RNA–Protein interactions for RNA: ENST00000398587.6

PCDHGA11-201, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA11, Length 4,647 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-201ENST00000398587 SMPXQ9UHP9 88 aa11.37□□□□□ -0.59
PCDHGA11-201ENST00000398587 PRR14LQ5THK1 2151 aa11.37□□□□□ -0.59
PCDHGA11-201ENST00000398587 C1orf194Q5T5A4 169 aa11.36□□□□□ -0.59
PCDHGA11-201ENST00000398587 TMEM14CQ9P0S9 112 aa11.36□□□□□ -0.59
PCDHGA11-201ENST00000398587 TYMSP04818 313 aa11.36□□□□□ -0.59
PCDHGA11-201ENST00000398587 LAGE3Q14657 143 aa11.36□□□□□ -0.59
PCDHGA11-201ENST00000398587 MS4A6AQ9H2W1 248 aa11.36□□□□□ -0.59
PCDHGA11-201ENST00000398587 DPH3P1Q9H4G8 78 aa11.36□□□□□ -0.59
PCDHGA11-201ENST00000398587 JKAMPQ9P055 326 aa11.36□□□□□ -0.59
PCDHGA11-201ENST00000398587 EMP1P54849 157 aa11.36□□□□□ -0.59
PCDHGA11-201ENST00000398587 PCNX3Q9H6A9 2034 aa11.36□□□□□ -0.59
PCDHGA11-201ENST00000398587 VWC2Q2TAL6 325 aa11.36□□□□□ -0.59
PCDHGA11-201ENST00000398587 CSPG4Q6UVK1 2322 aa11.35□□□□□ -0.59
PCDHGA11-201ENST00000398587 C3orf79P0CE67 100 aa11.35□□□□□ -0.59
PCDHGA11-201ENST00000398587 Q0VG73 95 aa11.35□□□□□ -0.59
PCDHGA11-201ENST00000398587 PRR31Q5SQ13 230 aa11.35□□□□□ -0.59
PCDHGA11-201ENST00000398587 FAM231DQ6ZW35 169 aa11.35□□□□□ -0.59
PCDHGA11-201ENST00000398587 ARL6IP6Q8N6S5 226 aa11.35□□□□□ -0.59
PCDHGA11-201ENST00000398587 TRAV12-3A0A0B4J271 114 aa11.35□□□□□ -0.59
PCDHGA11-201ENST00000398587 IGKCP01834 107 aa11.34□□□□□ -0.59
PCDHGA11-201ENST00000398587 FNDC4Q9H6D8 234 aaPredicted RBP11.34□□□□□ -0.59
PCDHGA11-201ENST00000398587 MRPL16Q9NX20 251 aaKnown RBP11.34□□□□□ -0.59
PCDHGA11-201ENST00000398587 IGLC7A0M8Q6 106 aa11.34□□□□□ -0.59
PCDHGA11-201ENST00000398587 H3BRN7 92 aa11.34□□□□□ -0.59
PCDHGA11-201ENST00000398587 NDUFS6O75380 124 aaKnown RBP11.34□□□□□ -0.59
PCDHGA11-201ENST00000398587 ARMS2P0C7Q2 107 aa11.34□□□□□ -0.59
PCDHGA11-201ENST00000398587 COTL1Q14019 142 aa11.34□□□□□ -0.59
PCDHGA11-201ENST00000398587 AMN1Q8IY45 258 aa11.34□□□□□ -0.59
PCDHGA11-201ENST00000398587 KLHL30-AS1Q8NEE0 82 aa11.34□□□□□ -0.59
PCDHGA11-201ENST00000398587 NDUFS7O75251 213 aa11.33□□□□□ -0.6
PCDHGA11-201ENST00000398587 ERCC8Q13216 396 aa11.33□□□□□ -0.6
PCDHGA11-201ENST00000398587 LCNL1Q6ZST4 164 aa11.33□□□□□ -0.6
PCDHGA11-201ENST00000398587 CHTOPQ9Y3Y2 248 aaKnown RBP11.33□□□□□ -0.6
PCDHGA11-201ENST00000398587 IGHV2-5P01817 119 aa11.33□□□□□ -0.6
PCDHGA11-201ENST00000398587 SYNJ2BPP57105 145 aa11.33□□□□□ -0.6
PCDHGA11-201ENST00000398587 Q5PR19 223 aa11.33□□□□□ -0.6
PCDHGA11-201ENST00000398587 LSM4Q9Y4Z0 139 aaKnown RBP11.33□□□□□ -0.6
PCDHGA11-201ENST00000398587 C10orf142B7Z368 130 aa11.33□□□□□ -0.6
PCDHGA11-201ENST00000398587 SAP30O75446 220 aa11.33□□□□□ -0.6
PCDHGA11-201ENST00000398587 NSUN5P1Q3KNT7 163 aa11.32□□□□□ -0.6
PCDHGA11-201ENST00000398587 ZNF114Q8NC26 417 aa11.32□□□□□ -0.6
PCDHGA11-201ENST00000398587 RCHY1Q96PM5 261 aa11.32□□□□□ -0.6
PCDHGA11-201ENST00000398587 MRPS16Q9Y3D3 137 aaKnown RBP11.32□□□□□ -0.6
PCDHGA11-201ENST00000398587 V9GYV3 84 aa11.32□□□□□ -0.6
PCDHGA11-201ENST00000398587 OR11H6Q8NGC7 330 aa11.32□□□□□ -0.6
PCDHGA11-201ENST00000398587 FXYD5Q96DB9 178 aa11.32□□□□□ -0.6
PCDHGA11-201ENST00000398587 TRGV4A0A0C4DH28 118 aa11.32□□□□□ -0.6
PCDHGA11-201ENST00000398587 J3QLI3 93 aa11.32□□□□□ -0.6
PCDHGA11-201ENST00000398587 C14orf178Q8N769 122 aaPredicted RBP11.32□□□□□ -0.6
PCDHGA11-201ENST00000398587 C5orf30Q96GV9 206 aa11.32□□□□□ -0.6
PCDHGA11-201ENST00000398587 WISP2O76076 250 aa11.31□□□□□ -0.6
PCDHGA11-201ENST00000398587 APOMO95445 188 aa11.31□□□□□ -0.6
PCDHGA11-201ENST00000398587 BEX4Q9NWD9 120 aaPredicted RBP11.31□□□□□ -0.6
PCDHGA11-201ENST00000398587 ZNF415Q09FC8 603 aa11.31□□□□□ -0.6
PCDHGA11-201ENST00000398587 SYS1-DBNDD2H3BUS1 97 aa11.31□□□□□ -0.6
PCDHGA11-201ENST00000398587 ATRXP46100 2492 aa11.31□□□□□ -0.6
PCDHGA11-201ENST00000398587 NDUFA4O00483 81 aa11.31□□□□□ -0.6
PCDHGA11-201ENST00000398587 VCYO14598 125 aa11.31□□□□□ -0.6
PCDHGA11-201ENST00000398587 CD28P10747 220 aa11.31□□□□□ -0.6
PCDHGA11-201ENST00000398587 IL17RELQ6ZVW7 336 aa11.31□□□□□ -0.6
PCDHGA11-201ENST00000398587 MAPK1IP1LQ8NDC0 245 aa11.31□□□□□ -0.6
PCDHGA11-201ENST00000398587 TDGF1P3P51864 188 aa11.3□□□□□ -0.6
PCDHGA11-201ENST00000398587 RNF182Q8N6D2 247 aa11.3□□□□□ -0.6
PCDHGA11-201ENST00000398587 ZNF491Q8N8L2 437 aa11.3□□□□□ -0.6
PCDHGA11-201ENST00000398587 TOMM7Q9P0U1 55 aa11.3□□□□□ -0.6
PCDHGA11-201ENST00000398587 MUC22E2RYF6 1773 aaPredicted RBP11.3□□□□□ -0.6
PCDHGA11-201ENST00000398587 ZNF876PQ49A33 203 aa11.3□□□□□ -0.6
PCDHGA11-201ENST00000398587 GTSCR1Q86UQ5 136 aa11.3□□□□□ -0.6
PCDHGA11-201ENST00000398587 OR9G4Q8NGQ1 327 aa11.3□□□□□ -0.6
PCDHGA11-201ENST00000398587 C18orf32Q8TCD1 76 aa11.3□□□□□ -0.6
PCDHGA11-201ENST00000398587 PRR25Q96S07 402 aa11.3□□□□□ -0.6
PCDHGA11-201ENST00000398587 EML6Q6ZMW3 1958 aa11.3□□□□□ -0.6
PCDHGA11-201ENST00000398587 DMRTC2Q8IXT2 367 aaPredicted RBP11.29□□□□□ -0.6
PCDHGA11-201ENST00000398587 SPCS1Q9Y6A9 102 aa11.29□□□□□ -0.6
PCDHGA11-201ENST00000398587 HTN3P15516 51 aa11.29□□□□□ -0.6
PCDHGA11-201ENST00000398587 ORAOV1Q8WV07 137 aa11.29□□□□□ -0.6
PCDHGA11-201ENST00000398587 NHP2Q9NX24 153 aaKnown RBP11.29□□□□□ -0.6
PCDHGA11-201ENST00000398587 A8MWP6 167 aa11.29□□□□□ -0.6
PCDHGA11-201ENST00000398587 C8orf86Q6ZUL3 223 aa11.29□□□□□ -0.6
PCDHGA11-201ENST00000398587 NCOR2Q9Y618 2525 aa11.28□□□□□ -0.6
PCDHGA11-201ENST00000398587 PRSS46E5RG02 174 aa11.28□□□□□ -0.6
PCDHGA11-201ENST00000398587 SMKR1H3BMG3 65 aa11.28□□□□□ -0.6
PCDHGA11-201ENST00000398587 HSD52Q0P140 79 aa11.28□□□□□ -0.6
PCDHGA11-201ENST00000398587 OR2K2Q8NGT1 345 aa11.28□□□□□ -0.6
PCDHGA11-201ENST00000398587 SEC11AP67812 179 aa11.28□□□□□ -0.6
PCDHGA11-201ENST00000398587 MSMPQ1L6U9 139 aa11.28□□□□□ -0.6
PCDHGA11-201ENST00000398587 OR13C6PQ8NH95 151 aa11.28□□□□□ -0.6
PCDHGA11-201ENST00000398587 ZNF815PA8K554 130 aa11.28□□□□□ -0.6
PCDHGA11-201ENST00000398587 H3BUT2 72 aa11.28□□□□□ -0.6
PCDHGA11-201ENST00000398587 TMEM158Q8WZ71 300 aa11.28□□□□□ -0.6
PCDHGA11-201ENST00000398587 C8orf49Q96NF6 230 aa11.28□□□□□ -0.6
PCDHGA11-201ENST00000398587 DEFB131AP59861 70 aa11.28□□□□□ -0.6
PCDHGA11-201ENST00000398587 CR1LQ2VPA4 569 aa11.28□□□□□ -0.6
PCDHGA11-201ENST00000398587 CD300EQ496F6 205 aaPredicted RBP11.28□□□□□ -0.6
PCDHGA11-201ENST00000398587 FAM104BQ5XKR9 115 aa11.28□□□□□ -0.6
PCDHGA11-201ENST00000398587 TMEM213A2RRL7 107 aa11.27□□□□□ -0.6
PCDHGA11-201ENST00000398587 DNAL4O96015 105 aa11.27□□□□□ -0.6
PCDHGA11-201ENST00000398587 INSP01308 110 aa11.27□□□□□ -0.6
PCDHGA11-201ENST00000398587 HOXB4P17483 251 aaPredicted RBP11.27□□□□□ -0.6
PCDHGA11-201ENST00000398587 DMRTA1Q5VZB9 504 aa11.27□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms