RNA–Protein interactions for RNA: ENST00000409248.8

C4orf48-201, Transcript of chromosome 4 open reading frame 48, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene C4orf48, Length 433 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf48-201ENST00000409248 FGF8P55075 233 aaPredicted RBP15.32■□□□□ 0.04
C4orf48-201ENST00000409248 RNF182Q8N6D2 247 aa15.32■□□□□ 0.04
C4orf48-201ENST00000409248 SFT2D1Q8WV19 159 aa15.32■□□□□ 0.04
C4orf48-201ENST00000409248 MBD3L1Q8WWY6 194 aa15.32■□□□□ 0.04
C4orf48-201ENST00000409248 C20orf173Q96LM9 149 aa15.32■□□□□ 0.04
C4orf48-201ENST00000409248 AAMDCQ9H7C9 122 aa15.32■□□□□ 0.04
C4orf48-201ENST00000409248 PSG3Q16557 428 aa15.31■□□□□ 0.04
C4orf48-201ENST00000409248 Q6ZWC4 215 aa15.31■□□□□ 0.04
C4orf48-201ENST00000409248 STHQ8IWL8 128 aa15.31■□□□□ 0.04
C4orf48-201ENST00000409248 ZNF738Q8NE65 137 aa15.31■□□□□ 0.04
C4orf48-201ENST00000409248 TENM3Q9P273 2699 aa15.3■□□□□ 0.04
C4orf48-201ENST00000409248 ZNF705EA8MWA4 302 aaPredicted RBP15.3■□□□□ 0.04
C4orf48-201ENST00000409248 HLA-DMBP28068 263 aa15.3■□□□□ 0.04
C4orf48-201ENST00000409248 LYPD1Q8N2G4 141 aa15.3■□□□□ 0.04
C4orf48-201ENST00000409248 PRELID1Q9Y255 219 aa15.3■□□□□ 0.04
C4orf48-201ENST00000409248 TP53TG1Q9Y2A0 90 aa15.3■□□□□ 0.04
C4orf48-201ENST00000409248 TEX46H3BTG2 121 aa15.29■□□□□ 0.04
C4orf48-201ENST00000409248 RANP62826 216 aaKnown RBP15.29■□□□□ 0.04
C4orf48-201ENST00000409248 FOXI2Q6ZQN5 318 aa15.29■□□□□ 0.04
C4orf48-201ENST00000409248 SUN5Q8TC36 379 aa15.29■□□□□ 0.04
C4orf48-201ENST00000409248 MRPL53Q96EL3 112 aaKnown RBP15.29■□□□□ 0.04
C4orf48-201ENST00000409248 Q9H3A6 140 aa15.29■□□□□ 0.04
C4orf48-201ENST00000409248 HUWE1Q7Z6Z7 4374 aaKnown RBP15.28■□□□□ 0.04
C4orf48-201ENST00000409248 KNCNA6PVL3 124 aa15.28■□□□□ 0.04
C4orf48-201ENST00000409248 HBE1P02100 147 aa15.28■□□□□ 0.04
C4orf48-201ENST00000409248 ICAM4Q14773 271 aa15.28■□□□□ 0.04
C4orf48-201ENST00000409248 DEFB135Q30KP9 77 aa15.28■□□□□ 0.04
C4orf48-201ENST00000409248 ACTL10Q5JWF8 245 aa15.28■□□□□ 0.04
C4orf48-201ENST00000409248 EBLN2Q6P2I7 272 aa15.28■□□□□ 0.04
C4orf48-201ENST00000409248 EXOC3-AS1Q8N2X6 119 aa15.28■□□□□ 0.04
C4orf48-201ENST00000409248 RPUSD4Q96CM3 377 aaKnown RBP15.28■□□□□ 0.04
C4orf48-201ENST00000409248 CSTL1Q9H114 145 aa15.28■□□□□ 0.04
C4orf48-201ENST00000409248 TMPRSS5Q9H3S3 457 aa15.28■□□□□ 0.04
C4orf48-201ENST00000409248 OTORQ9NRC9 128 aa15.28■□□□□ 0.04
C4orf48-201ENST00000409248 A0A1B0GV50 99 aa15.27■□□□□ 0.04
C4orf48-201ENST00000409248 TEX261Q6UWH6 196 aa15.27■□□□□ 0.04
C4orf48-201ENST00000409248 SAV1Q9H4B6 383 aaPredicted RBP15.27■□□□□ 0.04
C4orf48-201ENST00000409248 TRAV1-1A0A0B4J248 108 aa15.26■□□□□ 0.03
C4orf48-201ENST00000409248 SPRY2O43597 315 aa15.26■□□□□ 0.03
C4orf48-201ENST00000409248 IFNA7P01567 189 aa15.26■□□□□ 0.03
C4orf48-201ENST00000409248 BLOC1S1P78537 153 aa15.26■□□□□ 0.03
C4orf48-201ENST00000409248 TRPT1Q86TN4 253 aaKnown RBP15.26■□□□□ 0.03
C4orf48-201ENST00000409248 OVOL2Q9BRP0 275 aa15.26■□□□□ 0.03
C4orf48-201ENST00000409248 EDA2RQ9HAV5 297 aa15.26■□□□□ 0.03
C4orf48-201ENST00000409248 A0A1W2PRE2 83 aa15.25■□□□□ 0.03
C4orf48-201ENST00000409248 ZNF705FA8MVS1 300 aaPredicted RBP15.25■□□□□ 0.03
C4orf48-201ENST00000409248 M0R3E3 92 aa15.25■□□□□ 0.03
C4orf48-201ENST00000409248 CA1P00915 261 aaPredicted RBP15.25■□□□□ 0.03
C4orf48-201ENST00000409248 HLA-DRB4P13762 266 aa15.25■□□□□ 0.03
C4orf48-201ENST00000409248 CSN1S1P47710 185 aa15.25■□□□□ 0.03
C4orf48-201ENST00000409248 PPT1P50897 306 aa15.25■□□□□ 0.03
C4orf48-201ENST00000409248 DEFB1P60022 68 aa15.25■□□□□ 0.03
C4orf48-201ENST00000409248 MORN3Q6PF18 240 aaPredicted RBP15.25■□□□□ 0.03
C4orf48-201ENST00000409248 CMTM2Q8TAZ6 248 aa15.25■□□□□ 0.03
C4orf48-201ENST00000409248 HLA-DRB4X5D2U9 266 aa15.25■□□□□ 0.03
C4orf48-201ENST00000409248 NBEAL2Q6ZNJ1 2754 aa15.24■□□□□ 0.03
C4orf48-201ENST00000409248 A0A0J9YX75 114 aa15.24■□□□□ 0.03
C4orf48-201ENST00000409248 PGPA6NDG6 321 aa15.24■□□□□ 0.03
C4orf48-201ENST00000409248 F6UB75 175 aa15.24■□□□□ 0.03
C4orf48-201ENST00000409248 UBE2G2P60604 165 aa15.24■□□□□ 0.03
C4orf48-201ENST00000409248 ZNF680Q8NEM1 530 aa15.24■□□□□ 0.03
C4orf48-201ENST00000409248 MUC7Q8TAX7 377 aa15.24■□□□□ 0.03
C4orf48-201ENST00000409248 RXFP4Q8TDU9 374 aa15.24■□□□□ 0.03
C4orf48-201ENST00000409248 RNF183Q96D59 192 aa15.24■□□□□ 0.03
C4orf48-201ENST00000409248 H3BMM0 161 aa15.23■□□□□ 0.03
C4orf48-201ENST00000409248 DUSP14O95147 198 aaKnown RBP15.23■□□□□ 0.03
C4orf48-201ENST00000409248 HIST1H1AQ02539 215 aaPredicted RBP15.23■□□□□ 0.03
C4orf48-201ENST00000409248 GDF5OSQ5U4N7 250 aa15.23■□□□□ 0.03
C4orf48-201ENST00000409248 OR8A1Q8NGG7 326 aa15.23■□□□□ 0.03
C4orf48-201ENST00000409248 OR10J6PQ8NGY7 276 aa15.23■□□□□ 0.03
C4orf48-201ENST00000409248 ARL2-SNX15V9GYD0 113 aa15.23■□□□□ 0.03
C4orf48-201ENST00000409248 C3orf84H3BNL1 204 aa15.22■□□□□ 0.03
C4orf48-201ENST00000409248 OR4B1Q8NGF8 309 aa15.22■□□□□ 0.03
C4orf48-201ENST00000409248 NKX6-2Q9C056 277 aaPredicted RBP15.22■□□□□ 0.03
C4orf48-201ENST00000409248 YTHDF2Q9Y5A9 579 aaKnown RBP15.22■□□□□ 0.03
C4orf48-201ENST00000409248 FAM74A7A6NL05 159 aa15.21■□□□□ 0.03
C4orf48-201ENST00000409248 PRAC2D3DTV9 90 aa15.21■□□□□ 0.03
C4orf48-201ENST00000409248 SLC25A5P05141 298 aaKnown RBP15.21■□□□□ 0.03
C4orf48-201ENST00000409248 AGRNO00468 2067 aa15.2■□□□□ 0.02
C4orf48-201ENST00000409248 GGTLC3B5MD39 225 aa15.2■□□□□ 0.02
C4orf48-201ENST00000409248 ZNF705DP0CH99 300 aaPredicted RBP15.2■□□□□ 0.02
C4orf48-201ENST00000409248 ZNF705BP0CI00 300 aaPredicted RBP15.2■□□□□ 0.02
C4orf48-201ENST00000409248 PRB4P10163 310 aaPredicted RBP15.2■□□□□ 0.02
C4orf48-201ENST00000409248 CNN1P51911 297 aaKnown RBP15.2■□□□□ 0.02
C4orf48-201ENST00000409248 NUTF2P61970 127 aaKnown RBP15.2■□□□□ 0.02
C4orf48-201ENST00000409248 SUMO1P63165 101 aaKnown RBP15.2■□□□□ 0.02
C4orf48-201ENST00000409248 ARL6IP6Q8N6S5 226 aa15.2■□□□□ 0.02
C4orf48-201ENST00000409248 C5orf17Q8NAS9 161 aa15.2■□□□□ 0.02
C4orf48-201ENST00000409248 MANBALQ9NQG1 85 aa15.2■□□□□ 0.02
C4orf48-201ENST00000409248 RPH3ALQ9UNE2 315 aa15.2■□□□□ 0.02
C4orf48-201ENST00000409248 PAGE4O60829 102 aa15.19■□□□□ 0.02
C4orf48-201ENST00000409248 IFNA1P01562 189 aa15.19■□□□□ 0.02
C4orf48-201ENST00000409248 IGKV3-20P01619 116 aa15.19■□□□□ 0.02
C4orf48-201ENST00000409248 CCL20P78556 96 aa15.19■□□□□ 0.02
C4orf48-201ENST00000409248 CST9LP1Q5W188 147 aa15.19■□□□□ 0.02
C4orf48-201ENST00000409248 CLUHP3Q96NS8 147 aa15.19■□□□□ 0.02
C4orf48-201ENST00000409248 GNG13Q9P2W3 67 aa15.19■□□□□ 0.02
C4orf48-201ENST00000409248 DIRC3C9JPN6 131 aa15.18■□□□□ 0.02
C4orf48-201ENST00000409248 IL17DQ8TAD2 202 aa15.18■□□□□ 0.02
C4orf48-201ENST00000409248 C1QTNF4Q9BXJ3 329 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 324.9 ms