RNA–Protein interactions for RNA: ENST00000409031.5

SMPD4-202, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD4, Length 4,896 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-202ENST00000409031 BOD1L2Q8IYS8 172 aa14.23□□□□□ -0.13
SMPD4-202ENST00000409031 SPAG8Q99932 426 aaPredicted RBP14.23□□□□□ -0.13
SMPD4-202ENST00000409031 SPAARA0A1B0GVQ0 90 aa14.23□□□□□ -0.13
SMPD4-202ENST00000409031 POU2AF1Q16633 256 aa14.23□□□□□ -0.13
SMPD4-202ENST00000409031 GAFA1Q96PS6 74 aa14.23□□□□□ -0.13
SMPD4-202ENST00000409031 FOXI2Q6ZQN5 318 aa14.23□□□□□ -0.13
SMPD4-202ENST00000409031 SH2D6Q7Z4S9 175 aa14.23□□□□□ -0.13
SMPD4-202ENST00000409031 PRO1854Q9UHT4 67 aa14.23□□□□□ -0.13
SMPD4-202ENST00000409031 CCL21O00585 134 aa14.23□□□□□ -0.13
SMPD4-202ENST00000409031 LTAP01374 205 aa14.23□□□□□ -0.13
SMPD4-202ENST00000409031 ANKRD39Q53RE8 183 aa14.23□□□□□ -0.13
SMPD4-202ENST00000409031 C2orf66Q6UXQ4 117 aa14.23□□□□□ -0.13
SMPD4-202ENST00000409031 C14orf178Q8N769 122 aaPredicted RBP14.22□□□□□ -0.13
SMPD4-202ENST00000409031 CREBBPQ92793 2442 aa14.22□□□□□ -0.13
SMPD4-202ENST00000409031 TRAV8-3A0A0A6YYJ7 113 aa14.22□□□□□ -0.13
SMPD4-202ENST00000409031 GLMPQ8WWB7 406 aa14.22□□□□□ -0.13
SMPD4-202ENST00000409031 PRADC1Q9BSG0 188 aa14.22□□□□□ -0.13
SMPD4-202ENST00000409031 IGLL5B9A064 214 aa14.21□□□□□ -0.13
SMPD4-202ENST00000409031 SLC25A20O43772 301 aa14.21□□□□□ -0.13
SMPD4-202ENST00000409031 LINC00173Q6ZV60 143 aa14.21□□□□□ -0.13
SMPD4-202ENST00000409031 ABHD17AQ96GS6 310 aa14.21□□□□□ -0.13
SMPD4-202ENST00000409031 IGKV3OR2-268A0A0C4DH90 116 aa14.21□□□□□ -0.13
SMPD4-202ENST00000409031 C9orf139Q6ZV77 190 aa14.21□□□□□ -0.13
SMPD4-202ENST00000409031 LINC00477Q96M19 166 aa14.21□□□□□ -0.13
SMPD4-202ENST00000409031 PRDM6Q9NQX0 595 aa14.21□□□□□ -0.13
SMPD4-202ENST00000409031 TOMM7Q9P0U1 55 aa14.21□□□□□ -0.13
SMPD4-202ENST00000409031 SIGLEC15Q6ZMC9 328 aa14.21□□□□□ -0.13
SMPD4-202ENST00000409031 SHISA9B4DS77 424 aa14.21□□□□□ -0.14
SMPD4-202ENST00000409031 C15orf65H3BRN8 121 aa14.21□□□□□ -0.14
SMPD4-202ENST00000409031 HLA-DRB4P13762 266 aa14.21□□□□□ -0.14
SMPD4-202ENST00000409031 HLA-DRB4X5D2U9 266 aa14.21□□□□□ -0.14
SMPD4-202ENST00000409031 WDR86Q86TI4 376 aa14.2□□□□□ -0.14
SMPD4-202ENST00000409031 WFDC12Q8WWY7 111 aa14.2□□□□□ -0.14
SMPD4-202ENST00000409031 TRBV25-1A0A075B6N4 114 aa14.2□□□□□ -0.14
SMPD4-202ENST00000409031 SS18L2Q9UHA2 77 aa14.2□□□□□ -0.14
SMPD4-202ENST00000409031 IGHV3OR16-12A0A075B7B8 117 aa14.2□□□□□ -0.14
SMPD4-202ENST00000409031 THAP8Q8NA92 274 aa14.2□□□□□ -0.14
SMPD4-202ENST00000409031 NTN3O00634 580 aaPredicted RBP14.2□□□□□ -0.14
SMPD4-202ENST00000409031 ASPHD1Q5U4P2 390 aa14.2□□□□□ -0.14
SMPD4-202ENST00000409031 ZC2HC1AQ96GY0 325 aa14.2□□□□□ -0.14
SMPD4-202ENST00000409031 ZNF883P0CG24 379 aa14.19□□□□□ -0.14
SMPD4-202ENST00000409031 C8orf49Q96NF6 230 aa14.19□□□□□ -0.14
SMPD4-202ENST00000409031 DUX5Q96PT3 197 aa14.19□□□□□ -0.14
SMPD4-202ENST00000409031 CACNA1HO95180 2353 aa14.19□□□□□ -0.14
SMPD4-202ENST00000409031 PRB3Q04118 309 aaPredicted RBP14.19□□□□□ -0.14
SMPD4-202ENST00000409031 S100A7L2Q5SY68 101 aa14.19□□□□□ -0.14
SMPD4-202ENST00000409031 PRR25Q96S07 402 aa14.19□□□□□ -0.14
SMPD4-202ENST00000409031 FNDC1Q4ZHG4 1894 aaPredicted RBP14.19□□□□□ -0.14
SMPD4-202ENST00000409031 IGKV3D-20A0A0C4DH25 116 aa14.19□□□□□ -0.14
SMPD4-202ENST00000409031 HLA-DMBP28068 263 aa14.19□□□□□ -0.14
SMPD4-202ENST00000409031 PKDREJQ9NTG1 2253 aa14.19□□□□□ -0.14
SMPD4-202ENST00000409031 CNOT1A5YKK6 2376 aaKnown RBP14.19□□□□□ -0.14
SMPD4-202ENST00000409031 FGF6P10767 208 aa14.18□□□□□ -0.14
SMPD4-202ENST00000409031 FCN3O75636 299 aa14.18□□□□□ -0.14
SMPD4-202ENST00000409031 PAX8Q06710 450 aa14.18□□□□□ -0.14
SMPD4-202ENST00000409031 C15orf32Q32M92 178 aa14.18□□□□□ -0.14
SMPD4-202ENST00000409031 DUX3Q96PT4 197 aa14.18□□□□□ -0.14
SMPD4-202ENST00000409031 HIGD1BQ9P298 99 aa14.18□□□□□ -0.14
SMPD4-202ENST00000409031 LTBRP36941 435 aa14.18□□□□□ -0.14
SMPD4-202ENST00000409031 WT1-ASQ06250 92 aa14.18□□□□□ -0.14
SMPD4-202ENST00000409031 A0A087WX48 190 aa14.17□□□□□ -0.14
SMPD4-202ENST00000409031 A0A0U1RRA0 63 aa14.17□□□□□ -0.14
SMPD4-202ENST00000409031 Q0VFX4 171 aa14.17□□□□□ -0.14
SMPD4-202ENST00000409031 WFDC2Q14508 124 aa14.17□□□□□ -0.14
SMPD4-202ENST00000409031 ZNF876PQ49A33 203 aa14.17□□□□□ -0.14
SMPD4-202ENST00000409031 GHRHP01286 108 aa14.17□□□□□ -0.14
SMPD4-202ENST00000409031 LY6EQ16553 131 aa14.17□□□□□ -0.14
SMPD4-202ENST00000409031 FAM57AQ8TBR7 257 aa14.17□□□□□ -0.14
SMPD4-202ENST00000409031 RNASE6Q93091 150 aaKnown RBP14.17□□□□□ -0.14
SMPD4-202ENST00000409031 TIMM21Q9BVV7 248 aa14.17□□□□□ -0.14
SMPD4-202ENST00000409031 SPANXCQ9NY87 97 aa14.17□□□□□ -0.14
SMPD4-202ENST00000409031 CACNA1GO43497 2377 aa14.17□□□□□ -0.14
SMPD4-202ENST00000409031 K7EM74 188 aa14.17□□□□□ -0.14
SMPD4-202ENST00000409031 TCF15Q12870 199 aa14.17□□□□□ -0.14
SMPD4-202ENST00000409031 PMVKQ15126 192 aa14.17□□□□□ -0.14
SMPD4-202ENST00000409031 ZNF407Q9C0G0 2248 aa14.17□□□□□ -0.14
SMPD4-202ENST00000409031 TMEM178BH3BS89 294 aa14.16□□□□□ -0.14
SMPD4-202ENST00000409031 DUSP14O95147 198 aaKnown RBP14.16□□□□□ -0.14
SMPD4-202ENST00000409031 INAFM2P0DMQ5 153 aa14.16□□□□□ -0.14
SMPD4-202ENST00000409031 FOXC1Q12948 553 aa14.16□□□□□ -0.14
SMPD4-202ENST00000409031 C5orf64Q2M2E5 130 aa14.16□□□□□ -0.14
SMPD4-202ENST00000409031 TMEM141Q96I45 108 aa14.16□□□□□ -0.14
SMPD4-202ENST00000409031 OVOL2Q9BRP0 275 aa14.16□□□□□ -0.14
SMPD4-202ENST00000409031 C9orf172C9J069 976 aa14.16□□□□□ -0.14
SMPD4-202ENST00000409031 FAM120AOSQ5T036 256 aa14.16□□□□□ -0.14
SMPD4-202ENST00000409031 IGFL4Q6B9Z1 124 aa14.16□□□□□ -0.14
SMPD4-202ENST00000409031 ZNF474Q6S9Z5 364 aaPredicted RBP14.16□□□□□ -0.14
SMPD4-202ENST00000409031 IGF2BP2-AS1Q96M15 143 aa14.16□□□□□ -0.14
SMPD4-202ENST00000409031 NEU4Q8WWR8 484 aaPredicted RBP14.16□□□□□ -0.14
SMPD4-202ENST00000409031 C11orf68Q9H3H3 251 aaKnown RBP14.16□□□□□ -0.14
SMPD4-202ENST00000409031 TRGV11A0A075B6L2 103 aa14.16□□□□□ -0.14
SMPD4-202ENST00000409031 C2orf70A6NJV1 201 aa14.16□□□□□ -0.14
SMPD4-202ENST00000409031 NDUFB8O95169 186 aa14.16□□□□□ -0.14
SMPD4-202ENST00000409031 DOCK10Q96BY6 2186 aa14.15□□□□□ -0.14
SMPD4-202ENST00000409031 TRAV26-1A0A087WT03 109 aa14.15□□□□□ -0.14
SMPD4-202ENST00000409031 NPC2P61916 151 aa14.15□□□□□ -0.14
SMPD4-202ENST00000409031 C8orf86Q6ZUL3 223 aa14.15□□□□□ -0.14
SMPD4-202ENST00000409031 PLCE1Q9P212 2302 aa14.15□□□□□ -0.14
SMPD4-202ENST00000409031 FRMD6-AS1P0C7T7 363 aa14.15□□□□□ -0.14
SMPD4-202ENST00000409031 HIST1H4AP62805 103 aaKnown RBP14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 97.7 ms