RNA–Protein interactions for RNA: ENST00000403136.1

CEACAM1-206, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, humanhuman

TSL 1 (best)

Gene CEACAM1, Length 1,778 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM1-206ENST00000403136 C8orf86Q6ZUL3 223 aa10.12□□□□□ -0.79
CEACAM1-206ENST00000403136 REC114Q7Z4M0 266 aa10.12□□□□□ -0.79
CEACAM1-206ENST00000403136 IMMP2LQ96T52 175 aa10.12□□□□□ -0.79
CEACAM1-206ENST00000403136 PSG8Q9UQ74 426 aa10.12□□□□□ -0.79
CEACAM1-206ENST00000403136 TRAV8-2A0A0B4J237 113 aa10.11□□□□□ -0.79
CEACAM1-206ENST00000403136 PRB4P10163 310 aaPredicted RBP10.11□□□□□ -0.79
CEACAM1-206ENST00000403136 HOXD3P31249 432 aaPredicted RBP10.11□□□□□ -0.79
CEACAM1-206ENST00000403136 FLI1Q01543 452 aaPredicted RBP10.11□□□□□ -0.79
CEACAM1-206ENST00000403136 PRNTQ86SH4 94 aa10.11□□□□□ -0.79
CEACAM1-206ENST00000403136 C4orf3Q8WVX3 66 aa10.11□□□□□ -0.79
CEACAM1-206ENST00000403136 WFDC12Q8WWY7 111 aa10.11□□□□□ -0.79
CEACAM1-206ENST00000403136 RNASE7Q9H1E1 156 aaKnown RBP10.11□□□□□ -0.79
CEACAM1-206ENST00000403136 TRBV24-1A0A075B6N3 115 aa10.11□□□□□ -0.79
CEACAM1-206ENST00000403136 TMEM213A2RRL7 107 aa10.11□□□□□ -0.79
CEACAM1-206ENST00000403136 ZNF705FA8MVS1 300 aaPredicted RBP10.11□□□□□ -0.79
CEACAM1-206ENST00000403136 SYNJ2BPP57105 145 aa10.11□□□□□ -0.79
CEACAM1-206ENST00000403136 FOXL1Q12952 345 aa10.11□□□□□ -0.79
CEACAM1-206ENST00000403136 Q86TA4 180 aa10.11□□□□□ -0.79
CEACAM1-206ENST00000403136 TMEM183AQ8IXX5 376 aa10.11□□□□□ -0.79
CEACAM1-206ENST00000403136 PYGO2Q9BRQ0 406 aa10.11□□□□□ -0.79
CEACAM1-206ENST00000403136 CLEC5AQ9NY25 188 aa10.11□□□□□ -0.79
CEACAM1-206ENST00000403136 ZFP30Q9Y2G7 519 aa10.11□□□□□ -0.79
CEACAM1-206ENST00000403136 V9GYV3 84 aa10.11□□□□□ -0.79
CEACAM1-206ENST00000403136 NF1P21359 2839 aa10.1□□□□□ -0.79
CEACAM1-206ENST00000403136 HIVEP1P15822 2718 aa10.1□□□□□ -0.79
CEACAM1-206ENST00000403136 FOLR2P14207 255 aa10.1□□□□□ -0.79
CEACAM1-206ENST00000403136 EDN2P20800 178 aa10.1□□□□□ -0.79
CEACAM1-206ENST00000403136 KLF5Q13887 457 aaPredicted RBP10.1□□□□□ -0.79
CEACAM1-206ENST00000403136 KHDC1LQ5JSQ8 128 aa10.1□□□□□ -0.79
CEACAM1-206ENST00000403136 IBA57Q5T440 356 aaKnown RBP10.1□□□□□ -0.79
CEACAM1-206ENST00000403136 KCNIP4Q6PIL6 250 aa10.1□□□□□ -0.79
CEACAM1-206ENST00000403136 FAM231DQ6ZW35 169 aa10.1□□□□□ -0.79
CEACAM1-206ENST00000403136 RNF182Q8N6D2 247 aa10.1□□□□□ -0.79
CEACAM1-206ENST00000403136 FAM210BQ96KR6 192 aa10.1□□□□□ -0.79
CEACAM1-206ENST00000403136 C16orf92Q96LL3 132 aa10.1□□□□□ -0.79
CEACAM1-206ENST00000403136 BIN3Q9NQY0 253 aa10.1□□□□□ -0.79
CEACAM1-206ENST00000403136 IGKV2-40A0A087WW87 121 aaPredicted RBP10.09□□□□□ -0.79
CEACAM1-206ENST00000403136 FBLL1A6NHQ2 334 aaKnown RBP10.09□□□□□ -0.79
CEACAM1-206ENST00000403136 A8MWP6 167 aa10.09□□□□□ -0.79
CEACAM1-206ENST00000403136 LINC01619G3V211 115 aa10.09□□□□□ -0.79
CEACAM1-206ENST00000403136 NDUFA7O95182 113 aa10.09□□□□□ -0.79
CEACAM1-206ENST00000403136 IGKV2D-40P01614 121 aaPredicted RBP10.09□□□□□ -0.79
CEACAM1-206ENST00000403136 BMI1P35226 326 aa10.09□□□□□ -0.79
CEACAM1-206ENST00000403136 FAM3BP58499 235 aaPredicted RBP10.09□□□□□ -0.79
CEACAM1-206ENST00000403136 RPL11P62913 178 aaKnown RBP10.09□□□□□ -0.79
CEACAM1-206ENST00000403136 PRR27Q6MZM9 219 aa10.09□□□□□ -0.79
CEACAM1-206ENST00000403136 C1QL4Q86Z23 238 aa10.09□□□□□ -0.79
CEACAM1-206ENST00000403136 NUDT10Q8NFP7 164 aa10.09□□□□□ -0.79
CEACAM1-206ENST00000403136 OR11H1Q8NG94 326 aa10.09□□□□□ -0.79
CEACAM1-206ENST00000403136 OR1N2Q8NGR9 330 aa10.09□□□□□ -0.79
CEACAM1-206ENST00000403136 DPF1Q92782 380 aa10.09□□□□□ -0.79
CEACAM1-206ENST00000403136 MRPL53Q96EL3 112 aaKnown RBP10.09□□□□□ -0.79
CEACAM1-206ENST00000403136 NUDT11Q96G61 164 aa10.09□□□□□ -0.79
CEACAM1-206ENST00000403136 IL36BQ9NZH7 164 aa10.09□□□□□ -0.79
CEACAM1-206ENST00000403136 PRAC2D3DTV9 90 aa10.09□□□□□ -0.79
CEACAM1-206ENST00000403136 DEFB136Q30KP8 78 aa10.09□□□□□ -0.79
CEACAM1-206ENST00000403136 KLHL30-AS1Q8NEE0 82 aa10.09□□□□□ -0.79
CEACAM1-206ENST00000403136 NRN1Q9NPD7 142 aa10.09□□□□□ -0.79
CEACAM1-206ENST00000403136 CUBNO60494 3623 aa10.08□□□□□ -0.8
CEACAM1-206ENST00000403136 A0A1W2PPQ1 181 aa10.08□□□□□ -0.8
CEACAM1-206ENST00000403136 GATCO43716 136 aaKnown RBP10.08□□□□□ -0.8
CEACAM1-206ENST00000403136 CD28P10747 220 aa10.08□□□□□ -0.8
CEACAM1-206ENST00000403136 RPS10P46783 165 aaKnown RBP10.08□□□□□ -0.8
CEACAM1-206ENST00000403136 SLURP1P55000 103 aa10.08□□□□□ -0.8
CEACAM1-206ENST00000403136 LINC00322Q6ZN03 302 aaPredicted RBP10.08□□□□□ -0.8
CEACAM1-206ENST00000403136 TCF24Q7RTU0 167 aa10.08□□□□□ -0.8
CEACAM1-206ENST00000403136 VGLL1Q99990 258 aa10.08□□□□□ -0.8
CEACAM1-206ENST00000403136 RBAKDNA6NC62 111 aa10.07□□□□□ -0.8
CEACAM1-206ENST00000403136 ZNF705GA8MUZ8 300 aaPredicted RBP10.07□□□□□ -0.8
CEACAM1-206ENST00000403136 HAX1O00165 279 aa10.07□□□□□ -0.8
CEACAM1-206ENST00000403136 SOCS3O14543 225 aa10.07□□□□□ -0.8
CEACAM1-206ENST00000403136 TCF21O43680 179 aa10.07□□□□□ -0.8
CEACAM1-206ENST00000403136 CBLN1P23435 193 aa10.07□□□□□ -0.8
CEACAM1-206ENST00000403136 HIST2H2BDQ6DRA6 164 aa10.07□□□□□ -0.8
CEACAM1-206ENST00000403136 C11orf44Q8N8P7 122 aa10.07□□□□□ -0.8
CEACAM1-206ENST00000403136 ZNF492Q9P255 531 aa10.07□□□□□ -0.8
CEACAM1-206ENST00000403136 MLXQ9UH92 298 aa10.07□□□□□ -0.8
CEACAM1-206ENST00000403136 C19orf71A6NCJ1 209 aa10.06□□□□□ -0.8
CEACAM1-206ENST00000403136 C2orf70A6NJV1 201 aa10.06□□□□□ -0.8
CEACAM1-206ENST00000403136 CRLF1O75462 422 aa10.06□□□□□ -0.8
CEACAM1-206ENST00000403136 SAPCD1Q5SSQ6 148 aa10.06□□□□□ -0.8
CEACAM1-206ENST00000403136 ASCL2Q99929 193 aa10.06□□□□□ -0.8
CEACAM1-206ENST00000403136 RNF114Q9Y508 228 aa10.06□□□□□ -0.8
CEACAM1-206ENST00000403136 SELENOKQ9Y6D0 94 aa10.06□□□□□ -0.8
CEACAM1-206ENST00000403136 IGKV3-7A0A075B6H7 116 aa10.06□□□□□ -0.8
CEACAM1-206ENST00000403136 C1orf196B1AJZ1 125 aa10.06□□□□□ -0.8
CEACAM1-206ENST00000403136 DAZAP1Q96EP5 407 aaKnown RBP10.06□□□□□ -0.8
CEACAM1-206ENST00000403136 ZC2HC1AQ96GY0 325 aa10.06□□□□□ -0.8
CEACAM1-206ENST00000403136 BTF3L4Q96K17 158 aa10.06□□□□□ -0.8
CEACAM1-206ENST00000403136 C20orf173Q96LM9 149 aa10.06□□□□□ -0.8
CEACAM1-206ENST00000403136 DUX3Q96PT4 197 aa10.06□□□□□ -0.8
CEACAM1-206ENST00000403136 PRR25Q96S07 402 aa10.06□□□□□ -0.8
CEACAM1-206ENST00000403136 CITED2Q99967 270 aaPredicted RBP10.06□□□□□ -0.8
CEACAM1-206ENST00000403136 TSSC4Q9Y5U2 329 aaPredicted RBP10.06□□□□□ -0.8
CEACAM1-206ENST00000403136 FN1P02751 2386 aaKnown RBP10.05□□□□□ -0.8
CEACAM1-206ENST00000403136 ERCC8Q13216 396 aa10.05□□□□□ -0.8
CEACAM1-206ENST00000403136 COX8CQ7Z4L0 72 aa10.05□□□□□ -0.8
CEACAM1-206ENST00000403136 C8orf49Q96NF6 230 aa10.05□□□□□ -0.8
CEACAM1-206ENST00000403136 SRD5A3Q9H8P0 318 aa10.05□□□□□ -0.8
CEACAM1-206ENST00000403136 TRAV9-1A0A075B6T8 112 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms