RNA–Protein interactions for RNA: ENST00000398316.7

FNDC3A-202, Transcript of fibronectin type III domain containing 3A, humanhuman

TSL 1 (best) BASIC

Gene FNDC3A, Length 5,714 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3A-202ENST00000398316 Q6ZRG5 221 aa2.86□□□□□ -1.95
FNDC3A-202ENST00000398316 H2BFWTQ7Z2G1 175 aa2.86□□□□□ -1.95
FNDC3A-202ENST00000398316 WFDC9Q8NEX5 89 aa2.86□□□□□ -1.95
FNDC3A-202ENST00000398316 OR52B4Q8NGK2 314 aa2.86□□□□□ -1.95
FNDC3A-202ENST00000398316 ORAOV1Q8WV07 137 aa2.86□□□□□ -1.95
FNDC3A-202ENST00000398316 SEC11CQ9BY50 192 aa2.86□□□□□ -1.95
FNDC3A-202ENST00000398316 RABAC1Q9UI14 185 aa2.86□□□□□ -1.95
FNDC3A-202ENST00000398316 OR51B2Q9Y5P1 312 aa2.86□□□□□ -1.95
FNDC3A-202ENST00000398316 FLNCQ14315 2725 aa2.86□□□□□ -1.95
FNDC3A-202ENST00000398316 TRAV30A0A087WSZ9 112 aa2.86□□□□□ -1.95
FNDC3A-202ENST00000398316 IGHV7-81A0A0B4J1V7 117 aa2.86□□□□□ -1.95
FNDC3A-202ENST00000398316 LYNX1G3V0Z9 82 aa2.86□□□□□ -1.95
FNDC3A-202ENST00000398316 PPP1R17O96001 155 aa2.86□□□□□ -1.95
FNDC3A-202ENST00000398316 LYNX1P0DP58 116 aa2.86□□□□□ -1.95
FNDC3A-202ENST00000398316 G6PCP35575 357 aa2.86□□□□□ -1.95
FNDC3A-202ENST00000398316 FXYD4P59646 89 aa2.86□□□□□ -1.95
FNDC3A-202ENST00000398316 HSPE1P61604 102 aaKnown RBP2.86□□□□□ -1.95
FNDC3A-202ENST00000398316 UTF1Q5T230 341 aa2.86□□□□□ -1.95
FNDC3A-202ENST00000398316 OR4X1Q8NH49 305 aa2.86□□□□□ -1.95
FNDC3A-202ENST00000398316 FAM19A4Q96LR4 140 aa2.86□□□□□ -1.95
FNDC3A-202ENST00000398316 ODF3Q96PU9 254 aa2.86□□□□□ -1.95
FNDC3A-202ENST00000398316 EHFQ9NZC4 300 aa2.86□□□□□ -1.95
FNDC3A-202ENST00000398316 TEX15Q9BXT5 2789 aa2.86□□□□□ -1.95
FNDC3A-202ENST00000398316 TRBV20-1A0A075B6N2 111 aa2.86□□□□□ -1.95
FNDC3A-202ENST00000398316 IGHV3OR15-7A0A075B7D8 119 aa2.86□□□□□ -1.95
FNDC3A-202ENST00000398316 TRAV25A0A0B4J276 109 aa2.86□□□□□ -1.95
FNDC3A-202ENST00000398316 TRGC1P0CF51 173 aa2.86□□□□□ -1.95
FNDC3A-202ENST00000398316 RNASE2P10153 161 aaKnown RBP2.86□□□□□ -1.95
FNDC3A-202ENST00000398316 HOXD3P31249 432 aaPredicted RBP2.86□□□□□ -1.95
FNDC3A-202ENST00000398316 RPL32P62910 135 aaKnown RBP2.86□□□□□ -1.95
FNDC3A-202ENST00000398316 ATP5G2Q06055 141 aa2.86□□□□□ -1.95
FNDC3A-202ENST00000398316 C1orf194Q5T5A4 169 aa2.86□□□□□ -1.95
FNDC3A-202ENST00000398316 IL34Q6ZMJ4 242 aa2.86□□□□□ -1.95
FNDC3A-202ENST00000398316 ZCCHC24Q8N2G6 241 aaKnown RBP2.86□□□□□ -1.95
FNDC3A-202ENST00000398316 UBALD1Q8TB05 177 aa2.86□□□□□ -1.95
FNDC3A-202ENST00000398316 ZNF747Q9BV97 191 aa2.86□□□□□ -1.95
FNDC3A-202ENST00000398316 TRAPPC1Q9Y5R8 145 aa2.86□□□□□ -1.95
FNDC3A-202ENST00000398316 UTP20O75691 2785 aaKnown RBP2.86□□□□□ -1.95
FNDC3A-202ENST00000398316 HEATR1Q9H583 2144 aaKnown RBP2.86□□□□□ -1.95
FNDC3A-202ENST00000398316 A0A1B0GWB2 263 aa2.86□□□□□ -1.95
FNDC3A-202ENST00000398316 SRRM4A7MD48 611 aaKnown RBP2.86□□□□□ -1.95
FNDC3A-202ENST00000398316 C15orf62A8K5M9 175 aa2.86□□□□□ -1.95
FNDC3A-202ENST00000398316 NPIPB6E9PJ23 425 aa2.86□□□□□ -1.95
FNDC3A-202ENST00000398316 F8WEM9 126 aa2.86□□□□□ -1.95
FNDC3A-202ENST00000398316 H3BUT2 72 aa2.86□□□□□ -1.95
FNDC3A-202ENST00000398316 HTN1P15515 57 aa2.86□□□□□ -1.95
FNDC3A-202ENST00000398316 CXCL3P19876 107 aa2.86□□□□□ -1.95
FNDC3A-202ENST00000398316 PROK1P58294 105 aa2.86□□□□□ -1.95
FNDC3A-202ENST00000398316 GAGE2BQ13066 116 aa2.86□□□□□ -1.95
FNDC3A-202ENST00000398316 GAGE2EQ4V326 116 aa2.86□□□□□ -1.95
FNDC3A-202ENST00000398316 C9orf66Q5T8R8 295 aa2.86□□□□□ -1.95
FNDC3A-202ENST00000398316 STPG3Q8N7X2 389 aa2.86□□□□□ -1.95
FNDC3A-202ENST00000398316 OR1B1Q8NGR6 318 aa2.86□□□□□ -1.95
FNDC3A-202ENST00000398316 SPACA5Q96QH8 159 aa2.86□□□□□ -1.95
FNDC3A-202ENST00000398316 GAGE2DQ9UEU5 116 aa2.86□□□□□ -1.95
FNDC3A-202ENST00000398316 FUT9Q9Y231 359 aa2.86□□□□□ -1.95
FNDC3A-202ENST00000398316 SPCS1Q9Y6A9 102 aa2.86□□□□□ -1.95
FNDC3A-202ENST00000398316 BOD1L1Q8NFC6 3051 aa2.86□□□□□ -1.95
FNDC3A-202ENST00000398316 MPC2O95563 127 aa2.86□□□□□ -1.95
FNDC3A-202ENST00000398316 C11orf87Q6NUJ2 197 aa2.86□□□□□ -1.95
FNDC3A-202ENST00000398316 OR5AU1Q8NGC0 362 aa2.86□□□□□ -1.95
FNDC3A-202ENST00000398316 EEF1AKMT3Q96AZ1 226 aa2.86□□□□□ -1.95
FNDC3A-202ENST00000398316 CYYR1Q96J86 154 aa2.86□□□□□ -1.95
FNDC3A-202ENST00000398316 FANCD2OSQ96PS1 177 aa2.86□□□□□ -1.95
FNDC3A-202ENST00000398316 HSPB9Q9BQS6 159 aa2.86□□□□□ -1.95
FNDC3A-202ENST00000398316 TXNDC17Q9BRA2 123 aa2.86□□□□□ -1.95
FNDC3A-202ENST00000398316 MRPL16Q9NX20 251 aaKnown RBP2.86□□□□□ -1.95
FNDC3A-202ENST00000398316 PRKDCP78527 4128 aaKnown RBP2.85□□□□□ -1.95
FNDC3A-202ENST00000398316 IGKV1D-37A0A075B6S9 117 aa2.85□□□□□ -1.95
FNDC3A-202ENST00000398316 TEX50A0A1B0GTY4 177 aa2.85□□□□□ -1.95
FNDC3A-202ENST00000398316 GAGE12JA6NER3 117 aa2.85□□□□□ -1.95
FNDC3A-202ENST00000398316 M0QYG6 137 aa2.85□□□□□ -1.95
FNDC3A-202ENST00000398316 GAGE7O76087 117 aa2.85□□□□□ -1.95
FNDC3A-202ENST00000398316 GAGE12FP0CL80 117 aa2.85□□□□□ -1.95
FNDC3A-202ENST00000398316 GAGE12GP0CL81 117 aa2.85□□□□□ -1.95
FNDC3A-202ENST00000398316 GAGE12IP0CL82 117 aa2.85□□□□□ -1.95
FNDC3A-202ENST00000398316 GAGE4Q13068 117 aa2.85□□□□□ -1.95
FNDC3A-202ENST00000398316 SRSF9Q13242 221 aaKnown RBP eCLIP2.85□□□□□ -1.95
FNDC3A-202ENST00000398316 SPSB3Q6PJ21 355 aa2.85□□□□□ -1.95
FNDC3A-202ENST00000398316 SFTA2Q6UW10 78 aa2.85□□□□□ -1.95
FNDC3A-202ENST00000398316 MRPL55Q7Z7F7 128 aaKnown RBP2.85□□□□□ -1.95
FNDC3A-202ENST00000398316 GPHB5Q86YW7 130 aa2.85□□□□□ -1.95
FNDC3A-202ENST00000398316 ZNF502Q8TBZ5 544 aa2.85□□□□□ -1.95
FNDC3A-202ENST00000398316 GPR146Q96CH1 333 aa2.85□□□□□ -1.95
FNDC3A-202ENST00000398316 TVP23CQ96ET8 276 aa2.85□□□□□ -1.95
FNDC3A-202ENST00000398316 CCL28Q9NRJ3 127 aa2.85□□□□□ -1.95
FNDC3A-202ENST00000398316 TRBV7-1A0A0A6YYK4 115 aa2.85□□□□□ -1.95
FNDC3A-202ENST00000398316 ZFP92A6NM28 416 aa2.85□□□□□ -1.95
FNDC3A-202ENST00000398316 BCL2L11O43521 198 aa2.85□□□□□ -1.95
FNDC3A-202ENST00000398316 TRGV3P03979 118 aa2.85□□□□□ -1.95
FNDC3A-202ENST00000398316 TSPOP30536 169 aa2.85□□□□□ -1.95
FNDC3A-202ENST00000398316 EGFEM1PQ0D2K5 195 aa2.85□□□□□ -1.95
FNDC3A-202ENST00000398316 FAM90A2PQ658T7 463 aa2.85□□□□□ -1.95
FNDC3A-202ENST00000398316 TREML4Q6UXN2 200 aa2.85□□□□□ -1.95
FNDC3A-202ENST00000398316 Q6ZRM9 215 aa2.85□□□□□ -1.95
FNDC3A-202ENST00000398316 IL17RELQ6ZVW7 336 aa2.85□□□□□ -1.95
FNDC3A-202ENST00000398316 FGFRL1Q8N441 504 aa2.85□□□□□ -1.95
FNDC3A-202ENST00000398316 FER1L6-AS1Q8NA97 138 aa2.85□□□□□ -1.95
FNDC3A-202ENST00000398316 TMEM101Q96IK0 257 aa2.85□□□□□ -1.95
FNDC3A-202ENST00000398316 MRPL20Q9BYC9 149 aaKnown RBP2.85□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms