF3IP1-203ENST00000409739 NBEAP1P0C6P0 100 aa22.47■■□□□ 1.19
TRAF3IP1-203ENST00000409739 NANOS2P60321 138 aaKnown RBP22.47■■□□□ 1.19
TRAF3IP1-203ENST00000409739 RAB2AP61019 212 aa22.47■■□□□ 1.19
TRAF3IP1-203ENST00000409739 BAP18Q8IXM2 172 aa22.47■■□□□ 1.19
TRAF3IP1-203ENST00000409739 OR10J6PQ8NGY7 276 aa22.47■■□□□ 1.19
TRAF3IP1-203ENST00000409739 RNF141Q8WVD5 230 aa22.47■■□□□ 1.19
TRAF3IP1-203ENST00000409739 ATP6V0CP27449 155 aa22.46■■□□□ 1.19
TRAF3IP1-203ENST00000409739 KHDC3LQ587J8 217 aa22.46■■□□□ 1.19
TRAF3IP1-203ENST00000409739 EXOC3-AS1Q8N2X6 119 aa22.46■■□□□ 1.19
TRAF3IP1-203ENST00000409739 PSMG3Q9BT73 122 aaPredicted RBP22.46■■□□□ 1.19
TRAF3IP1-203ENST00000409739 PPP1R14DQ9NXH3 145 aa22.46■■□□□ 1.19
TRAF3IP1-203ENST00000409739 EIF3GO75821 320 aaKnown RBP eCLIP22.45■■□□□ 1.18
TRAF3IP1-203ENST00000409739 INSP01308 110 aa22.45■■□□□ 1.18
TRAF3IP1-203ENST00000409739 TAS2R45P59539 299 aa22.45■■□□□ 1.18
TRAF3IP1-203ENST00000409739 OR2G3Q8NGZ4 309 aa22.45■■□□□ 1.18
TRAF3IP1-203ENST00000409739 PRELID1Q9Y255 219 aa22.45■■□□□ 1.18
TRAF3IP1-203ENST00000409739 DYNC2H1Q8NCM8 4307 aaKnown RBP22.44■■□□□ 1.18
TRAF3IP1-203ENST00000409739 TRAV12-2A0A075B6T6 113 aa22.44■■□□□ 1.18
TRAF3IP1-203ENST00000409739 SMIM9A6NGZ8 99 aa22.44■■□□□ 1.18
TRAF3IP1-203ENST00000409739 ARPC5O15511 151 aa22.44■■□□□ 1.18
TRAF3IP1-203ENST00000409739 UBE2L3P68036 154 aaKnown RBP22.44■■□□□ 1.18
TRAF3IP1-203ENST00000409739 RPL7L1Q6DKI1 246 aaKnown RBP22.44■■□□□ 1.18
TRAF3IP1-203ENST00000409739 PHYHIPLQ96FC7 376 aa22.44■■□□□ 1.18
TRAF3IP1-203ENST00000409739 AAMDCQ9H7C9 122 aa22.44■■□□□ 1.18
TRAF3IP1-203ENST00000409739 NUPR2A6NF83 97 aa22.43■■□□□ 1.18
TRAF3IP1-203ENST00000409739 SH3BGRL3Q9H299 93 aa22.43■■□□□ 1.18
TRAF3IP1-203ENST00000409739 NPIPB6E9PJ23 425 aa22.42■■□□□ 1.18
TRAF3IP1-203ENST00000409739 ICAM4Q14773 271 aa22.42■■□□□ 1.18
TRAF3IP1-203ENST00000409739 FAM122CQ6P4D5 195 aa22.42■■□□□ 1.18
TRAF3IP1-203ENST00000409739 OR10G4Q8NGN3 311 aa22.42■■□□□ 1.18
TRAF3IP1-203ENST00000409739 OR10G9Q8NGN4 311 aa22.42■■□□□ 1.18
TRAF3IP1-203ENST00000409739 OR10G7Q8NGN6 311 aa22.42■■□□□ 1.18
TRAF3IP1-203ENST00000409739 A0A1W2PPV4 95 aa22.41■■□□□ 1.18
TRAF3IP1-203ENST00000409739 PHLDA1Q8WV24 401 aaPredicted RBP22.41■■□□□ 1.18
TRAF3IP1-203ENST00000409739 TMEM208Q9BTX3 173 aa22.41■■□□□ 1.18
TRAF3IP1-203ENST00000409739 CELA1Q9UNI1 258 aa22.41■■□□□ 1.18
TRAF3IP1-203ENST00000409739 LYSTQ99698 3801 aa22.4■■□□□ 1.18
TRAF3IP1-203ENST00000409739 BORCS7-ASMTA0A0B4J1R7 106 aa22.4■■□□□ 1.18
TRAF3IP1-203ENST00000409739 CDKN1BP46527 198 aa22.4■■□□□ 1.18
TRAF3IP1-203ENST00000409739 CEMP1Q6PRD7 247 aaPredicted RBP22.4■■□□□ 1.18
TRAF3IP1-203ENST00000409739 HBE1P02100 147 aa22.39■■□□□ 1.17
TRAF3IP1-203ENST00000409739 RPP25LQ8N5L8 163 aaKnown RBP22.39■■□□□ 1.17
TRAF3IP1-203ENST00000409739 CT45A10P0DMU9 189 aa22.38■■□□□ 1.17
TRAF3IP1-203ENST00000409739 SERF2P84101 59 aa22.38■■□□□ 1.17
TRAF3IP1-203ENST00000409739 ODF3Q96PU9 254 aa22.38■■□□□ 1.17
TRAF3IP1-203ENST00000409739 TMEM189A5PLL7 270 aa22.37■■□□□ 1.17
TRAF3IP1-203ENST00000409739 CDC34P49427 236 aaPredicted RBP22.37■■□□□ 1.17
TRAF3IP1-203ENST00000409739 KIR3DS1Q14943 382 aa22.37■■□□□ 1.17
TRAF3IP1-203ENST00000409739 RRN3P1Q2M238 152 aa22.37■■□□□ 1.17
TRAF3IP1-203ENST00000409739 PQLC2Q6ZP29 291 aa22.37■■□□□ 1.17
TRAF3IP1-203ENST00000409739 GNPNAT1Q96EK6 184 aaPredicted RBP22.37■■□□□ 1.17
TRAF3IP1-203ENST00000409739 HMGB3O15347 200 aaKnown RBP22.36■■□□□ 1.17
TRAF3IP1-203ENST00000409739 RANP62826 216 aaKnown RBP22.36■■□□□ 1.17
TRAF3IP1-203ENST00000409739 Q9H3A6 140 aa22.36■■□□□ 1.17
TRAF3IP1-203ENST00000409739 IGKV2-40A0A087WW87 121 aaPredicted RBP22.35■■□□□ 1.17
TRAF3IP1-203ENST00000409739 LOC102723971A0A1B0GUV8 181 aa22.35■■□□□ 1.17
TRAF3IP1-203ENST00000409739 TAAR5O14804 337 aa22.35■■□□□ 1.17
TRAF3IP1-203ENST00000409739 IGKV2D-40P01614 121 aaPredicted RBP22.35■■□□□ 1.17
TRAF3IP1-203ENST00000409739 MBP02144 154 aa22.35■■□□□ 1.17
TRAF3IP1-203ENST00000409739 TSPOP30536 169 aa22.35■■□□□ 1.17
TRAF3IP1-203ENST00000409739 EMP1P54849 157 aa22.35■■□□□ 1.17
TRAF3IP1-203ENST00000409739 ERCC8Q13216 396 aa22.35■■□□□ 1.17
TRAF3IP1-203ENST00000409739 LYPD1Q8N2G4 141 aa22.35■■□□□ 1.17
TRAF3IP1-203ENST00000409739 OR11H4Q8NGC9 324 aa22.35■■□□□ 1.17
TRAF3IP1-203ENST00000409739 LCE6AA0A183 80 aa22.34■■□□□ 1.17
TRAF3IP1-203ENST00000409739 TMEM256Q8N2U0 113 aa22.34■■□□□ 1.17
TRAF3IP1-203ENST00000409739 CYTL1Q9NRR1 136 aa22.34■■□□□ 1.17
TRAF3IP1-203ENST00000409739 ZNF705GA8MUZ8 300 aaPredicted RBP22.33■■□□□ 1.17
TRAF3IP1-203ENST00000409739 PRM2P04554 102 aa22.33■■□□□ 1.17
TRAF3IP1-203ENST00000409739 ARL14EPLP0DKL9 152 aa22.33■■□□□ 1.17
TRAF3IP1-203ENST00000409739 LEPP41159 167 aa22.33■■□□□ 1.17
TRAF3IP1-203ENST00000409739 ZNF345Q14585 488 aa22.33■■□□□ 1.17
TRAF3IP1-203ENST00000409739 GFI1BQ5VTD9 330 aa22.33■■□□□ 1.17
TRAF3IP1-203ENST00000409739 RAB24Q969Q5 203 aa22.33■■□□□ 1.17
TRAF3IP1-203ENST00000409739 KLK5Q9Y337 293 aaPredicted RBP22.33■■□□□ 1.17
TRAF3IP1-203ENST00000409739 JTBO76095 146 aa22.32■■□□□ 1.16
TRAF3IP1-203ENST00000409739 STAG3L2P0CL84 134 aa22.32■■□□□ 1.16
TRAF3IP1-203ENST00000409739 STAG3L3P0CL85 134 aa22.32■■□□□ 1.16
TRAF3IP1-203ENST00000409739 PLECQ15149 4684 aaKnown RBP22.32■■□□□ 1.16
TRAF3IP1-203ENST00000409739 C9orf47Q6ZRZ4 202 aa22.32■■□□□ 1.16
TRAF3IP1-203ENST00000409739 Q6ZTC4 211 aa22.32■■□□□ 1.16
TRAF3IP1-203ENST00000409739 AGPAT4-IT1Q9H0P7 198 aa22.32■■□□□ 1.16
TRAF3IP1-203ENST00000409739 SACSQ9NZJ4 4579 aa22.31■■□□□ 1.16
TRAF3IP1-203ENST00000409739 HMSDA8MTL9 139 aa22.31■■□□□ 1.16
TRAF3IP1-203ENST00000409739 C12orf74Q32Q52 190 aa22.31■■□□□ 1.16
TRAF3IP1-203ENST00000409739 ZNF767PQ75MW2 155 aa22.31■■□□□ 1.16
TRAF3IP1-203ENST00000409739 KCNRGQ8N5I3 272 aa22.31■■□□□ 1.16
TRAF3IP1-203ENST00000409739 LINC00477Q96M19 166 aa22.31■■□□□ 1.16
TRAF3IP1-203ENST00000409739 LINC01587Q99440 93 aa22.31■■□□□ 1.16
TRAF3IP1-203ENST00000409739 C20orf144Q9BQM9 153 aa22.31■■□□□ 1.16
TRAF3IP1-203ENST00000409739 J3KRW8 73 aa22.3■■□□□ 1.16
TRAF3IP1-203ENST00000409739 Q6ZNX1 250 aa22.3■■□□□ 1.16
TRAF3IP1-203ENST00000409739 VGLL1Q99990 258 aa22.3■■□□□ 1.16
TRAF3IP1-203ENST00000409739 YTHDF2Q9Y5A9 579 aaKnown RBP22.3■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms