RNA–Protein interactions for RNA: ENST00000409455.5

LIMS2-205, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-205ENST00000409455 ADORA2A-AS1P86434 159 aa12.21□□□□□ -0.45
LIMS2-205ENST00000409455 PVRIGQ6DKI7 326 aa12.21□□□□□ -0.45
LIMS2-205ENST00000409455 PSG8Q9UQ74 426 aa12.21□□□□□ -0.45
LIMS2-205ENST00000409455 U3KQK5 164 aa12.21□□□□□ -0.45
LIMS2-205ENST00000409455 APELAP0DMC3 54 aa12.2□□□□□ -0.46
LIMS2-205ENST00000409455 GCSHP23434 173 aa12.2□□□□□ -0.46
LIMS2-205ENST00000409455 FXYD7P58549 80 aa12.2□□□□□ -0.46
LIMS2-205ENST00000409455 FAM104BQ5XKR9 115 aa12.2□□□□□ -0.46
LIMS2-205ENST00000409455 AMN1Q8IY45 258 aa12.2□□□□□ -0.46
LIMS2-205ENST00000409455 LINC01560Q8TB33 94 aa12.2□□□□□ -0.46
LIMS2-205ENST00000409455 TEX36Q5VZQ5 186 aa12.2□□□□□ -0.46
LIMS2-205ENST00000409455 NGBQ9NPG2 151 aa12.2□□□□□ -0.46
LIMS2-205ENST00000409455 NDUFS8O00217 210 aa12.19□□□□□ -0.46
LIMS2-205ENST00000409455 PLXNB1O43157 2135 aa12.19□□□□□ -0.46
LIMS2-205ENST00000409455 RPL27AP46776 148 aaKnown RBP12.19□□□□□ -0.46
LIMS2-205ENST00000409455 PSG3Q16557 428 aa12.19□□□□□ -0.46
LIMS2-205ENST00000409455 SIGMAR1Q99720 223 aa12.19□□□□□ -0.46
LIMS2-205ENST00000409455 ASCL2Q99929 193 aa12.19□□□□□ -0.46
LIMS2-205ENST00000409455 ENSAO43768 121 aaKnown RBP12.19□□□□□ -0.46
LIMS2-205ENST00000409455 AZU1P20160 251 aa12.19□□□□□ -0.46
LIMS2-205ENST00000409455 FCGR2BP31994 310 aaPredicted RBP12.19□□□□□ -0.46
LIMS2-205ENST00000409455 MC5RP33032 325 aa12.19□□□□□ -0.46
LIMS2-205ENST00000409455 TRBV19A0A075B6N1 114 aa12.18□□□□□ -0.46
LIMS2-205ENST00000409455 TMEM189A5PLL7 270 aa12.18□□□□□ -0.46
LIMS2-205ENST00000409455 FBXL19-AS1Q494R0 122 aa12.18□□□□□ -0.46
LIMS2-205ENST00000409455 PSMG4Q5JS54 123 aa12.18□□□□□ -0.46
LIMS2-205ENST00000409455 LYZL1Q6UWQ5 148 aa12.18□□□□□ -0.46
LIMS2-205ENST00000409455 BCL6BQ8N143 479 aaPredicted RBP12.18□□□□□ -0.46
LIMS2-205ENST00000409455 RNASE6Q93091 150 aaKnown RBP12.18□□□□□ -0.46
LIMS2-205ENST00000409455 GTSF1LQ9H1H1 148 aa12.18□□□□□ -0.46
LIMS2-205ENST00000409455 TMEM213A2RRL7 107 aa12.18□□□□□ -0.46
LIMS2-205ENST00000409455 SHISA9B4DS77 424 aa12.18□□□□□ -0.46
LIMS2-205ENST00000409455 GOSR1O95249 250 aa12.18□□□□□ -0.46
LIMS2-205ENST00000409455 CRIP1P50238 77 aa12.18□□□□□ -0.46
LIMS2-205ENST00000409455 RITA1Q96K30 269 aa12.18□□□□□ -0.46
LIMS2-205ENST00000409455 RASL11BQ9BPW5 248 aa12.18□□□□□ -0.46
LIMS2-205ENST00000409455 PKDREJQ9NTG1 2253 aa12.18□□□□□ -0.46
LIMS2-205ENST00000409455 NDUFS7O75251 213 aa12.17□□□□□ -0.46
LIMS2-205ENST00000409455 CCL8P80075 99 aa12.17□□□□□ -0.46
LIMS2-205ENST00000409455 PAX8Q06710 450 aa12.17□□□□□ -0.46
LIMS2-205ENST00000409455 MRGPRG-AS1Q2M3A8 158 aa12.17□□□□□ -0.46
LIMS2-205ENST00000409455 TMEM200BQ69YZ2 307 aa12.17□□□□□ -0.46
LIMS2-205ENST00000409455 VGLL1Q99990 258 aa12.17□□□□□ -0.46
LIMS2-205ENST00000409455 DKK2Q9UBU2 259 aa12.17□□□□□ -0.46
LIMS2-205ENST00000409455 J3QR89 54 aa12.17□□□□□ -0.46
LIMS2-205ENST00000409455 FXYD2P54710 66 aa12.17□□□□□ -0.46
LIMS2-205ENST00000409455 SMAGPQ0VAQ4 97 aa12.17□□□□□ -0.46
LIMS2-205ENST00000409455 MRPL51Q4U2R6 128 aaKnown RBP12.17□□□□□ -0.46
LIMS2-205ENST00000409455 HIGD1BQ9P298 99 aa12.17□□□□□ -0.46
LIMS2-205ENST00000409455 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.16□□□□□ -0.46
LIMS2-205ENST00000409455 E7EQL1 145 aa12.16□□□□□ -0.46
LIMS2-205ENST00000409455 CKS2P33552 79 aa12.16□□□□□ -0.46
LIMS2-205ENST00000409455 LYPD1Q8N2G4 141 aa12.16□□□□□ -0.46
LIMS2-205ENST00000409455 LINC00311Q8N616 119 aa12.16□□□□□ -0.46
LIMS2-205ENST00000409455 PIFOQ8TCI5 191 aa12.16□□□□□ -0.46
LIMS2-205ENST00000409455 ACACBO00763 2458 aa12.16□□□□□ -0.46
LIMS2-205ENST00000409455 TMSB15BA0A087X1C1 80 aa12.16□□□□□ -0.46
LIMS2-205ENST00000409455 A0A1B0GV72 72 aa12.16□□□□□ -0.46
LIMS2-205ENST00000409455 TMEM8BA6NDV4 472 aa12.16□□□□□ -0.46
LIMS2-205ENST00000409455 C17orf100A8MU93 164 aa12.16□□□□□ -0.46
LIMS2-205ENST00000409455 RBP4P02753 201 aa12.16□□□□□ -0.46
LIMS2-205ENST00000409455 SIGLEC15Q6ZMC9 328 aa12.16□□□□□ -0.46
LIMS2-205ENST00000409455 CHAC1Q9BUX1 264 aa12.16□□□□□ -0.46
LIMS2-205ENST00000409455 TMEM133Q9H2Q1 129 aa12.16□□□□□ -0.46
LIMS2-205ENST00000409455 IGHV3-72A0A0B4J1Y9 119 aa12.15□□□□□ -0.46
LIMS2-205ENST00000409455 FBLL1A6NHQ2 334 aaKnown RBP12.15□□□□□ -0.46
LIMS2-205ENST00000409455 WFDC3Q8IUB2 231 aa12.15□□□□□ -0.46
LIMS2-205ENST00000409455 C8orf31Q8N9H6 132 aa12.15□□□□□ -0.46
LIMS2-205ENST00000409455 C17orf77Q96MU5 243 aa12.15□□□□□ -0.46
LIMS2-205ENST00000409455 PRB4P10163 310 aaPredicted RBP12.15□□□□□ -0.46
LIMS2-205ENST00000409455 C8orf49Q96NF6 230 aa12.15□□□□□ -0.46
LIMS2-205ENST00000409455 VSTM5A8MXK1 200 aa12.14□□□□□ -0.47
LIMS2-205ENST00000409455 K7ERJ3 54 aa12.14□□□□□ -0.47
LIMS2-205ENST00000409455 NPYP01303 97 aa12.14□□□□□ -0.47
LIMS2-205ENST00000409455 CD300EQ496F6 205 aaPredicted RBP12.14□□□□□ -0.47
LIMS2-205ENST00000409455 C18orf15Q96N68 181 aa12.14□□□□□ -0.47
LIMS2-205ENST00000409455 SHANK2-AS3Q9BTD1 123 aa12.14□□□□□ -0.47
LIMS2-205ENST00000409455 ZNF207O43670 478 aaKnown RBP12.14□□□□□ -0.47
LIMS2-205ENST00000409455 CD3EP07766 207 aa12.14□□□□□ -0.47
LIMS2-205ENST00000409455 TSSC4Q9Y5U2 329 aaPredicted RBP12.14□□□□□ -0.47
LIMS2-205ENST00000409455 ANKHD1Q8IWZ3 2542 aaKnown RBP12.14□□□□□ -0.47
LIMS2-205ENST00000409455 WI2-2373I1.2A0A1W2PRP0 233 aa12.13□□□□□ -0.47
LIMS2-205ENST00000409455 GAGE12HA6NDE8 117 aa12.13□□□□□ -0.47
LIMS2-205ENST00000409455 F8W1H4 67 aa12.13□□□□□ -0.47
LIMS2-205ENST00000409455 NHP2Q9NX24 153 aaKnown RBP12.13□□□□□ -0.47
LIMS2-205ENST00000409455 SMKR1H3BMG3 65 aa12.13□□□□□ -0.47
LIMS2-205ENST00000409455 BMI1P35226 326 aa12.13□□□□□ -0.47
LIMS2-205ENST00000409455 SMPXQ9UHP9 88 aa12.13□□□□□ -0.47
LIMS2-205ENST00000409455 IGKV2D-26A0A0A0MRZ7 120 aa12.12□□□□□ -0.47
LIMS2-205ENST00000409455 H3BRN7 92 aa12.12□□□□□ -0.47
LIMS2-205ENST00000409455 M0R3E3 92 aa12.12□□□□□ -0.47
LIMS2-205ENST00000409455 SH2D1AO60880 128 aa12.12□□□□□ -0.47
LIMS2-205ENST00000409455 TWIST1Q15672 202 aa12.12□□□□□ -0.47
LIMS2-205ENST00000409455 ABCA1O95477 2261 aa12.12□□□□□ -0.47
LIMS2-205ENST00000409455 HIVEP3Q5T1R4 2406 aa12.12□□□□□ -0.47
LIMS2-205ENST00000409455 ABCA4P78363 2273 aa12.12□□□□□ -0.47
LIMS2-205ENST00000409455 PPIAL4EA0A075B759 164 aa12.12□□□□□ -0.47
LIMS2-205ENST00000409455 PPIAL4FP0DN26 164 aa12.12□□□□□ -0.47
LIMS2-205ENST00000409455 PLGLAQ15195 96 aa12.12□□□□□ -0.47
LIMS2-205ENST00000409455 PHLDA1Q8WV24 401 aaPredicted RBP12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms