RNA–Protein interactions for RNA: ENST00000399082.7

HLA-DQB1-203, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-203ENST00000399082 RPL35AP18077 110 aaKnown RBP9.12□□□□□ -0.95
HLA-DQB1-203ENST00000399082 GCHFRP30047 84 aa9.12□□□□□ -0.95
HLA-DQB1-203ENST00000399082 HAGHQ16775 308 aa9.12□□□□□ -0.95
HLA-DQB1-203ENST00000399082 FOXI2Q6ZQN5 318 aa9.12□□□□□ -0.95
HLA-DQB1-203ENST00000399082 ASCL2Q99929 193 aa9.12□□□□□ -0.95
HLA-DQB1-203ENST00000399082 HLA-DRB4X5D2U9 266 aa9.12□□□□□ -0.95
HLA-DQB1-203ENST00000399082 LOC102724200A0A096LPH7 203 aaPredicted RBP9.11□□□□□ -0.95
HLA-DQB1-203ENST00000399082 CXorf1O96002 111 aa9.11□□□□□ -0.95
HLA-DQB1-203ENST00000399082 SULT1A2P50226 295 aa9.11□□□□□ -0.95
HLA-DQB1-203ENST00000399082 FGF8P55075 233 aaPredicted RBP9.11□□□□□ -0.95
HLA-DQB1-203ENST00000399082 FAM74A1Q5RGS3 127 aa9.11□□□□□ -0.95
HLA-DQB1-203ENST00000399082 ZNF738Q8NE65 137 aa9.11□□□□□ -0.95
HLA-DQB1-203ENST00000399082 FAM213BQ8TBF2 198 aa9.11□□□□□ -0.95
HLA-DQB1-203ENST00000399082 LRRC20Q8TCA0 184 aa9.11□□□□□ -0.95
HLA-DQB1-203ENST00000399082 MBD3L1Q8WWY6 194 aa9.11□□□□□ -0.95
HLA-DQB1-203ENST00000399082 RPUSD4Q96CM3 377 aaKnown RBP9.11□□□□□ -0.95
HLA-DQB1-203ENST00000399082 TMPRSS5Q9H3S3 457 aa9.11□□□□□ -0.95
HLA-DQB1-203ENST00000399082 TENM3Q9P273 2699 aa9.11□□□□□ -0.95
HLA-DQB1-203ENST00000399082 MAP1LC3B2A6NCE7 125 aa9.1□□□□□ -0.95
HLA-DQB1-203ENST00000399082 C4BPBP20851 252 aa9.1□□□□□ -0.95
HLA-DQB1-203ENST00000399082 ICAM4Q14773 271 aa9.1□□□□□ -0.95
HLA-DQB1-203ENST00000399082 AMTNQ6UX39 209 aa9.1□□□□□ -0.95
HLA-DQB1-203ENST00000399082 ALKAL2Q6UX46 152 aa9.1□□□□□ -0.95
HLA-DQB1-203ENST00000399082 STHQ8IWL8 128 aa9.1□□□□□ -0.95
HLA-DQB1-203ENST00000399082 MRPL53Q96EL3 112 aaKnown RBP9.1□□□□□ -0.95
HLA-DQB1-203ENST00000399082 MAP1LC3BQ9GZQ8 125 aa9.1□□□□□ -0.95
HLA-DQB1-203ENST00000399082 Q9H3A6 140 aa9.1□□□□□ -0.95
HLA-DQB1-203ENST00000399082 CNN1P51911 297 aaKnown RBP9.09□□□□□ -0.95
HLA-DQB1-203ENST00000399082 RANP62826 216 aaKnown RBP9.09□□□□□ -0.95
HLA-DQB1-203ENST00000399082 PSG9Q00887 426 aa9.09□□□□□ -0.95
HLA-DQB1-203ENST00000399082 DPPA3Q6W0C5 159 aa9.09□□□□□ -0.95
HLA-DQB1-203ENST00000399082 OR8A1Q8NGG7 326 aa9.09□□□□□ -0.95
HLA-DQB1-203ENST00000399082 CLUHP3Q96NS8 147 aa9.09□□□□□ -0.95
HLA-DQB1-203ENST00000399082 TM2D3Q9BRN9 247 aa9.09□□□□□ -0.95
HLA-DQB1-203ENST00000399082 RETNQ9HD89 108 aa9.09□□□□□ -0.95
HLA-DQB1-203ENST00000399082 CLEC5AQ9NY25 188 aa9.09□□□□□ -0.95
HLA-DQB1-203ENST00000399082 NBEAL2Q6ZNJ1 2754 aa9.08□□□□□ -0.96
HLA-DQB1-203ENST00000399082 KIR2DL5BA0A0G2JN68 375 aa9.08□□□□□ -0.96
HLA-DQB1-203ENST00000399082 KIR2DL5BA0A0G2JPC4 375 aa9.08□□□□□ -0.96
HLA-DQB1-203ENST00000399082 GGTLC3B5MD39 225 aa9.08□□□□□ -0.96
HLA-DQB1-203ENST00000399082 IGKV3-20P01619 116 aa9.08□□□□□ -0.96
HLA-DQB1-203ENST00000399082 EIF5AL1Q6IS14 154 aaKnown RBP9.08□□□□□ -0.96
HLA-DQB1-203ENST00000399082 KIR2DL5AQ8N109 375 aa9.08□□□□□ -0.96
HLA-DQB1-203ENST00000399082 LYPD1Q8N2G4 141 aa9.08□□□□□ -0.96
HLA-DQB1-203ENST00000399082 KIR2DL5BQ8NHK3 375 aa9.08□□□□□ -0.96
HLA-DQB1-203ENST00000399082 PRELID1Q9Y255 219 aa9.08□□□□□ -0.96
HLA-DQB1-203ENST00000399082 YTHDF2Q9Y5A9 579 aaKnown RBP9.08□□□□□ -0.96
HLA-DQB1-203ENST00000399082 IGKV2-40A0A087WW87 121 aaPredicted RBP9.07□□□□□ -0.96
HLA-DQB1-203ENST00000399082 A0A1B0GV50 99 aa9.07□□□□□ -0.96
HLA-DQB1-203ENST00000399082 NPIPB6E9PJ23 425 aa9.07□□□□□ -0.96
HLA-DQB1-203ENST00000399082 IGKV2D-40P01614 121 aaPredicted RBP9.07□□□□□ -0.96
HLA-DQB1-203ENST00000399082 RAB5CP51148 216 aa9.07□□□□□ -0.96
HLA-DQB1-203ENST00000399082 CCL20P78556 96 aa9.07□□□□□ -0.96
HLA-DQB1-203ENST00000399082 HIST1H1AQ02539 215 aaPredicted RBP9.07□□□□□ -0.96
HLA-DQB1-203ENST00000399082 EBLN2Q6P2I7 272 aa9.07□□□□□ -0.96
HLA-DQB1-203ENST00000399082 SFT2D1Q8WV19 159 aa9.07□□□□□ -0.96
HLA-DQB1-203ENST00000399082 CSTL1Q9H114 145 aa9.07□□□□□ -0.96
HLA-DQB1-203ENST00000399082 SLC35B3Q9H1N7 401 aa9.07□□□□□ -0.96
HLA-DQB1-203ENST00000399082 AAMDCQ9H7C9 122 aa9.07□□□□□ -0.96
HLA-DQB1-203ENST00000399082 OTORQ9NRC9 128 aa9.07□□□□□ -0.96
HLA-DQB1-203ENST00000399082 TMEM167BQ9NRX6 74 aa9.07□□□□□ -0.96
HLA-DQB1-203ENST00000399082 TGP01266 2768 aa9.06□□□□□ -0.96
HLA-DQB1-203ENST00000399082 PGPA6NDG6 321 aa9.06□□□□□ -0.96
HLA-DQB1-203ENST00000399082 H2AFB1P0C5Y9 115 aa9.06□□□□□ -0.96
HLA-DQB1-203ENST00000399082 APOC4P55056 127 aa9.06□□□□□ -0.96
HLA-DQB1-203ENST00000399082 FXYD7P58549 80 aa9.06□□□□□ -0.96
HLA-DQB1-203ENST00000399082 GNG5P63218 68 aa9.06□□□□□ -0.96
HLA-DQB1-203ENST00000399082 ERCC8Q13216 396 aa9.06□□□□□ -0.96
HLA-DQB1-203ENST00000399082 IQCF2Q8IXL9 164 aa9.06□□□□□ -0.96
HLA-DQB1-203ENST00000399082 OR4B1Q8NGF8 309 aa9.06□□□□□ -0.96
HLA-DQB1-203ENST00000399082 TRAV1-1A0A0B4J248 108 aa9.05□□□□□ -0.96
HLA-DQB1-203ENST00000399082 A0A1W2PRE2 83 aa9.05□□□□□ -0.96
HLA-DQB1-203ENST00000399082 FAM74A7A6NL05 159 aa9.05□□□□□ -0.96
HLA-DQB1-203ENST00000399082 DUSP14O95147 198 aaKnown RBP9.05□□□□□ -0.96
HLA-DQB1-203ENST00000399082 CA1P00915 261 aaPredicted RBP9.05□□□□□ -0.96
HLA-DQB1-203ENST00000399082 UBE2G2P60604 165 aa9.05□□□□□ -0.96
HLA-DQB1-203ENST00000399082 DEFB135Q30KP9 77 aa9.05□□□□□ -0.96
HLA-DQB1-203ENST00000399082 MORN3Q6PF18 240 aaPredicted RBP9.05□□□□□ -0.96
HLA-DQB1-203ENST00000399082 CSNK1G2-AS1Q8NCQ2 148 aa9.05□□□□□ -0.96
HLA-DQB1-203ENST00000399082 VGLL1Q99990 258 aa9.05□□□□□ -0.96
HLA-DQB1-203ENST00000399082 OVOL2Q9BRP0 275 aa9.05□□□□□ -0.96
HLA-DQB1-203ENST00000399082 AGPAT4-IT1Q9H0P7 198 aa9.05□□□□□ -0.96
HLA-DQB1-203ENST00000399082 DIRC3C9JPN6 131 aa9.04□□□□□ -0.96
HLA-DQB1-203ENST00000399082 M0R2Z0 102 aa9.04□□□□□ -0.96
HLA-DQB1-203ENST00000399082 UBE2CO00762 179 aa9.04□□□□□ -0.96
HLA-DQB1-203ENST00000399082 CRXO43186 299 aaPredicted RBP9.04□□□□□ -0.96
HLA-DQB1-203ENST00000399082 CT45A10P0DMU9 189 aa9.04□□□□□ -0.96
HLA-DQB1-203ENST00000399082 KIR3DS1Q14943 382 aa9.04□□□□□ -0.96
HLA-DQB1-203ENST00000399082 Q6ZWC4 215 aa9.04□□□□□ -0.96
HLA-DQB1-203ENST00000399082 OR10J6PQ8NGY7 276 aa9.04□□□□□ -0.96
HLA-DQB1-203ENST00000399082 FAM19A4Q96LR4 140 aa9.04□□□□□ -0.96
HLA-DQB1-203ENST00000399082 XCL2Q9UBD3 114 aa9.04□□□□□ -0.96
HLA-DQB1-203ENST00000399082 ZNF705EA8MWA4 302 aaPredicted RBP9.03□□□□□ -0.96
HLA-DQB1-203ENST00000399082 ATP5G3P48201 142 aa9.03□□□□□ -0.96
HLA-DQB1-203ENST00000399082 SUMO1P63165 101 aaKnown RBP9.03□□□□□ -0.96
HLA-DQB1-203ENST00000399082 SPINK13Q1W4C9 94 aa9.03□□□□□ -0.96
HLA-DQB1-203ENST00000399082 TEX261Q6UWH6 196 aa9.03□□□□□ -0.96
HLA-DQB1-203ENST00000399082 C9orf47Q6ZRZ4 202 aa9.03□□□□□ -0.96
HLA-DQB1-203ENST00000399082 CCDC28AQ8IWP9 274 aa9.03□□□□□ -0.96
HLA-DQB1-203ENST00000399082 C5orf17Q8NAS9 161 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms