RNA–Protein interactions for RNA: ENST00000399649.5

CACNA1C-219, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,529 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-219ENST00000399649 MBD3L5A6NJ08 208 aaPredicted RBP9.92□□□□□ -0.82
CACNA1C-219ENST00000399649 UBE2E1P51965 193 aa9.92□□□□□ -0.82
CACNA1C-219ENST00000399649 MBD3L2Q8NHZ7 208 aaPredicted RBP9.92□□□□□ -0.82
CACNA1C-219ENST00000399649 ARID2Q68CP9 1835 aa9.92□□□□□ -0.82
CACNA1C-219ENST00000399649 IGF2BP2-AS1Q96M15 143 aa9.92□□□□□ -0.82
CACNA1C-219ENST00000399649 RALGAPA2Q2PPJ7 1873 aa9.92□□□□□ -0.82
CACNA1C-219ENST00000399649 NBL1P41271 181 aa9.92□□□□□ -0.82
CACNA1C-219ENST00000399649 HERVK_113P63121 156 aa9.92□□□□□ -0.82
CACNA1C-219ENST00000399649 PNRC2Q9NPJ4 139 aaKnown RBP9.92□□□□□ -0.82
CACNA1C-219ENST00000399649 KIAA0100Q14667 2235 aaKnown RBP9.91□□□□□ -0.82
CACNA1C-219ENST00000399649 C9orf118A6NHY6 69 aa9.91□□□□□ -0.82
CACNA1C-219ENST00000399649 DEFB105AQ8NG35 78 aa9.91□□□□□ -0.82
CACNA1C-219ENST00000399649 ANGP03950 147 aaKnown RBP9.91□□□□□ -0.82
CACNA1C-219ENST00000399649 IGHV1-69DA0A0B4J2H0 117 aa9.91□□□□□ -0.82
CACNA1C-219ENST00000399649 IGHV1-69P01742 117 aa9.91□□□□□ -0.82
CACNA1C-219ENST00000399649 EFNA2O43921 213 aa9.91□□□□□ -0.82
CACNA1C-219ENST00000399649 PRB1P04280 392 aa9.91□□□□□ -0.82
CACNA1C-219ENST00000399649 GAS1P54826 345 aa9.91□□□□□ -0.82
CACNA1C-219ENST00000399649 MLANAQ16655 118 aa9.91□□□□□ -0.82
CACNA1C-219ENST00000399649 TRAV26-2A0A0B4J265 109 aa9.9□□□□□ -0.82
CACNA1C-219ENST00000399649 F8W1H4 67 aa9.9□□□□□ -0.82
CACNA1C-219ENST00000399649 EGR2P11161 476 aaPredicted RBP9.9□□□□□ -0.82
CACNA1C-219ENST00000399649 FAM104BQ5XKR9 115 aa9.9□□□□□ -0.82
CACNA1C-219ENST00000399649 IGHV1-24A0A0C4DH33 117 aa9.9□□□□□ -0.82
CACNA1C-219ENST00000399649 NDUFA12Q9UI09 145 aa9.9□□□□□ -0.82
CACNA1C-219ENST00000399649 A0A096LPF7 62 aa9.9□□□□□ -0.82
CACNA1C-219ENST00000399649 YPEL3P61236 119 aaPredicted RBP9.9□□□□□ -0.82
CACNA1C-219ENST00000399649 MDS2Q8NDY4 140 aa9.9□□□□□ -0.82
CACNA1C-219ENST00000399649 TINCRA0A1B0GVN0 87 aa9.9□□□□□ -0.82
CACNA1C-219ENST00000399649 A0A1W2PPI3 338 aa9.9□□□□□ -0.82
CACNA1C-219ENST00000399649 E7EQL1 145 aa9.9□□□□□ -0.82
CACNA1C-219ENST00000399649 CDKN1BP46527 198 aa9.9□□□□□ -0.82
CACNA1C-219ENST00000399649 LINC00205P59089 165 aa9.9□□□□□ -0.82
CACNA1C-219ENST00000399649 Q0VG73 95 aa9.9□□□□□ -0.82
CACNA1C-219ENST00000399649 C5orf47Q569G3 176 aa9.9□□□□□ -0.82
CACNA1C-219ENST00000399649 CLPSL2Q6UWE3 100 aa9.9□□□□□ -0.82
CACNA1C-219ENST00000399649 CARD19Q96LW7 228 aa9.9□□□□□ -0.82
CACNA1C-219ENST00000399649 TRAV12-2A0A075B6T6 113 aa9.9□□□□□ -0.83
CACNA1C-219ENST00000399649 SLAQ13239 276 aa9.9□□□□□ -0.83
CACNA1C-219ENST00000399649 C8orf86Q6ZUL3 223 aa9.9□□□□□ -0.83
CACNA1C-219ENST00000399649 CEND1Q8N111 149 aa9.9□□□□□ -0.83
CACNA1C-219ENST00000399649 ZNF664Q8N3J9 261 aa9.9□□□□□ -0.83
CACNA1C-219ENST00000399649 LINC00479Q96M42 142 aa9.9□□□□□ -0.83
CACNA1C-219ENST00000399649 DKK4Q9UBT3 224 aa9.9□□□□□ -0.83
CACNA1C-219ENST00000399649 DOCK4Q8N1I0 1966 aa9.89□□□□□ -0.83
CACNA1C-219ENST00000399649 LY6HO94772 140 aa9.89□□□□□ -0.83
CACNA1C-219ENST00000399649 SDHAF1A6NFY7 115 aa9.89□□□□□ -0.83
CACNA1C-219ENST00000399649 MRPL51Q4U2R6 128 aaKnown RBP9.89□□□□□ -0.83
CACNA1C-219ENST00000399649 MDC1Q14676 2089 aaKnown RBP9.89□□□□□ -0.83
CACNA1C-219ENST00000399649 NDUFA4O00483 81 aa9.89□□□□□ -0.83
CACNA1C-219ENST00000399649 IGKV1-16P04430 117 aa9.89□□□□□ -0.83
CACNA1C-219ENST00000399649 C5orf24Q7Z6I8 188 aa9.89□□□□□ -0.83
CACNA1C-219ENST00000399649 ATP6V0BQ99437 205 aa9.89□□□□□ -0.83
CACNA1C-219ENST00000399649 TSSC4Q9Y5U2 329 aaPredicted RBP9.89□□□□□ -0.83
CACNA1C-219ENST00000399649 SBF2Q86WG5 1849 aa9.89□□□□□ -0.83
CACNA1C-219ENST00000399649 SHISA9B4DS77 424 aa9.89□□□□□ -0.83
CACNA1C-219ENST00000399649 CFPP27918 469 aa9.89□□□□□ -0.83
CACNA1C-219ENST00000399649 IGKV2D-24A0A075B6R9 120 aa9.88□□□□□ -0.83
CACNA1C-219ENST00000399649 ZNF134P52741 427 aa9.88□□□□□ -0.83
CACNA1C-219ENST00000399649 PRSS57Q6UWY2 283 aa9.88□□□□□ -0.83
CACNA1C-219ENST00000399649 CRYGCP07315 174 aa9.88□□□□□ -0.83
CACNA1C-219ENST00000399649 ANKRD29Q8N6D5 301 aa9.88□□□□□ -0.83
CACNA1C-219ENST00000399649 IGKV1-39P01597 117 aa9.88□□□□□ -0.83
CACNA1C-219ENST00000399649 IGKV1D-39P04432 117 aa9.88□□□□□ -0.83
CACNA1C-219ENST00000399649 RBM3P98179 157 aaKnown RBP9.88□□□□□ -0.83
CACNA1C-219ENST00000399649 RALGAPA1Q6GYQ0 2036 aa9.88□□□□□ -0.83
CACNA1C-219ENST00000399649 IGKV1OR2-108A0A075B7D4 117 aa9.88□□□□□ -0.83
CACNA1C-219ENST00000399649 TEX48A0A1B0GUV7 120 aa9.88□□□□□ -0.83
CACNA1C-219ENST00000399649 Q6ZS49 121 aa9.88□□□□□ -0.83
CACNA1C-219ENST00000399649 POLR3KQ9Y2Y1 108 aaPredicted RBP9.88□□□□□ -0.83
CACNA1C-219ENST00000399649 IGHV2-70DA0A0C4DH43 119 aa9.87□□□□□ -0.83
CACNA1C-219ENST00000399649 PRB2P02812 416 aaPredicted RBP9.87□□□□□ -0.83
CACNA1C-219ENST00000399649 SRSF2Q01130 221 aaKnown RBP9.87□□□□□ -0.83
CACNA1C-219ENST00000399649 MESP1Q9BRJ9 268 aa9.87□□□□□ -0.83
CACNA1C-219ENST00000399649 LYL1P12980 280 aa9.87□□□□□ -0.83
CACNA1C-219ENST00000399649 PRO1854Q9UHT4 67 aa9.87□□□□□ -0.83
CACNA1C-219ENST00000399649 RPL18AQ02543 176 aaKnown RBP9.87□□□□□ -0.83
CACNA1C-219ENST00000399649 ARID1AO14497 2285 aa9.87□□□□□ -0.83
CACNA1C-219ENST00000399649 MAPK1IP1LQ8NDC0 245 aa9.87□□□□□ -0.83
CACNA1C-219ENST00000399649 GBF1Q92538 1859 aa9.87□□□□□ -0.83
CACNA1C-219ENST00000399649 TRBV19A0A075B6N1 114 aa9.87□□□□□ -0.83
CACNA1C-219ENST00000399649 LOC285556D6RIA3 1793 aa9.86□□□□□ -0.83
CACNA1C-219ENST00000399649 J3QLI3 93 aa9.86□□□□□ -0.83
CACNA1C-219ENST00000399649 PYY3Q5JQD4 70 aa9.86□□□□□ -0.83
CACNA1C-219ENST00000399649 CFHR4Q92496 578 aa9.86□□□□□ -0.83
CACNA1C-219ENST00000399649 C18orf32Q8TCD1 76 aa9.86□□□□□ -0.83
CACNA1C-219ENST00000399649 ZNF833PQ6ZTB9 187 aa9.86□□□□□ -0.83
CACNA1C-219ENST00000399649 REG4Q9BYZ8 158 aa9.86□□□□□ -0.83
CACNA1C-219ENST00000399649 A0A0G2JRQ6 117 aa9.86□□□□□ -0.83
CACNA1C-219ENST00000399649 ORMDL1Q9P0S3 153 aa9.86□□□□□ -0.83
CACNA1C-219ENST00000399649 H3BRN7 92 aa9.85□□□□□ -0.83
CACNA1C-219ENST00000399649 K7EP34 96 aa9.85□□□□□ -0.83
CACNA1C-219ENST00000399649 TEX36Q5VZQ5 186 aa9.85□□□□□ -0.83
CACNA1C-219ENST00000399649 C15orf53Q8NAA6 179 aa9.85□□□□□ -0.83
CACNA1C-219ENST00000399649 TMEM14BQ9NUH8 114 aa9.85□□□□□ -0.83
CACNA1C-219ENST00000399649 BRCA1P38398 1863 aaKnown RBP9.85□□□□□ -0.83
CACNA1C-219ENST00000399649 MST1P26927 711 aa9.85□□□□□ -0.83
CACNA1C-219ENST00000399649 NDUFA4L2Q9NRX3 87 aa9.85□□□□□ -0.83
CACNA1C-219ENST00000399649 NYNRINQ9P2P1 1898 aaKnown RBP9.85□□□□□ -0.83
CACNA1C-219ENST00000399649 LGALS9BQ3B8N2 356 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms