RNA–Protein interactions for RNA: ENST00000409047.2

TUBA3D-202, Transcript of tubulin alpha 3d, humanhuman

TSL 2

Gene TUBA3D, Length 471 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA3D-202ENST00000409047 HOXB5P09067 269 aa8.85□□□□□ -0.99
TUBA3D-202ENST00000409047 IGLC2P0DOY2 106 aa8.85□□□□□ -0.99
TUBA3D-202ENST00000409047 POLR2GP62487 172 aaKnown RBP eCLIP8.85□□□□□ -0.99
TUBA3D-202ENST00000409047 SLC38A11Q08AI6 406 aa8.85□□□□□ -0.99
TUBA3D-202ENST00000409047 CCDC190Q86UF4 302 aa8.85□□□□□ -0.99
TUBA3D-202ENST00000409047 LRRC20Q8TCA0 184 aa8.85□□□□□ -0.99
TUBA3D-202ENST00000409047 TMEM37Q8WXS4 190 aa8.85□□□□□ -0.99
TUBA3D-202ENST00000409047 TRIM63Q969Q1 353 aa8.85□□□□□ -0.99
TUBA3D-202ENST00000409047 RABL2AQ9UBK7 228 aaPredicted RBP8.85□□□□□ -0.99
TUBA3D-202ENST00000409047 PIGBOS1A0A0B4J2F0 54 aa8.84□□□□□ -0.99
TUBA3D-202ENST00000409047 NPIPB6E9PJ23 425 aa8.84□□□□□ -0.99
TUBA3D-202ENST00000409047 ANXA7P20073 488 aaKnown RBP8.84□□□□□ -0.99
TUBA3D-202ENST00000409047 GCSHP23434 173 aa8.84□□□□□ -0.99
TUBA3D-202ENST00000409047 VAMP1P23763 118 aa8.84□□□□□ -0.99
TUBA3D-202ENST00000409047 RRAS2P62070 204 aaPredicted RBP8.84□□□□□ -0.99
TUBA3D-202ENST00000409047 LYPD5Q6UWN5 251 aa8.84□□□□□ -0.99
TUBA3D-202ENST00000409047 TMEM14EPQ6UXP3 125 aa8.84□□□□□ -0.99
TUBA3D-202ENST00000409047 LINC00305Q7Z4B0 112 aa8.84□□□□□ -0.99
TUBA3D-202ENST00000409047 DYNC2LI1Q8TCX1 351 aa8.84□□□□□ -0.99
TUBA3D-202ENST00000409047 FUT9Q9Y231 359 aa8.84□□□□□ -0.99
TUBA3D-202ENST00000409047 KLF12Q9Y4X4 402 aa8.84□□□□□ -0.99
TUBA3D-202ENST00000409047 TRGV2A0A075B6R0 118 aa8.83□□□□□ -1
TUBA3D-202ENST00000409047 FNDC10F2Z333 226 aa8.83□□□□□ -1
TUBA3D-202ENST00000409047 SPINK4O60575 86 aa8.83□□□□□ -1
TUBA3D-202ENST00000409047 IFNA5P01569 189 aa8.83□□□□□ -1
TUBA3D-202ENST00000409047 ARL16Q0P5N6 197 aa8.83□□□□□ -1
TUBA3D-202ENST00000409047 Q6ZSN1 163 aa8.83□□□□□ -1
TUBA3D-202ENST00000409047 NFE4Q86UQ8 179 aa8.83□□□□□ -1
TUBA3D-202ENST00000409047 FAM19A4Q96LR4 140 aa8.83□□□□□ -1
TUBA3D-202ENST00000409047 LINC00467Q9BRT7 94 aa8.83□□□□□ -1
TUBA3D-202ENST00000409047 PSENENQ9NZ42 101 aa8.83□□□□□ -1
TUBA3D-202ENST00000409047 TRGV1A0A0A0MS02 117 aa8.82□□□□□ -1
TUBA3D-202ENST00000409047 KLLNB2CW77 178 aa8.82□□□□□ -1
TUBA3D-202ENST00000409047 PAX4O43316 350 aa8.82□□□□□ -1
TUBA3D-202ENST00000409047 CRYBA4P53673 196 aa8.82□□□□□ -1
TUBA3D-202ENST00000409047 TCL1AP56279 114 aa8.82□□□□□ -1
TUBA3D-202ENST00000409047 CD300CQ08708 224 aa8.82□□□□□ -1
TUBA3D-202ENST00000409047 OPCMLQ14982 345 aa8.82□□□□□ -1
TUBA3D-202ENST00000409047 ANXA2RQ3ZCQ2 193 aa8.82□□□□□ -1
TUBA3D-202ENST00000409047 Q6ZQT7 251 aa8.82□□□□□ -1
TUBA3D-202ENST00000409047 ST6GAL2Q96JF0 529 aa8.82□□□□□ -1
TUBA3D-202ENST00000409047 SMIM8Q96KF7 97 aa8.82□□□□□ -1
TUBA3D-202ENST00000409047 NPVFQ9HCQ7 196 aa8.82□□□□□ -1
TUBA3D-202ENST00000409047 FAM30AQ9NZY2 134 aa8.82□□□□□ -1
TUBA3D-202ENST00000409047 CCDC59Q9P031 241 aaKnown RBP8.82□□□□□ -1
TUBA3D-202ENST00000409047 RSL24D1Q9UHA3 163 aaKnown RBP8.82□□□□□ -1
TUBA3D-202ENST00000409047 ICOSQ9Y6W8 199 aa8.82□□□□□ -1
TUBA3D-202ENST00000409047 C7orf71A4D174 169 aa8.81□□□□□ -1
TUBA3D-202ENST00000409047 LRCOL1A6NCL2 159 aa8.81□□□□□ -1
TUBA3D-202ENST00000409047 FAM229AH3BQW9 127 aa8.81□□□□□ -1
TUBA3D-202ENST00000409047 METTL15P1P0C7V9 234 aa8.81□□□□□ -1
TUBA3D-202ENST00000409047 TNFSF8P32971 234 aa8.81□□□□□ -1
TUBA3D-202ENST00000409047 LEPP41159 167 aa8.81□□□□□ -1
TUBA3D-202ENST00000409047 FHL2Q14192 279 aa8.81□□□□□ -1
TUBA3D-202ENST00000409047 PXDC1Q5TGL8 231 aa8.81□□□□□ -1
TUBA3D-202ENST00000409047 BPIFA4PQ86YQ2 179 aa8.81□□□□□ -1
TUBA3D-202ENST00000409047 WFDC10BQ8IUB3 73 aa8.81□□□□□ -1
TUBA3D-202ENST00000409047 ZNF680Q8NEM1 530 aa8.81□□□□□ -1
TUBA3D-202ENST00000409047 SLIRPQ9GZT3 109 aaKnown RBP8.81□□□□□ -1
TUBA3D-202ENST00000409047 TP53TG3Q9ULZ0 132 aa8.81□□□□□ -1
TUBA3D-202ENST00000409047 PXMP4Q9Y6I8 212 aa8.81□□□□□ -1
TUBA3D-202ENST00000409047 AGPAT2O15120 278 aa8.8□□□□□ -1
TUBA3D-202ENST00000409047 SSSCA1O60232 199 aa8.8□□□□□ -1
TUBA3D-202ENST00000409047 IGHV3-53P01767 116 aa8.8□□□□□ -1
TUBA3D-202ENST00000409047 SLC25A5P05141 298 aaKnown RBP8.8□□□□□ -1
TUBA3D-202ENST00000409047 ERCC8Q13216 396 aa8.8□□□□□ -1
TUBA3D-202ENST00000409047 BTN1A1Q13410 526 aa8.8□□□□□ -1
TUBA3D-202ENST00000409047 MGST2Q99735 147 aa8.8□□□□□ -1
TUBA3D-202ENST00000409047 TMEM70Q9BUB7 260 aa8.8□□□□□ -1
TUBA3D-202ENST00000409047 MSRB1Q9NZV6 116 aa8.8□□□□□ -1
TUBA3D-202ENST00000409047 PRO0255Q9UI72 69 aa8.8□□□□□ -1
TUBA3D-202ENST00000409047 TRAV5A0A0B4J249 113 aa8.79□□□□□ -1
TUBA3D-202ENST00000409047 FABP12A6NFH5 140 aa8.79□□□□□ -1
TUBA3D-202ENST00000409047 J3QL48 77 aa8.79□□□□□ -1
TUBA3D-202ENST00000409047 M0R3E3 92 aa8.79□□□□□ -1
TUBA3D-202ENST00000409047 PRAF2O60831 178 aa8.79□□□□□ -1
TUBA3D-202ENST00000409047 PRR9Q5T870 116 aa8.79□□□□□ -1
TUBA3D-202ENST00000409047 S100A7AQ86SG5 101 aa8.79□□□□□ -1
TUBA3D-202ENST00000409047 ZNF546Q86UE3 836 aa8.79□□□□□ -1
TUBA3D-202ENST00000409047 EIF4E3Q8N5X7 224 aaKnown RBP8.79□□□□□ -1
TUBA3D-202ENST00000409047 VGLL1Q99990 258 aa8.79□□□□□ -1
TUBA3D-202ENST00000409047 SLC25A21Q9BQT8 299 aaPredicted RBP8.79□□□□□ -1
TUBA3D-202ENST00000409047 RNF24Q9Y225 148 aa8.79□□□□□ -1
TUBA3D-202ENST00000409047 LY96Q9Y6Y9 160 aa8.79□□□□□ -1
TUBA3D-202ENST00000409047 C9orf170A2RU37 121 aa8.78□□□□□ -1
TUBA3D-202ENST00000409047 KRTAP29-1A8MX34 341 aaPredicted RBP8.78□□□□□ -1
TUBA3D-202ENST00000409047 GOSR2O14653 212 aa8.78□□□□□ -1
TUBA3D-202ENST00000409047 IBA57Q5T440 356 aaKnown RBP8.78□□□□□ -1
TUBA3D-202ENST00000409047 NEGR1Q7Z3B1 354 aa8.78□□□□□ -1
TUBA3D-202ENST00000409047 OR10P1Q8NGE3 313 aa8.78□□□□□ -1
TUBA3D-202ENST00000409047 C8orf49Q96NF6 230 aa8.78□□□□□ -1
TUBA3D-202ENST00000409047 AGPAT4-IT1Q9H0P7 198 aa8.78□□□□□ -1
TUBA3D-202ENST00000409047 MRPL16Q9NX20 251 aaKnown RBP8.78□□□□□ -1
TUBA3D-202ENST00000409047 HHLA3Q9XRX5 114 aa8.78□□□□□ -1
TUBA3D-202ENST00000409047 RCL1Q9Y2P8 373 aaKnown RBP8.78□□□□□ -1
TUBA3D-202ENST00000409047 K7EQD1 137 aa8.77□□□□□ -1.01
TUBA3D-202ENST00000409047 COX7A2P2O60397 106 aa8.77□□□□□ -1.01
TUBA3D-202ENST00000409047 ZNF253O75346 499 aa8.77□□□□□ -1.01
TUBA3D-202ENST00000409047 NDUFB4O95168 129 aa8.77□□□□□ -1.01
TUBA3D-202ENST00000409047 OR4E1P0C645 316 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms