RNA–Protein interactions for RNA: ENST00000399804.5

SCAF4-202, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF4, Length 4,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-202ENST00000399804 RNASE4P34096 147 aaKnown RBP11.07□□□□□ -0.64
SCAF4-202ENST00000399804 PIP4P2Q8N4L2 257 aa11.07□□□□□ -0.64
SCAF4-202ENST00000399804 WFDC12Q8WWY7 111 aa11.07□□□□□ -0.64
SCAF4-202ENST00000399804 TSPOP30536 169 aa11.07□□□□□ -0.64
SCAF4-202ENST00000399804 PDE6HQ13956 83 aa11.07□□□□□ -0.64
SCAF4-202ENST00000399804 ZNF124Q15973 351 aa11.07□□□□□ -0.64
SCAF4-202ENST00000399804 FCER1GP30273 86 aa11.07□□□□□ -0.64
SCAF4-202ENST00000399804 FBLN7Q53RD9 439 aa11.07□□□□□ -0.64
SCAF4-202ENST00000399804 A0A1B0GUS0 222 aa11.06□□□□□ -0.64
SCAF4-202ENST00000399804 INS-IGF2F8WCM5 200 aa11.06□□□□□ -0.64
SCAF4-202ENST00000399804 Q6ZN92 141 aa11.06□□□□□ -0.64
SCAF4-202ENST00000399804 Q86TA4 180 aa11.06□□□□□ -0.64
SCAF4-202ENST00000399804 C17orf77Q96MU5 243 aa11.06□□□□□ -0.64
SCAF4-202ENST00000399804 SPOCK3Q9BQ16 436 aa11.06□□□□□ -0.64
SCAF4-202ENST00000399804 RHPN1-AS1Q9BWJ2 59 aa11.06□□□□□ -0.64
SCAF4-202ENST00000399804 PRELID3AQ96N28 172 aa11.06□□□□□ -0.64
SCAF4-202ENST00000399804 MAP1LC3AQ9H492 121 aa11.06□□□□□ -0.64
SCAF4-202ENST00000399804 PRRC2AP48634 2157 aaKnown RBP11.06□□□□□ -0.64
SCAF4-202ENST00000399804 TRBV20OR9-2A0A075B6H5 130 aa11.06□□□□□ -0.64
SCAF4-202ENST00000399804 H3BRN7 92 aa11.06□□□□□ -0.64
SCAF4-202ENST00000399804 FSTL3O95633 263 aa11.06□□□□□ -0.64
SCAF4-202ENST00000399804 BTF3P20290 206 aaKnown RBP11.06□□□□□ -0.64
SCAF4-202ENST00000399804 JOSD1Q15040 202 aaPredicted RBP11.06□□□□□ -0.64
SCAF4-202ENST00000399804 TMEM256Q8N2U0 113 aa11.06□□□□□ -0.64
SCAF4-202ENST00000399804 SORL1Q92673 2214 aa11.05□□□□□ -0.64
SCAF4-202ENST00000399804 DEFB112Q30KQ8 113 aa11.05□□□□□ -0.64
SCAF4-202ENST00000399804 ATOH7Q8N100 152 aa11.05□□□□□ -0.64
SCAF4-202ENST00000399804 PEF1Q9UBV8 284 aaKnown RBP11.05□□□□□ -0.64
SCAF4-202ENST00000399804 IGHV4-59P01825 116 aa11.05□□□□□ -0.64
SCAF4-202ENST00000399804 BLCAPP62952 87 aa11.05□□□□□ -0.64
SCAF4-202ENST00000399804 PTPRBP23467 1997 aa11.05□□□□□ -0.64
SCAF4-202ENST00000399804 FRYQ5TBA9 3013 aa11.05□□□□□ -0.64
SCAF4-202ENST00000399804 ACTL10Q5JWF8 245 aa11.05□□□□□ -0.64
SCAF4-202ENST00000399804 FAM74A4Q5TZK3 123 aa11.05□□□□□ -0.64
SCAF4-202ENST00000399804 DYNAPQ8N1N2 210 aa11.05□□□□□ -0.64
SCAF4-202ENST00000399804 RNF182Q8N6D2 247 aa11.05□□□□□ -0.64
SCAF4-202ENST00000399804 IGLV11-55A0A075B6I3 123 aa11.04□□□□□ -0.64
SCAF4-202ENST00000399804 ZNF688P0C7X2 276 aa11.04□□□□□ -0.64
SCAF4-202ENST00000399804 DOPEY1Q5JWR5 2465 aa11.04□□□□□ -0.64
SCAF4-202ENST00000399804 ASIPP42127 132 aa11.04□□□□□ -0.64
SCAF4-202ENST00000399804 TMEM14CQ9P0S9 112 aa11.04□□□□□ -0.64
SCAF4-202ENST00000399804 NDUFA3O95167 84 aa11.04□□□□□ -0.64
SCAF4-202ENST00000399804 APOHP02749 345 aaPredicted RBP11.04□□□□□ -0.64
SCAF4-202ENST00000399804 TCTAP57738 103 aa11.04□□□□□ -0.64
SCAF4-202ENST00000399804 ERCC8Q13216 396 aa11.04□□□□□ -0.64
SCAF4-202ENST00000399804 OR10AG1Q8NH19 301 aa11.04□□□□□ -0.64
SCAF4-202ENST00000399804 FAM167A-AS1Q96KT0 104 aa11.04□□□□□ -0.64
SCAF4-202ENST00000399804 EREGO14944 169 aa11.03□□□□□ -0.64
SCAF4-202ENST00000399804 TNRC18O15417 2968 aaPredicted RBP11.03□□□□□ -0.64
SCAF4-202ENST00000399804 ZNF138P52744 262 aa11.03□□□□□ -0.64
SCAF4-202ENST00000399804 JMJD1CQ15652 2540 aa11.03□□□□□ -0.64
SCAF4-202ENST00000399804 PSMG4Q5JS54 123 aa11.03□□□□□ -0.64
SCAF4-202ENST00000399804 C9orf139Q6ZV77 190 aa11.03□□□□□ -0.64
SCAF4-202ENST00000399804 MYOZ3Q8TDC0 251 aa11.03□□□□□ -0.64
SCAF4-202ENST00000399804 A0A1B0GW15 77 aa11.03□□□□□ -0.64
SCAF4-202ENST00000399804 PRSS46E5RG02 174 aa11.03□□□□□ -0.64
SCAF4-202ENST00000399804 J3QLI3 93 aa11.03□□□□□ -0.64
SCAF4-202ENST00000399804 DAZ1Q9NQZ3 744 aaKnown RBP11.03□□□□□ -0.64
SCAF4-202ENST00000399804 LDLRAD2Q5SZI1 272 aa11.03□□□□□ -0.64
SCAF4-202ENST00000399804 ATP5L2Q7Z4Y8 100 aa11.03□□□□□ -0.64
SCAF4-202ENST00000399804 ORMDL3Q8N138 153 aa11.03□□□□□ -0.64
SCAF4-202ENST00000399804 RAX2Q96IS3 184 aa11.03□□□□□ -0.64
SCAF4-202ENST00000399804 YPEL4Q96NS1 127 aa11.03□□□□□ -0.64
SCAF4-202ENST00000399804 V9GYV3 84 aa11.03□□□□□ -0.64
SCAF4-202ENST00000399804 K7EN84 100 aa11.03□□□□□ -0.64
SCAF4-202ENST00000399804 SH2D1AO60880 128 aa11.03□□□□□ -0.64
SCAF4-202ENST00000399804 SYNJ2BPP57105 145 aa11.03□□□□□ -0.64
SCAF4-202ENST00000399804 NDUFAF3Q9BU61 184 aa11.03□□□□□ -0.64
SCAF4-202ENST00000399804 NRN1Q9NPD7 142 aa11.03□□□□□ -0.64
SCAF4-202ENST00000399804 M0R143 59 aa11.02□□□□□ -0.64
SCAF4-202ENST00000399804 OVOL1O14753 267 aa11.02□□□□□ -0.64
SCAF4-202ENST00000399804 TNFRSF13BO14836 293 aaPredicted RBP11.02□□□□□ -0.64
SCAF4-202ENST00000399804 PEMTQ9UBM1 199 aa11.02□□□□□ -0.64
SCAF4-202ENST00000399804 ODF3BA8MYP8 253 aa11.02□□□□□ -0.65
SCAF4-202ENST00000399804 PAX1P15863 534 aa11.02□□□□□ -0.65
SCAF4-202ENST00000399804 LYZL1Q6UWQ5 148 aa11.02□□□□□ -0.65
SCAF4-202ENST00000399804 IL17RELQ6ZVW7 336 aa11.02□□□□□ -0.65
SCAF4-202ENST00000399804 TRAV21A0A0B4J279 112 aa11.02□□□□□ -0.65
SCAF4-202ENST00000399804 A0A1W2PPR1 153 aa11.02□□□□□ -0.65
SCAF4-202ENST00000399804 DEFB113Q30KQ7 82 aa11.02□□□□□ -0.65
SCAF4-202ENST00000399804 SAMD13Q5VXD3 122 aa11.02□□□□□ -0.65
SCAF4-202ENST00000399804 TMEM190Q8WZ59 177 aa11.02□□□□□ -0.65
SCAF4-202ENST00000399804 MTORP42345 2549 aa11.02□□□□□ -0.65
SCAF4-202ENST00000399804 A8MWP6 167 aa11.01□□□□□ -0.65
SCAF4-202ENST00000399804 CTSGP08311 255 aa11.01□□□□□ -0.65
SCAF4-202ENST00000399804 SYT8Q8NBV8 401 aa11.01□□□□□ -0.65
SCAF4-202ENST00000399804 KCNS1Q96KK3 526 aa11.01□□□□□ -0.65
SCAF4-202ENST00000399804 KLK15Q9H2R5 256 aa11.01□□□□□ -0.65
SCAF4-202ENST00000399804 GOLT1BQ9Y3E0 138 aa11.01□□□□□ -0.65
SCAF4-202ENST00000399804 CRYGCP07315 174 aa11.01□□□□□ -0.65
SCAF4-202ENST00000399804 TMEM95Q3KNT9 176 aa11.01□□□□□ -0.65
SCAF4-202ENST00000399804 FCN3O75636 299 aa11.01□□□□□ -0.65
SCAF4-202ENST00000399804 CFHR4Q92496 578 aa11.01□□□□□ -0.65
SCAF4-202ENST00000399804 ZNF414Q96IQ9 312 aa11.01□□□□□ -0.65
SCAF4-202ENST00000399804 IGKV1D-37A0A075B6S9 117 aa11□□□□□ -0.65
SCAF4-202ENST00000399804 PMCHL1Q16048 86 aa11□□□□□ -0.65
SCAF4-202ENST00000399804 FANCD2OSQ96PS1 177 aa11□□□□□ -0.65
SCAF4-202ENST00000399804 C2CD3Q4AC94 2353 aa11□□□□□ -0.65
SCAF4-202ENST00000399804 PF4P02776 101 aa11□□□□□ -0.65
SCAF4-202ENST00000399804 ZNF324O75467 553 aaPredicted RBP11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms