RNA–Protein interactions for RNA: ENST00000398145.6

HPS4-202, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS4, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-202ENST00000398145 SCGB1A1P11684 91 aa8.88□□□□□ -0.99
HPS4-202ENST00000398145 UCNP55089 124 aa8.88□□□□□ -0.99
HPS4-202ENST00000398145 GAGE2BQ13066 116 aa8.88□□□□□ -0.99
HPS4-202ENST00000398145 ETDBQ3ZM63 59 aa8.88□□□□□ -0.99
HPS4-202ENST00000398145 GAGE2EQ4V326 116 aa8.88□□□□□ -0.99
HPS4-202ENST00000398145 IGFL4Q6B9Z1 124 aa8.88□□□□□ -0.99
HPS4-202ENST00000398145 SIGLEC8Q9NYZ4 499 aa8.88□□□□□ -0.99
HPS4-202ENST00000398145 GAGE2DQ9UEU5 116 aa8.88□□□□□ -0.99
HPS4-202ENST00000398145 ERG28Q9UKR5 140 aa8.88□□□□□ -0.99
HPS4-202ENST00000398145 PCNX2A6NKB5 2137 aa8.88□□□□□ -0.99
HPS4-202ENST00000398145 ODF3L1Q8IXM7 274 aa8.88□□□□□ -0.99
HPS4-202ENST00000398145 C11orf53Q8IXP5 236 aa8.88□□□□□ -0.99
HPS4-202ENST00000398145 ZNF747Q9BV97 191 aa8.88□□□□□ -0.99
HPS4-202ENST00000398145 EML6Q6ZMW3 1958 aa8.88□□□□□ -0.99
HPS4-202ENST00000398145 TMEM8BA6NDV4 472 aa8.88□□□□□ -0.99
HPS4-202ENST00000398145 IGHV3-11P01762 117 aa8.88□□□□□ -0.99
HPS4-202ENST00000398145 MRPL51Q4U2R6 128 aaKnown RBP8.88□□□□□ -0.99
HPS4-202ENST00000398145 THAP8Q8NA92 274 aa8.88□□□□□ -0.99
HPS4-202ENST00000398145 A0A1W2PPM0 123 aa8.87□□□□□ -0.99
HPS4-202ENST00000398145 OVOL1O14753 267 aa8.87□□□□□ -0.99
HPS4-202ENST00000398145 NPFFO15130 113 aa8.87□□□□□ -0.99
HPS4-202ENST00000398145 IGLV2-14P01704 120 aa8.87□□□□□ -0.99
HPS4-202ENST00000398145 PRSS57Q6UWY2 283 aa8.87□□□□□ -0.99
HPS4-202ENST00000398145 TMEM14CQ9P0S9 112 aa8.87□□□□□ -0.99
HPS4-202ENST00000398145 PSMB11A5LHX3 300 aa8.87□□□□□ -0.99
HPS4-202ENST00000398145 PAX8Q06710 450 aa8.87□□□□□ -0.99
HPS4-202ENST00000398145 ZNF672Q499Z4 452 aaPredicted RBP8.87□□□□□ -0.99
HPS4-202ENST00000398145 CRIP3Q6Q6R5 217 aa8.87□□□□□ -0.99
HPS4-202ENST00000398145 IGLV1-44P01699 117 aa8.87□□□□□ -0.99
HPS4-202ENST00000398145 IGHV4-39P01824 125 aa8.87□□□□□ -0.99
HPS4-202ENST00000398145 ZFAND6Q6FIF0 208 aa8.87□□□□□ -0.99
HPS4-202ENST00000398145 UTRNP46939 3433 aa8.86□□□□□ -0.99
HPS4-202ENST00000398145 TMEM155Q4W5P6 130 aa8.86□□□□□ -0.99
HPS4-202ENST00000398145 SIGLEC15Q6ZMC9 328 aa8.86□□□□□ -0.99
HPS4-202ENST00000398145 RAX2Q96IS3 184 aa8.86□□□□□ -0.99
HPS4-202ENST00000398145 DPH3P1Q9H4G8 78 aa8.86□□□□□ -0.99
HPS4-202ENST00000398145 LTAP01374 205 aa8.86□□□□□ -0.99
HPS4-202ENST00000398145 FRMD6-AS1P0C7T7 363 aa8.86□□□□□ -0.99
HPS4-202ENST00000398145 Q6ZPA2 131 aa8.86□□□□□ -0.99
HPS4-202ENST00000398145 ZC2HC1AQ96GY0 325 aa8.86□□□□□ -0.99
HPS4-202ENST00000398145 UBE2L6O14933 153 aa8.86□□□□□ -0.99
HPS4-202ENST00000398145 KLRB1Q12918 225 aa8.86□□□□□ -0.99
HPS4-202ENST00000398145 Q8TCH9 128 aa8.86□□□□□ -0.99
HPS4-202ENST00000398145 C8orf49Q96NF6 230 aa8.86□□□□□ -0.99
HPS4-202ENST00000398145 OOSP1A8MZH6 123 aa8.86□□□□□ -0.99
HPS4-202ENST00000398145 SPINK8P0C7L1 97 aa8.86□□□□□ -0.99
HPS4-202ENST00000398145 RNF182Q8N6D2 247 aa8.86□□□□□ -0.99
HPS4-202ENST00000398145 TSSC4Q9Y5U2 329 aaPredicted RBP8.86□□□□□ -0.99
HPS4-202ENST00000398145 PRR14LQ5THK1 2151 aa8.85□□□□□ -0.99
HPS4-202ENST00000398145 IGHV3OR16-12A0A075B7B8 117 aa8.85□□□□□ -0.99
HPS4-202ENST00000398145 SIVA1O15304 175 aa8.85□□□□□ -0.99
HPS4-202ENST00000398145 C14orf178Q8N769 122 aaPredicted RBP8.85□□□□□ -0.99
HPS4-202ENST00000398145 ZGRF1Q86YA3 2104 aa8.85□□□□□ -0.99
HPS4-202ENST00000398145 F8W1H4 67 aa8.85□□□□□ -0.99
HPS4-202ENST00000398145 IGLC1P0CG04 106 aa8.85□□□□□ -0.99
HPS4-202ENST00000398145 C9orf139Q6ZV77 190 aa8.85□□□□□ -0.99
HPS4-202ENST00000398145 LINC00311Q8N616 119 aa8.85□□□□□ -0.99
HPS4-202ENST00000398145 PRR25Q96S07 402 aa8.85□□□□□ -0.99
HPS4-202ENST00000398145 TPSG1Q9NRR2 321 aa8.85□□□□□ -0.99
HPS4-202ENST00000398145 OBSL1O75147 1896 aa8.85□□□□□ -0.99
HPS4-202ENST00000398145 WDR87Q6ZQQ6 2873 aa8.84□□□□□ -0.99
HPS4-202ENST00000398145 TMEM238C9JI98 176 aa8.84□□□□□ -0.99
HPS4-202ENST00000398145 PRTN3P24158 256 aa8.84□□□□□ -0.99
HPS4-202ENST00000398145 CNTFRP26992 372 aa8.84□□□□□ -0.99
HPS4-202ENST00000398145 ZNF295-AS1Q8N0V1 137 aa8.84□□□□□ -0.99
HPS4-202ENST00000398145 KLRD1Q13241 179 aa8.84□□□□□ -0.99
HPS4-202ENST00000398145 VMO1Q7Z5L0 202 aa8.84□□□□□ -0.99
HPS4-202ENST00000398145 KIAA1549LQ6ZVL6 1849 aa8.84□□□□□ -0.99
HPS4-202ENST00000398145 KMT2EQ8IZD2 1858 aa8.84□□□□□ -0.99
HPS4-202ENST00000398145 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.84□□□□□ -0.99
HPS4-202ENST00000398145 NPYP01303 97 aa8.84□□□□□ -0.99
HPS4-202ENST00000398145 PCDH15Q96QU1 1955 aa8.84□□□□□ -0.99
HPS4-202ENST00000398145 IGLV3-9A0A075B6K5 115 aa8.84□□□□□ -1
HPS4-202ENST00000398145 SSBP2P81877 361 aaPredicted RBP8.84□□□□□ -1
HPS4-202ENST00000398145 LINC00173Q6ZV60 143 aa8.84□□□□□ -1
HPS4-202ENST00000398145 Q8N8P6 123 aa8.84□□□□□ -1
HPS4-202ENST00000398145 DUX5Q96PT3 197 aa8.84□□□□□ -1
HPS4-202ENST00000398145 MED12LQ86YW9 2145 aa8.83□□□□□ -1
HPS4-202ENST00000398145 TRAV8-4A0A0B4J246 113 aa8.83□□□□□ -1
HPS4-202ENST00000398145 ERCC8Q13216 396 aa8.83□□□□□ -1
HPS4-202ENST00000398145 LINC00477Q96M19 166 aa8.83□□□□□ -1
HPS4-202ENST00000398145 PIMREGQ9BSJ6 248 aa8.83□□□□□ -1
HPS4-202ENST00000398145 CSTL1Q9H114 145 aa8.83□□□□□ -1
HPS4-202ENST00000398145 K7EM74 188 aa8.83□□□□□ -1
HPS4-202ENST00000398145 VCYO14598 125 aa8.83□□□□□ -1
HPS4-202ENST00000398145 MINOS1Q5TGZ0 78 aa8.83□□□□□ -1
HPS4-202ENST00000398145 IGF2BP2-AS1Q96M15 143 aa8.83□□□□□ -1
HPS4-202ENST00000398145 VGLL1Q99990 258 aa8.83□□□□□ -1
HPS4-202ENST00000398145 MINOS1-NBL1R4GNA1 71 aa8.83□□□□□ -1
HPS4-202ENST00000398145 IGHV3-64A0A075B6Q5 118 aa8.83□□□□□ -1
HPS4-202ENST00000398145 MORN5Q5VZ52 161 aa8.83□□□□□ -1
HPS4-202ENST00000398145 TEX36Q5VZQ5 186 aa8.83□□□□□ -1
HPS4-202ENST00000398145 NPFFR1Q9GZQ6 430 aa8.83□□□□□ -1
HPS4-202ENST00000398145 KIF26AQ9ULI4 1882 aaPredicted RBP8.82□□□□□ -1
HPS4-202ENST00000398145 NDUFS7O75251 213 aa8.82□□□□□ -1
HPS4-202ENST00000398145 FAM120AOSQ5T036 256 aa8.82□□□□□ -1
HPS4-202ENST00000398145 LCNL1Q6ZST4 164 aa8.82□□□□□ -1
HPS4-202ENST00000398145 MRPL35Q9NZE8 188 aaKnown RBP8.82□□□□□ -1
HPS4-202ENST00000398145 LOXP28300 417 aaPredicted RBP8.82□□□□□ -1
HPS4-202ENST00000398145 LINC01545Q5VT33 79 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 92.5 ms