RNA–Protein interactions for RNA: ENST00000404525.5

LTBP1-202, Transcript of latent transforming growth factor beta binding protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LTBP1, Length 5,092 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP1-202ENST00000404525 PAX8Q06710 450 aa6.54□□□□□ -1.36
LTBP1-202ENST00000404525 LAGE3Q14657 143 aa6.54□□□□□ -1.36
LTBP1-202ENST00000404525 SLC25A39Q9BZJ4 359 aaPredicted RBP6.54□□□□□ -1.36
LTBP1-202ENST00000404525 PRSS22Q9GZN4 317 aa6.54□□□□□ -1.36
LTBP1-202ENST00000404525 LRP4O75096 1905 aa6.54□□□□□ -1.36
LTBP1-202ENST00000404525 LINC00473A8K010 186 aa6.54□□□□□ -1.36
LTBP1-202ENST00000404525 C10orf55Q5SWW7 151 aa6.54□□□□□ -1.36
LTBP1-202ENST00000404525 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.54□□□□□ -1.36
LTBP1-202ENST00000404525 THBDP07204 575 aa6.54□□□□□ -1.36
LTBP1-202ENST00000404525 MORN3Q6PF18 240 aaPredicted RBP6.54□□□□□ -1.36
LTBP1-202ENST00000404525 NAA38Q9BRA0 125 aaKnown RBP6.54□□□□□ -1.36
LTBP1-202ENST00000404525 TGFAP01135 160 aa6.53□□□□□ -1.36
LTBP1-202ENST00000404525 KLF5Q13887 457 aaPredicted RBP6.53□□□□□ -1.36
LTBP1-202ENST00000404525 CD177Q8N6Q3 437 aa6.53□□□□□ -1.36
LTBP1-202ENST00000404525 EDA2RQ9HAV5 297 aa6.53□□□□□ -1.36
LTBP1-202ENST00000404525 ERG28Q9UKR5 140 aa6.53□□□□□ -1.36
LTBP1-202ENST00000404525 DOCK10Q96BY6 2186 aa6.53□□□□□ -1.36
LTBP1-202ENST00000404525 SLC25A20O43772 301 aa6.53□□□□□ -1.36
LTBP1-202ENST00000404525 KRTAP27-1Q3LI81 207 aa6.53□□□□□ -1.36
LTBP1-202ENST00000404525 MINOS1Q5TGZ0 78 aa6.53□□□□□ -1.36
LTBP1-202ENST00000404525 WIPF2Q8TF74 440 aaPredicted RBP6.53□□□□□ -1.36
LTBP1-202ENST00000404525 GLMPQ8WWB7 406 aa6.53□□□□□ -1.36
LTBP1-202ENST00000404525 MINOS1-NBL1R4GNA1 71 aa6.53□□□□□ -1.36
LTBP1-202ENST00000404525 KMT2EQ8IZD2 1858 aa6.53□□□□□ -1.36
LTBP1-202ENST00000404525 COL4A2P08572 1712 aa6.53□□□□□ -1.36
LTBP1-202ENST00000404525 C9orf118A6NHY6 69 aa6.53□□□□□ -1.36
LTBP1-202ENST00000404525 IGHV1-8P0DP01 117 aa6.53□□□□□ -1.36
LTBP1-202ENST00000404525 CD28P10747 220 aa6.53□□□□□ -1.36
LTBP1-202ENST00000404525 PPIFP30405 207 aaKnown RBP6.53□□□□□ -1.36
LTBP1-202ENST00000404525 LINC00205P59089 165 aa6.53□□□□□ -1.36
LTBP1-202ENST00000404525 C9orf139Q6ZV77 190 aa6.53□□□□□ -1.36
LTBP1-202ENST00000404525 BDP1A6H8Y1 2624 aa6.53□□□□□ -1.36
LTBP1-202ENST00000404525 TRAV2A0A0B4J234 112 aa6.53□□□□□ -1.36
LTBP1-202ENST00000404525 D6R8Y8 96 aa6.53□□□□□ -1.36
LTBP1-202ENST00000404525 K7EM74 188 aa6.53□□□□□ -1.36
LTBP1-202ENST00000404525 SPINK8P0C7L1 97 aa6.53□□□□□ -1.36
LTBP1-202ENST00000404525 ZNF415Q09FC8 603 aa6.53□□□□□ -1.36
LTBP1-202ENST00000404525 ATXN8Q156A1 80 aa6.53□□□□□ -1.36
LTBP1-202ENST00000404525 C3orf36Q3SXR2 165 aa6.53□□□□□ -1.36
LTBP1-202ENST00000404525 PLEKHB2Q96CS7 222 aa6.53□□□□□ -1.36
LTBP1-202ENST00000404525 IGLC1P0CG04 106 aa6.52□□□□□ -1.36
LTBP1-202ENST00000404525 ZNF138P52744 262 aa6.52□□□□□ -1.36
LTBP1-202ENST00000404525 BCL6BQ8N143 479 aaPredicted RBP6.52□□□□□ -1.36
LTBP1-202ENST00000404525 MCRIP2Q9BUT9 160 aaKnown RBP6.52□□□□□ -1.36
LTBP1-202ENST00000404525 ABCA4P78363 2273 aa6.52□□□□□ -1.37
LTBP1-202ENST00000404525 TRAV3A0A0B4J244 114 aa6.52□□□□□ -1.37
LTBP1-202ENST00000404525 J3QKU1 62 aa6.52□□□□□ -1.37
LTBP1-202ENST00000404525 K7EP34 96 aa6.52□□□□□ -1.37
LTBP1-202ENST00000404525 EVI2AP22794 236 aa6.52□□□□□ -1.37
LTBP1-202ENST00000404525 PRR31Q5SQ13 230 aa6.52□□□□□ -1.37
LTBP1-202ENST00000404525 C9orf153Q5TBE3 101 aa6.52□□□□□ -1.37
LTBP1-202ENST00000404525 TMEM200BQ69YZ2 307 aa6.52□□□□□ -1.37
LTBP1-202ENST00000404525 SIGLEC15Q6ZMC9 328 aa6.52□□□□□ -1.37
LTBP1-202ENST00000404525 FGF23Q9GZV9 251 aaPredicted RBP6.52□□□□□ -1.37
LTBP1-202ENST00000404525 FAM215AQ9Y5M1 114 aa6.52□□□□□ -1.37
LTBP1-202ENST00000404525 IGHV1-24A0A0C4DH33 117 aa6.52□□□□□ -1.37
LTBP1-202ENST00000404525 SMAD7O15105 426 aaKnown RBP6.52□□□□□ -1.37
LTBP1-202ENST00000404525 KIR3DS1Q14943 382 aa6.52□□□□□ -1.37
LTBP1-202ENST00000404525 CD300EQ496F6 205 aaPredicted RBP6.52□□□□□ -1.37
LTBP1-202ENST00000404525 KLF17Q5JT82 389 aaPredicted RBP6.52□□□□□ -1.37
LTBP1-202ENST00000404525 SFTA2Q6UW10 78 aa6.52□□□□□ -1.37
LTBP1-202ENST00000404525 TMEM86BQ8N661 226 aa6.52□□□□□ -1.37
LTBP1-202ENST00000404525 METRNQ9UJH8 293 aa6.52□□□□□ -1.37
LTBP1-202ENST00000404525 TRAV8-1A0A0A6YYK1 113 aa6.52□□□□□ -1.37
LTBP1-202ENST00000404525 GUSBP1Q15486 140 aa6.52□□□□□ -1.37
LTBP1-202ENST00000404525 LYZL1Q6UWQ5 148 aa6.52□□□□□ -1.37
LTBP1-202ENST00000404525 TRAV41A0A0B4J266 112 aa6.51□□□□□ -1.37
LTBP1-202ENST00000404525 IGHV1-3A0A0C4DH29 117 aa6.51□□□□□ -1.37
LTBP1-202ENST00000404525 TMEM178BH3BS89 294 aa6.51□□□□□ -1.37
LTBP1-202ENST00000404525 COX8AP10176 69 aa6.51□□□□□ -1.37
LTBP1-202ENST00000404525 ZNF672Q499Z4 452 aaPredicted RBP6.51□□□□□ -1.37
LTBP1-202ENST00000404525 STHQ8IWL8 128 aa6.51□□□□□ -1.37
LTBP1-202ENST00000404525 EXOC3-AS1Q8N2X6 119 aa6.51□□□□□ -1.37
LTBP1-202ENST00000404525 SRSF8Q9BRL6 282 aaKnown RBP6.51□□□□□ -1.37
LTBP1-202ENST00000404525 GGTLC3B5MD39 225 aa6.51□□□□□ -1.37
LTBP1-202ENST00000404525 G3V4G9 280 aa6.51□□□□□ -1.37
LTBP1-202ENST00000404525 DSCR9P59020 149 aa6.51□□□□□ -1.37
LTBP1-202ENST00000404525 C15orf32Q32M92 178 aa6.51□□□□□ -1.37
LTBP1-202ENST00000404525 FER1L5A0AVI2 2057 aa6.51□□□□□ -1.37
LTBP1-202ENST00000404525 COL5A1P20908 1838 aaPredicted RBP6.51□□□□□ -1.37
LTBP1-202ENST00000404525 C2orf70A6NJV1 201 aa6.51□□□□□ -1.37
LTBP1-202ENST00000404525 CMC4P56277 68 aaPredicted RBP6.51□□□□□ -1.37
LTBP1-202ENST00000404525 LINC00477Q96M19 166 aa6.51□□□□□ -1.37
LTBP1-202ENST00000404525 LINC00479Q96M42 142 aa6.51□□□□□ -1.37
LTBP1-202ENST00000404525 ATRXP46100 2492 aa6.51□□□□□ -1.37
LTBP1-202ENST00000404525 USF3Q68DE3 2245 aa6.51□□□□□ -1.37
LTBP1-202ENST00000404525 M0R2P5 195 aa6.51□□□□□ -1.37
LTBP1-202ENST00000404525 IGHV4-39P01824 125 aa6.51□□□□□ -1.37
LTBP1-202ENST00000404525 VDAC2P45880 294 aaPredicted RBP6.51□□□□□ -1.37
LTBP1-202ENST00000404525 C5orf64Q2M2E5 130 aa6.51□□□□□ -1.37
LTBP1-202ENST00000404525 FAM231DQ6ZW35 169 aa6.51□□□□□ -1.37
LTBP1-202ENST00000404525 GFRA4Q9GZZ7 299 aa6.51□□□□□ -1.37
LTBP1-202ENST00000404525 DPH3P1Q9H4G8 78 aa6.51□□□□□ -1.37
LTBP1-202ENST00000404525 SPANXCQ9NY87 97 aa6.51□□□□□ -1.37
LTBP1-202ENST00000404525 IGKV2-40A0A087WW87 121 aaPredicted RBP6.5□□□□□ -1.37
LTBP1-202ENST00000404525 VCYO14598 125 aa6.5□□□□□ -1.37
LTBP1-202ENST00000404525 IGKV2D-40P01614 121 aaPredicted RBP6.5□□□□□ -1.37
LTBP1-202ENST00000404525 PSG3Q16557 428 aa6.5□□□□□ -1.37
LTBP1-202ENST00000404525 HEATR1Q9H583 2144 aaKnown RBP6.5□□□□□ -1.37
LTBP1-202ENST00000404525 SCRT2Q9NQ03 307 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms