RNA–Protein interactions for RNA: ENST00000405578.8

RPAIN-204, Transcript of RPA interacting protein, humanhuman

TSL 2 BASIC

Gene RPAIN, Length 1,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-204ENST00000405578 SNRPCP09234 159 aaKnown RBP7.81□□□□□ -1.16
RPAIN-204ENST00000405578 FRMD6-AS1P0C7T7 363 aa7.81□□□□□ -1.16
RPAIN-204ENST00000405578 STAG3L2P0CL84 134 aa7.81□□□□□ -1.16
RPAIN-204ENST00000405578 STAG3L3P0CL85 134 aa7.81□□□□□ -1.16
RPAIN-204ENST00000405578 ARL14EPLP0DKL9 152 aa7.81□□□□□ -1.16
RPAIN-204ENST00000405578 APOC4P55056 127 aa7.81□□□□□ -1.16
RPAIN-204ENST00000405578 NUTF2P61970 127 aaKnown RBP7.81□□□□□ -1.16
RPAIN-204ENST00000405578 PSG3Q16557 428 aa7.81□□□□□ -1.16
RPAIN-204ENST00000405578 ACTL10Q5JWF8 245 aa7.81□□□□□ -1.16
RPAIN-204ENST00000405578 FAM74A1Q5RGS3 127 aa7.81□□□□□ -1.16
RPAIN-204ENST00000405578 FOXI2Q6ZQN5 318 aa7.81□□□□□ -1.16
RPAIN-204ENST00000405578 LYPD1Q8N2G4 141 aa7.81□□□□□ -1.16
RPAIN-204ENST00000405578 FAM213BQ8TBF2 198 aa7.81□□□□□ -1.16
RPAIN-204ENST00000405578 FXYD5Q96DB9 178 aa7.81□□□□□ -1.16
RPAIN-204ENST00000405578 PHYHIPLQ96FC7 376 aa7.81□□□□□ -1.16
RPAIN-204ENST00000405578 WFDC10AQ9H1F0 79 aa7.81□□□□□ -1.16
RPAIN-204ENST00000405578 EDA2RQ9HAV5 297 aa7.81□□□□□ -1.16
RPAIN-204ENST00000405578 ZNF586Q9NXT0 402 aa7.81□□□□□ -1.16
RPAIN-204ENST00000405578 PRELID1Q9Y255 219 aa7.81□□□□□ -1.16
RPAIN-204ENST00000405578 DUSP14O95147 198 aaKnown RBP7.8□□□□□ -1.16
RPAIN-204ENST00000405578 CSN1S1P47710 185 aa7.8□□□□□ -1.16
RPAIN-204ENST00000405578 MRPL53Q96EL3 112 aaKnown RBP7.8□□□□□ -1.16
RPAIN-204ENST00000405578 SAT2Q96F10 170 aaPredicted RBP7.8□□□□□ -1.16
RPAIN-204ENST00000405578 C17orf77Q96MU5 243 aa7.8□□□□□ -1.16
RPAIN-204ENST00000405578 TRAV8-2A0A0B4J237 113 aa7.79□□□□□ -1.16
RPAIN-204ENST00000405578 KIR2DL5BA0A0G2JN68 375 aa7.79□□□□□ -1.16
RPAIN-204ENST00000405578 KIR2DL5BA0A0G2JPC4 375 aa7.79□□□□□ -1.16
RPAIN-204ENST00000405578 MAP1LC3B2A6NCE7 125 aa7.79□□□□□ -1.16
RPAIN-204ENST00000405578 H2AFB1P0C5Y9 115 aa7.79□□□□□ -1.16
RPAIN-204ENST00000405578 GCHFRP30047 84 aa7.79□□□□□ -1.16
RPAIN-204ENST00000405578 RANP62826 216 aaKnown RBP7.79□□□□□ -1.16
RPAIN-204ENST00000405578 KIR2DL5AQ8N109 375 aa7.79□□□□□ -1.16
RPAIN-204ENST00000405578 RNF182Q8N6D2 247 aa7.79□□□□□ -1.16
RPAIN-204ENST00000405578 OR10J6PQ8NGY7 276 aa7.79□□□□□ -1.16
RPAIN-204ENST00000405578 KIR2DL5BQ8NHK3 375 aa7.79□□□□□ -1.16
RPAIN-204ENST00000405578 CMTM2Q8TAZ6 248 aa7.79□□□□□ -1.16
RPAIN-204ENST00000405578 RXFP4Q8TDU9 374 aa7.79□□□□□ -1.16
RPAIN-204ENST00000405578 SFT2D1Q8WV19 159 aa7.79□□□□□ -1.16
RPAIN-204ENST00000405578 RPUSD4Q96CM3 377 aaKnown RBP7.79□□□□□ -1.16
RPAIN-204ENST00000405578 MAP1LC3BQ9GZQ8 125 aa7.79□□□□□ -1.16
RPAIN-204ENST00000405578 SAV1Q9H4B6 383 aaPredicted RBP7.79□□□□□ -1.16
RPAIN-204ENST00000405578 PPP1R14DQ9NXH3 145 aa7.79□□□□□ -1.16
RPAIN-204ENST00000405578 KNCNA6PVL3 124 aa7.78□□□□□ -1.16
RPAIN-204ENST00000405578 SLC17A3O00476 420 aa7.78□□□□□ -1.16
RPAIN-204ENST00000405578 UBE2CO00762 179 aa7.78□□□□□ -1.16
RPAIN-204ENST00000405578 RGS13O14921 159 aa7.78□□□□□ -1.16
RPAIN-204ENST00000405578 EIF3GO75821 320 aaKnown RBP eCLIP7.78□□□□□ -1.16
RPAIN-204ENST00000405578 HLA-DRB4P13762 266 aa7.78□□□□□ -1.16
RPAIN-204ENST00000405578 RPL35AP18077 110 aaKnown RBP7.78□□□□□ -1.16
RPAIN-204ENST00000405578 ICAM4Q14773 271 aa7.78□□□□□ -1.16
RPAIN-204ENST00000405578 IGFL4Q6B9Z1 124 aa7.78□□□□□ -1.16
RPAIN-204ENST00000405578 MORN3Q6PF18 240 aaPredicted RBP7.78□□□□□ -1.16
RPAIN-204ENST00000405578 OR4B1Q8NGF8 309 aa7.78□□□□□ -1.16
RPAIN-204ENST00000405578 ZNF503Q96F45 646 aa7.78□□□□□ -1.16
RPAIN-204ENST00000405578 CSTL1Q9H114 145 aa7.78□□□□□ -1.16
RPAIN-204ENST00000405578 OTORQ9NRC9 128 aa7.78□□□□□ -1.16
RPAIN-204ENST00000405578 HLA-DRB4X5D2U9 266 aa7.78□□□□□ -1.16
RPAIN-204ENST00000405578 RYR1P21817 5038 aa7.77□□□□□ -1.16
RPAIN-204ENST00000405578 A0A0J9YX75 114 aa7.77□□□□□ -1.17
RPAIN-204ENST00000405578 H3BMM0 161 aa7.77□□□□□ -1.17
RPAIN-204ENST00000405578 NDUFB4O95168 129 aa7.77□□□□□ -1.17
RPAIN-204ENST00000405578 HBE1P02100 147 aa7.77□□□□□ -1.17
RPAIN-204ENST00000405578 FHITP49789 147 aa7.77□□□□□ -1.17
RPAIN-204ENST00000405578 SULT1A2P50226 295 aa7.77□□□□□ -1.17
RPAIN-204ENST00000405578 PPT1P50897 306 aa7.77□□□□□ -1.17
RPAIN-204ENST00000405578 HIST1H1AQ02539 215 aaPredicted RBP7.77□□□□□ -1.17
RPAIN-204ENST00000405578 ZNF726P1Q15940 193 aa7.77□□□□□ -1.17
RPAIN-204ENST00000405578 ZNF124Q15973 351 aa7.77□□□□□ -1.17
RPAIN-204ENST00000405578 TRPT1Q86TN4 253 aaKnown RBP7.77□□□□□ -1.17
RPAIN-204ENST00000405578 EXOC3-AS1Q8N2X6 119 aa7.77□□□□□ -1.17
RPAIN-204ENST00000405578 OR8A1Q8NGG7 326 aa7.77□□□□□ -1.17
RPAIN-204ENST00000405578 MBD3L1Q8WWY6 194 aa7.77□□□□□ -1.17
RPAIN-204ENST00000405578 C20orf173Q96LM9 149 aa7.77□□□□□ -1.17
RPAIN-204ENST00000405578 TM2D3Q9BRN9 247 aa7.77□□□□□ -1.17
RPAIN-204ENST00000405578 C1QTNF4Q9BXJ3 329 aa7.77□□□□□ -1.17
RPAIN-204ENST00000405578 NKX6-2Q9C056 277 aaPredicted RBP7.77□□□□□ -1.17
RPAIN-204ENST00000405578 Q9H3A6 140 aa7.77□□□□□ -1.17
RPAIN-204ENST00000405578 PGPA6NDG6 321 aa7.76□□□□□ -1.17
RPAIN-204ENST00000405578 ZNF705EA8MWA4 302 aaPredicted RBP7.76□□□□□ -1.17
RPAIN-204ENST00000405578 IGKV3-20P01619 116 aa7.76□□□□□ -1.17
RPAIN-204ENST00000405578 HLA-DMBP28068 263 aa7.76□□□□□ -1.17
RPAIN-204ENST00000405578 FGF8P55075 233 aaPredicted RBP7.76□□□□□ -1.17
RPAIN-204ENST00000405578 ARL6IP6Q8N6S5 226 aa7.76□□□□□ -1.17
RPAIN-204ENST00000405578 SUN5Q8TC36 379 aa7.76□□□□□ -1.17
RPAIN-204ENST00000405578 CLUHP3Q96NS8 147 aa7.76□□□□□ -1.17
RPAIN-204ENST00000405578 A0A1W2PRE2 83 aa7.75□□□□□ -1.17
RPAIN-204ENST00000405578 ZNF705FA8MVS1 300 aaPredicted RBP7.75□□□□□ -1.17
RPAIN-204ENST00000405578 F6UB75 175 aa7.75□□□□□ -1.17
RPAIN-204ENST00000405578 K7EQM0 130 aa7.75□□□□□ -1.17
RPAIN-204ENST00000405578 M0R3E3 92 aa7.75□□□□□ -1.17
RPAIN-204ENST00000405578 CA1P00915 261 aaPredicted RBP7.75□□□□□ -1.17
RPAIN-204ENST00000405578 AMBPP02760 352 aa7.75□□□□□ -1.17
RPAIN-204ENST00000405578 CNN1P51911 297 aaKnown RBP7.75□□□□□ -1.17
RPAIN-204ENST00000405578 BLOC1S1P78537 153 aa7.75□□□□□ -1.17
RPAIN-204ENST00000405578 HAGHQ16775 308 aa7.75□□□□□ -1.17
RPAIN-204ENST00000405578 ALKAL2Q6UX46 152 aa7.75□□□□□ -1.17
RPAIN-204ENST00000405578 LINC00322Q6ZN03 302 aaPredicted RBP7.75□□□□□ -1.17
RPAIN-204ENST00000405578 SSX7Q7RTT5 188 aa7.75□□□□□ -1.17
RPAIN-204ENST00000405578 SPATA25Q9BR10 227 aa7.75□□□□□ -1.17
RPAIN-204ENST00000405578 ARL2-SNX15V9GYD0 113 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 764.9 ms