RNA–Protein interactions for RNA: ENST00000409402.8

SPIRE1-202, Transcript of spire type actin nucleation factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPIRE1, Length 5,665 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIRE1-202ENST00000409402 MRPL27Q9P0M9 148 aaKnown RBP20.05■□□□□ 0.8
SPIRE1-202ENST00000409402 GRNP28799 593 aaKnown RBP20.05■□□□□ 0.8
SPIRE1-202ENST00000409402 PLXNA4Q9HCM2 1894 aa20.05■□□□□ 0.8
SPIRE1-202ENST00000409402 FAM120AOSQ5T036 256 aa20.05■□□□□ 0.8
SPIRE1-202ENST00000409402 NPC2P61916 151 aa20.04■□□□□ 0.8
SPIRE1-202ENST00000409402 FRMPD3Q5JV73 1810 aa20.04■□□□□ 0.8
SPIRE1-202ENST00000409402 C15orf65H3BRN8 121 aa20.04■□□□□ 0.8
SPIRE1-202ENST00000409402 PRB1P04280 392 aa20.04■□□□□ 0.8
SPIRE1-202ENST00000409402 PFN1P07737 140 aaKnown RBP20.04■□□□□ 0.8
SPIRE1-202ENST00000409402 CXCL1P09341 107 aa20.04■□□□□ 0.8
SPIRE1-202ENST00000409402 KLK9Q9UKQ9 250 aa20.04■□□□□ 0.8
SPIRE1-202ENST00000409402 KNCNA6PVL3 124 aa20.04■□□□□ 0.8
SPIRE1-202ENST00000409402 C8orf86Q6ZUL3 223 aa20.04■□□□□ 0.8
SPIRE1-202ENST00000409402 TRAV16A0A0A6YYK6 109 aaPredicted RBP20.04■□□□□ 0.8
SPIRE1-202ENST00000409402 ERG28Q9UKR5 140 aa20.04■□□□□ 0.8
SPIRE1-202ENST00000409402 ORAOV1Q8WV07 137 aa20.03■□□□□ 0.8
SPIRE1-202ENST00000409402 TMEM158Q8WZ71 300 aa20.03■□□□□ 0.8
SPIRE1-202ENST00000409402 ZNF524Q96C55 264 aa20.03■□□□□ 0.8
SPIRE1-202ENST00000409402 VPREB3Q9UKI3 123 aa20.03■□□□□ 0.8
SPIRE1-202ENST00000409402 A0A1B0GV90 55 aa20.03■□□□□ 0.8
SPIRE1-202ENST00000409402 GAGE12JA6NER3 117 aa20.03■□□□□ 0.8
SPIRE1-202ENST00000409402 AZU1P20160 251 aa20.03■□□□□ 0.8
SPIRE1-202ENST00000409402 GAGE1Q13065 139 aa20.03■□□□□ 0.8
SPIRE1-202ENST00000409402 GAGE4Q13068 117 aa20.03■□□□□ 0.8
SPIRE1-202ENST00000409402 GAGE5Q13069 117 aa20.03■□□□□ 0.8
SPIRE1-202ENST00000409402 GAGE13Q4V321 117 aa20.03■□□□□ 0.8
SPIRE1-202ENST00000409402 SSBP2P81877 361 aaPredicted RBP20.03■□□□□ 0.8
SPIRE1-202ENST00000409402 AMN1Q8IY45 258 aa20.02■□□□□ 0.8
SPIRE1-202ENST00000409402 KLF2Q9Y5W3 355 aaPredicted RBP20.02■□□□□ 0.8
SPIRE1-202ENST00000409402 GATD1Q8NB37 220 aa20.02■□□□□ 0.8
SPIRE1-202ENST00000409402 LY6G5BQ8NDX9 201 aa20.02■□□□□ 0.8
SPIRE1-202ENST00000409402 LRRK1Q38SD2 2015 aa20.02■□□□□ 0.8
SPIRE1-202ENST00000409402 TRBV19A0A075B6N1 114 aa20.02■□□□□ 0.8
SPIRE1-202ENST00000409402 IGHV1OR15-1A0A075B7D0 117 aa20.02■□□□□ 0.8
SPIRE1-202ENST00000409402 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP20.02■□□□□ 0.8
SPIRE1-202ENST00000409402 DEFB112Q30KQ8 113 aa20.02■□□□□ 0.8
SPIRE1-202ENST00000409402 HOXB4P17483 251 aaPredicted RBP20.02■□□□□ 0.79
SPIRE1-202ENST00000409402 PHF3Q92576 2039 aaKnown RBP20.02■□□□□ 0.79
SPIRE1-202ENST00000409402 IGHV2-70P01814 119 aa20.01■□□□□ 0.79
SPIRE1-202ENST00000409402 H3BUA1 57 aa20.01■□□□□ 0.79
SPIRE1-202ENST00000409402 HSD52Q0P140 79 aa20.01■□□□□ 0.79
SPIRE1-202ENST00000409402 FANCMQ8IYD8 2048 aa20.01■□□□□ 0.79
SPIRE1-202ENST00000409402 ROS1P08922 2347 aa20.01■□□□□ 0.79
SPIRE1-202ENST00000409402 SMKR1H3BMG3 65 aa20.01■□□□□ 0.79
SPIRE1-202ENST00000409402 NDUFS7O75251 213 aa20■□□□□ 0.79
SPIRE1-202ENST00000409402 TSSC4Q9Y5U2 329 aaPredicted RBP20■□□□□ 0.79
SPIRE1-202ENST00000409402 MYMXA0A1B0GTQ4 84 aa20■□□□□ 0.79
SPIRE1-202ENST00000409402 ATXN8Q156A1 80 aa20■□□□□ 0.79
SPIRE1-202ENST00000409402 ZMAT4Q9H898 229 aa20■□□□□ 0.79
SPIRE1-202ENST00000409402 MPDZO75970 2070 aa20■□□□□ 0.79
SPIRE1-202ENST00000409402 CDKN1BP46527 198 aa20■□□□□ 0.79
SPIRE1-202ENST00000409402 DMRTA1Q5VZB9 504 aa20■□□□□ 0.79
SPIRE1-202ENST00000409402 TPSG1Q9NRR2 321 aa20■□□□□ 0.79
SPIRE1-202ENST00000409402 TRBV25-1A0A075B6N4 114 aa20■□□□□ 0.79
SPIRE1-202ENST00000409402 LINC00479Q96M42 142 aa20■□□□□ 0.79
SPIRE1-202ENST00000409402 TRAV8-2A0A0B4J237 113 aa19.99■□□□□ 0.79
SPIRE1-202ENST00000409402 A8MWV9 139 aa19.99■□□□□ 0.79
SPIRE1-202ENST00000409402 MMP23AO75900 390 aa19.99■□□□□ 0.79
SPIRE1-202ENST00000409402 USF3Q68DE3 2245 aa19.99■□□□□ 0.79
SPIRE1-202ENST00000409402 C1orf147Q96MC9 270 aaPredicted RBP19.99■□□□□ 0.79
SPIRE1-202ENST00000409402 NLRC5Q86WI3 1866 aa19.99■□□□□ 0.79
SPIRE1-202ENST00000409402 F8WEM9 126 aa19.99■□□□□ 0.79
SPIRE1-202ENST00000409402 GAGE12BA1L429 117 aa19.99■□□□□ 0.79
SPIRE1-202ENST00000409402 GAGE7O76087 117 aa19.99■□□□□ 0.79
SPIRE1-202ENST00000409402 GAGE12FP0CL80 117 aa19.99■□□□□ 0.79
SPIRE1-202ENST00000409402 GAGE12GP0CL81 117 aa19.99■□□□□ 0.79
SPIRE1-202ENST00000409402 GAGE12IP0CL82 117 aa19.99■□□□□ 0.79
SPIRE1-202ENST00000409402 ZNF492Q9P255 531 aa19.99■□□□□ 0.79
SPIRE1-202ENST00000409402 ANAPC10Q9UM13 185 aa19.99■□□□□ 0.79
SPIRE1-202ENST00000409402 C8orf49Q96NF6 230 aa19.98■□□□□ 0.79
SPIRE1-202ENST00000409402 C22orf46C9J442 243 aa19.98■□□□□ 0.79
SPIRE1-202ENST00000409402 CDK2AP2O75956 126 aa19.98■□□□□ 0.79
SPIRE1-202ENST00000409402 RSPO1Q2MKA7 263 aaPredicted RBP19.98■□□□□ 0.79
SPIRE1-202ENST00000409402 TIMM21Q9BVV7 248 aa19.98■□□□□ 0.79
SPIRE1-202ENST00000409402 IGHV7-4-1A0A0J9YVY3 117 aa19.98■□□□□ 0.79
SPIRE1-202ENST00000409402 IGHV3-16A0A0C4DH30 117 aa19.97■□□□□ 0.79
SPIRE1-202ENST00000409402 H3BRN7 92 aa19.97■□□□□ 0.79
SPIRE1-202ENST00000409402 ZNF561-AS1K7EIQ3 104 aa19.97■□□□□ 0.79
SPIRE1-202ENST00000409402 PAX9P55771 341 aa19.97■□□□□ 0.79
SPIRE1-202ENST00000409402 DIAPH2-AS1Q14236 149 aa19.97■□□□□ 0.79
SPIRE1-202ENST00000409402 HIST1H2BLQ99880 126 aa19.97■□□□□ 0.79
SPIRE1-202ENST00000409402 GSN-AS1Q9NRJ2 163 aa19.97■□□□□ 0.79
SPIRE1-202ENST00000409402 IGHV4-59P01825 116 aa19.97■□□□□ 0.79
SPIRE1-202ENST00000409402 ZNF134P52741 427 aa19.97■□□□□ 0.79
SPIRE1-202ENST00000409402 WT1-ASQ06250 92 aa19.96■□□□□ 0.79
SPIRE1-202ENST00000409402 LEPROTO15243 131 aa19.96■□□□□ 0.79
SPIRE1-202ENST00000409402 PRIMA1Q86XR5 153 aa19.96■□□□□ 0.79
SPIRE1-202ENST00000409402 MTURNQ8N3F0 131 aa19.96■□□□□ 0.79
SPIRE1-202ENST00000409402 TNFRSF6BO95407 300 aa19.96■□□□□ 0.79
SPIRE1-202ENST00000409402 ZNF479Q96JC4 524 aa19.95■□□□□ 0.78
SPIRE1-202ENST00000409402 PLXNA2O75051 1894 aa19.94■□□□□ 0.78
SPIRE1-202ENST00000409402 C8orf31Q8N9H6 132 aa19.94■□□□□ 0.78
SPIRE1-202ENST00000409402 SPXQ9BT56 116 aa19.94■□□□□ 0.78
SPIRE1-202ENST00000409402 FNDC4Q9H6D8 234 aaPredicted RBP19.94■□□□□ 0.78
SPIRE1-202ENST00000409402 EREGO14944 169 aa19.94■□□□□ 0.78
SPIRE1-202ENST00000409402 TMEM14CQ9P0S9 112 aa19.94■□□□□ 0.78
SPIRE1-202ENST00000409402 TRAV12-2A0A075B6T6 113 aa19.93■□□□□ 0.78
SPIRE1-202ENST00000409402 PKDREJQ9NTG1 2253 aa19.93■□□□□ 0.78
SPIRE1-202ENST00000409402 TP53BP1Q12888 1972 aaPredicted RBP19.93■□□□□ 0.78
SPIRE1-202ENST00000409402 PTPRDP23468 1912 aa19.93■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms