RNA–Protein interactions for RNA: ENST00000399299.5

SMIM11A-203, Transcript of small integral membrane protein 11A, humanhuman

TSL 1 (best) BASIC

Gene SMIM11A, Length 1,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-203ENST00000399299 LYRM9A8MSI8 78 aa10.58□□□□□ -0.72
SMIM11A-203ENST00000399299 ZNF705GA8MUZ8 300 aaPredicted RBP10.58□□□□□ -0.72
SMIM11A-203ENST00000399299 H3BTX0 84 aa10.58□□□□□ -0.72
SMIM11A-203ENST00000399299 SSNA1O43805 119 aa10.58□□□□□ -0.72
SMIM11A-203ENST00000399299 PET100P0DJ07 73 aa10.58□□□□□ -0.72
SMIM11A-203ENST00000399299 PDE6HQ13956 83 aa10.58□□□□□ -0.72
SMIM11A-203ENST00000399299 OR10J6PQ8NGY7 276 aa10.58□□□□□ -0.72
SMIM11A-203ENST00000399299 MRPL53Q96EL3 112 aaKnown RBP10.58□□□□□ -0.72
SMIM11A-203ENST00000399299 C20orf144Q9BQM9 153 aa10.58□□□□□ -0.72
SMIM11A-203ENST00000399299 KCNIP2Q9NS61 270 aa10.58□□□□□ -0.72
SMIM11A-203ENST00000399299 ZNF586Q9NXT0 402 aa10.58□□□□□ -0.72
SMIM11A-203ENST00000399299 TRBV19A0A075B6N1 114 aa10.57□□□□□ -0.72
SMIM11A-203ENST00000399299 PRAC2D3DTV9 90 aa10.57□□□□□ -0.72
SMIM11A-203ENST00000399299 HIST1H1EP10412 219 aaKnown RBP10.57□□□□□ -0.72
SMIM11A-203ENST00000399299 TAS2R60P59551 318 aa10.57□□□□□ -0.72
SMIM11A-203ENST00000399299 DAD1P61803 113 aa10.57□□□□□ -0.72
SMIM11A-203ENST00000399299 CLINT1Q14677 625 aa10.57□□□□□ -0.72
SMIM11A-203ENST00000399299 THAP6Q8TBB0 222 aa10.57□□□□□ -0.72
SMIM11A-203ENST00000399299 ODF3Q96PU9 254 aa10.57□□□□□ -0.72
SMIM11A-203ENST00000399299 WDR61Q9GZS3 305 aaKnown RBP10.57□□□□□ -0.72
SMIM11A-203ENST00000399299 NPIPB6E9PJ23 425 aa10.56□□□□□ -0.72
SMIM11A-203ENST00000399299 MPC2O95563 127 aa10.56□□□□□ -0.72
SMIM11A-203ENST00000399299 P0DMU3 169 aa10.56□□□□□ -0.72
SMIM11A-203ENST00000399299 FAM231AP0DMU4 169 aa10.56□□□□□ -0.72
SMIM11A-203ENST00000399299 FAM231CP0DMU5 169 aa10.56□□□□□ -0.72
SMIM11A-203ENST00000399299 GCSAMLQ5JQS6 135 aa10.56□□□□□ -0.72
SMIM11A-203ENST00000399299 LINC01587Q99440 93 aa10.56□□□□□ -0.72
SMIM11A-203ENST00000399299 FRAS1Q86XX4 4008 aa10.55□□□□□ -0.72
SMIM11A-203ENST00000399299 DNAH6Q9C0G6 4158 aa10.55□□□□□ -0.72
SMIM11A-203ENST00000399299 DNAH10Q8IVF4 4471 aa10.55□□□□□ -0.72
SMIM11A-203ENST00000399299 PLAC8L1A1L4L8 177 aa10.55□□□□□ -0.72
SMIM11A-203ENST00000399299 H7BYZ3 331 aa10.55□□□□□ -0.72
SMIM11A-203ENST00000399299 PRM2P04554 102 aa10.55□□□□□ -0.72
SMIM11A-203ENST00000399299 PRB4P10163 310 aaPredicted RBP10.55□□□□□ -0.72
SMIM11A-203ENST00000399299 ZNF493Q6ZR52 646 aa10.55□□□□□ -0.72
SMIM11A-203ENST00000399299 C16orf74Q96GX8 76 aa10.55□□□□□ -0.72
SMIM11A-203ENST00000399299 ATP5SQ99766 215 aa10.55□□□□□ -0.72
SMIM11A-203ENST00000399299 MRPL32Q9BYC8 188 aaKnown RBP10.55□□□□□ -0.72
SMIM11A-203ENST00000399299 PLA2G2EQ9NZK7 142 aa10.55□□□□□ -0.72
SMIM11A-203ENST00000399299 PRELID1Q9Y255 219 aa10.55□□□□□ -0.72
SMIM11A-203ENST00000399299 HSPB11Q9Y547 144 aa10.55□□□□□ -0.72
SMIM11A-203ENST00000399299 C17orf112F2Z3M2 114 aa10.54□□□□□ -0.72
SMIM11A-203ENST00000399299 NDUFB4O95168 129 aa10.54□□□□□ -0.72
SMIM11A-203ENST00000399299 PYYP10082 97 aa10.54□□□□□ -0.72
SMIM11A-203ENST00000399299 AZU1P20160 251 aa10.54□□□□□ -0.72
SMIM11A-203ENST00000399299 GFI1BQ5VTD9 330 aa10.54□□□□□ -0.72
SMIM11A-203ENST00000399299 FAM167A-AS1Q96KT0 104 aa10.54□□□□□ -0.72
SMIM11A-203ENST00000399299 SLC25A2Q9BXI2 301 aa10.54□□□□□ -0.72
SMIM11A-203ENST00000399299 TIMM9Q9Y5J7 89 aa10.54□□□□□ -0.72
SMIM11A-203ENST00000399299 M0R3E3 92 aa10.53□□□□□ -0.72
SMIM11A-203ENST00000399299 CT45A10P0DMU9 189 aa10.53□□□□□ -0.72
SMIM11A-203ENST00000399299 LEPP41159 167 aa10.53□□□□□ -0.72
SMIM11A-203ENST00000399299 KIR3DS1Q14943 382 aa10.53□□□□□ -0.72
SMIM11A-203ENST00000399299 MIR17HGQ75NE6 70 aa10.53□□□□□ -0.72
SMIM11A-203ENST00000399299 POM121L12Q8N7R1 296 aa10.53□□□□□ -0.72
SMIM11A-203ENST00000399299 RNASE8Q8TDE3 154 aaKnown RBP10.53□□□□□ -0.72
SMIM11A-203ENST00000399299 TMEM263Q8WUH6 116 aaKnown RBP10.53□□□□□ -0.72
SMIM11A-203ENST00000399299 PTTG1O95997 202 aa10.52□□□□□ -0.73
SMIM11A-203ENST00000399299 HTN3P15516 51 aa10.52□□□□□ -0.73
SMIM11A-203ENST00000399299 RPL12P30050 165 aaKnown RBP10.52□□□□□ -0.73
SMIM11A-203ENST00000399299 PARD6GQ9BYG4 376 aaPredicted RBP10.52□□□□□ -0.73
SMIM11A-203ENST00000399299 OR51M1Q9H341 326 aa10.52□□□□□ -0.73
SMIM11A-203ENST00000399299 AAMDCQ9H7C9 122 aa10.52□□□□□ -0.73
SMIM11A-203ENST00000399299 MBD2Q9UBB5 411 aa10.52□□□□□ -0.73
SMIM11A-203ENST00000399299 FUT9Q9Y231 359 aa10.52□□□□□ -0.73
SMIM11A-203ENST00000399299 TIMM8BQ9Y5J9 83 aaPredicted RBP10.52□□□□□ -0.73
SMIM11A-203ENST00000399299 NBEAP1P0C6P0 100 aa10.51□□□□□ -0.73
SMIM11A-203ENST00000399299 BLNKQ8WV28 456 aa10.51□□□□□ -0.73
SMIM11A-203ENST00000399299 LINC00477Q96M19 166 aa10.51□□□□□ -0.73
SMIM11A-203ENST00000399299 ALG5Q9Y673 324 aa10.51□□□□□ -0.73
SMIM11A-203ENST00000399299 BIRC6Q9NR09 4857 aa10.5□□□□□ -0.73
SMIM11A-203ENST00000399299 IFNA5P01569 189 aa10.5□□□□□ -0.73
SMIM11A-203ENST00000399299 SLC25A5P05141 298 aaKnown RBP10.5□□□□□ -0.73
SMIM11A-203ENST00000399299 DEFB130BP0DP73 79 aa10.5□□□□□ -0.73
SMIM11A-203ENST00000399299 DEFB130AP0DP74 79 aa10.5□□□□□ -0.73
SMIM11A-203ENST00000399299 HTN1P15515 57 aa10.5□□□□□ -0.73
SMIM11A-203ENST00000399299 TMEM88Q6PEY1 159 aa10.5□□□□□ -0.73
SMIM11A-203ENST00000399299 EXOC3-AS1Q8N2X6 119 aa10.5□□□□□ -0.73
SMIM11A-203ENST00000399299 C15orf53Q8NAA6 179 aa10.5□□□□□ -0.73
SMIM11A-203ENST00000399299 FXYD5Q96DB9 178 aa10.5□□□□□ -0.73
SMIM11A-203ENST00000399299 PAXXQ9BUH6 204 aa10.5□□□□□ -0.73
SMIM11A-203ENST00000399299 CBY3A6NI87 242 aa10.49□□□□□ -0.73
SMIM11A-203ENST00000399299 ATP5G1P05496 136 aa10.49□□□□□ -0.73
SMIM11A-203ENST00000399299 ATP5G3P48201 142 aa10.49□□□□□ -0.73
SMIM11A-203ENST00000399299 ICAM4Q14773 271 aa10.49□□□□□ -0.73
SMIM11A-203ENST00000399299 RNF212Q495C1 297 aa10.49□□□□□ -0.73
SMIM11A-203ENST00000399299 FFAR4Q5NUL3 377 aa10.49□□□□□ -0.73
SMIM11A-203ENST00000399299 C9orf47Q6ZRZ4 202 aa10.49□□□□□ -0.73
SMIM11A-203ENST00000399299 CCDC28AQ8IWP9 274 aa10.49□□□□□ -0.73
SMIM11A-203ENST00000399299 SCGB1C1Q8TD33 95 aa10.49□□□□□ -0.73
SMIM11A-203ENST00000399299 RNF141Q8WVD5 230 aa10.49□□□□□ -0.73
SMIM11A-203ENST00000399299 FAM19A4Q96LR4 140 aa10.49□□□□□ -0.73
SMIM11A-203ENST00000399299 PYGO2Q9BRQ0 406 aa10.49□□□□□ -0.73
SMIM11A-203ENST00000399299 TRAV12-3A0A0B4J271 114 aa10.48□□□□□ -0.73
SMIM11A-203ENST00000399299 KLLNB2CW77 178 aa10.48□□□□□ -0.73
SMIM11A-203ENST00000399299 NMBP08949 121 aa10.48□□□□□ -0.73
SMIM11A-203ENST00000399299 CRISP2P16562 243 aa10.48□□□□□ -0.73
SMIM11A-203ENST00000399299 FCN2Q15485 313 aa10.48□□□□□ -0.73
SMIM11A-203ENST00000399299 LYPD1Q8N2G4 141 aa10.48□□□□□ -0.73
SMIM11A-203ENST00000399299 LINC00612Q8N6U2 182 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms