RNA–Protein interactions for RNA: ENST00000397901.7

CHMP1A-201, Transcript of charged multivesicular body protein 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP1A, Length 2,483 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-201ENST00000397901 ASCL5Q7RTU5 278 aa12.65□□□□□ -0.38
CHMP1A-201ENST00000397901 PHLDA1Q8WV24 401 aaPredicted RBP12.65□□□□□ -0.38
CHMP1A-201ENST00000397901 HIGD1BQ9P298 99 aa12.65□□□□□ -0.38
CHMP1A-201ENST00000397901 NPIPB6E9PJ23 425 aa12.64□□□□□ -0.39
CHMP1A-201ENST00000397901 GOLT1AQ6ZVE7 132 aa12.64□□□□□ -0.39
CHMP1A-201ENST00000397901 Q86TA4 180 aa12.64□□□□□ -0.39
CHMP1A-201ENST00000397901 C8orf46Q8TAG6 207 aa12.64□□□□□ -0.39
CHMP1A-201ENST00000397901 C18orf15Q96N68 181 aa12.64□□□□□ -0.39
CHMP1A-201ENST00000397901 HIGD1AQ9Y241 93 aa12.64□□□□□ -0.39
CHMP1A-201ENST00000397901 A0A096LNJ9 63 aa12.64□□□□□ -0.39
CHMP1A-201ENST00000397901 TSPAN13O95857 204 aa12.64□□□□□ -0.39
CHMP1A-201ENST00000397901 E9PLD3 99 aa12.63□□□□□ -0.39
CHMP1A-201ENST00000397901 IGHV1-8P0DP01 117 aa12.63□□□□□ -0.39
CHMP1A-201ENST00000397901 DLX6P56179 175 aa12.63□□□□□ -0.39
CHMP1A-201ENST00000397901 ETDBQ3ZM63 59 aa12.63□□□□□ -0.39
CHMP1A-201ENST00000397901 SH2D6Q7Z4S9 175 aa12.63□□□□□ -0.39
CHMP1A-201ENST00000397901 ZNF418Q8TF45 676 aaPredicted RBP12.63□□□□□ -0.39
CHMP1A-201ENST00000397901 GATD1Q8NB37 220 aa12.63□□□□□ -0.39
CHMP1A-201ENST00000397901 ZNF414Q96IQ9 312 aa12.63□□□□□ -0.39
CHMP1A-201ENST00000397901 TPRP12270 2363 aaKnown RBP12.62□□□□□ -0.39
CHMP1A-201ENST00000397901 A0A1B0GUT8 65 aa12.62□□□□□ -0.39
CHMP1A-201ENST00000397901 OR11H12B2RN74 326 aa12.62□□□□□ -0.39
CHMP1A-201ENST00000397901 RIGQ13278 110 aa12.62□□□□□ -0.39
CHMP1A-201ENST00000397901 TMEM155Q4W5P6 130 aa12.62□□□□□ -0.39
CHMP1A-201ENST00000397901 PSMG4Q5JS54 123 aa12.62□□□□□ -0.39
CHMP1A-201ENST00000397901 C8orf31Q8N9H6 132 aa12.62□□□□□ -0.39
CHMP1A-201ENST00000397901 Q8NA96 180 aa12.62□□□□□ -0.39
CHMP1A-201ENST00000397901 OR11H1Q8NG94 326 aa12.62□□□□□ -0.39
CHMP1A-201ENST00000397901 OR11H2Q8NH07 326 aa12.62□□□□□ -0.39
CHMP1A-201ENST00000397901 ZNF502Q8TBZ5 544 aa12.62□□□□□ -0.39
CHMP1A-201ENST00000397901 ARPC1AQ92747 370 aa12.62□□□□□ -0.39
CHMP1A-201ENST00000397901 A0A0G2JNJ9 132 aa12.62□□□□□ -0.39
CHMP1A-201ENST00000397901 C16orf97H3BN30 126 aa12.62□□□□□ -0.39
CHMP1A-201ENST00000397901 K7ERJ3 54 aa12.62□□□□□ -0.39
CHMP1A-201ENST00000397901 TTC9CQ8N5M4 171 aa12.62□□□□□ -0.39
CHMP1A-201ENST00000397901 PIFOQ8TCI5 191 aa12.62□□□□□ -0.39
CHMP1A-201ENST00000397901 OTORQ9NRC9 128 aa12.62□□□□□ -0.39
CHMP1A-201ENST00000397901 Q9UFV3 132 aa12.62□□□□□ -0.39
CHMP1A-201ENST00000397901 MALRD1Q5VYJ5 2156 aa12.61□□□□□ -0.39
CHMP1A-201ENST00000397901 APC2O95996 2303 aa12.61□□□□□ -0.39
CHMP1A-201ENST00000397901 IFI27P40305 119 aaPredicted RBP12.61□□□□□ -0.39
CHMP1A-201ENST00000397901 ATP5G2Q06055 141 aa12.61□□□□□ -0.39
CHMP1A-201ENST00000397901 PVRIGQ6DKI7 326 aa12.61□□□□□ -0.39
CHMP1A-201ENST00000397901 SLC25A39Q9BZJ4 359 aaPredicted RBP12.61□□□□□ -0.39
CHMP1A-201ENST00000397901 TMEM133Q9H2Q1 129 aa12.61□□□□□ -0.39
CHMP1A-201ENST00000397901 SIGLEC9Q9Y336 463 aa12.61□□□□□ -0.39
CHMP1A-201ENST00000397901 A0A1B0GW15 77 aa12.61□□□□□ -0.39
CHMP1A-201ENST00000397901 TNFRSF13BO14836 293 aaPredicted RBP12.61□□□□□ -0.39
CHMP1A-201ENST00000397901 IGLV2-11P01706 119 aa12.61□□□□□ -0.39
CHMP1A-201ENST00000397901 RBP4P02753 201 aa12.61□□□□□ -0.39
CHMP1A-201ENST00000397901 FAM106CPP0CH98 169 aa12.61□□□□□ -0.39
CHMP1A-201ENST00000397901 FAM106AQ4KMX7 169 aa12.61□□□□□ -0.39
CHMP1A-201ENST00000397901 THBDP07204 575 aa12.6□□□□□ -0.39
CHMP1A-201ENST00000397901 SRSF12Q8WXF0 261 aaKnown RBP12.6□□□□□ -0.39
CHMP1A-201ENST00000397901 CYSLTR1Q9Y271 337 aa12.6□□□□□ -0.39
CHMP1A-201ENST00000397901 ZZEF1O43149 2961 aa12.6□□□□□ -0.39
CHMP1A-201ENST00000397901 ACACAQ13085 2346 aa12.6□□□□□ -0.39
CHMP1A-201ENST00000397901 IGLL5B9A064 214 aa12.6□□□□□ -0.39
CHMP1A-201ENST00000397901 PRRG2O14669 202 aa12.6□□□□□ -0.39
CHMP1A-201ENST00000397901 ARMS2P0C7Q2 107 aa12.6□□□□□ -0.39
CHMP1A-201ENST00000397901 LOXL1Q08397 574 aaPredicted RBP12.6□□□□□ -0.39
CHMP1A-201ENST00000397901 GAGE13Q4V321 117 aa12.6□□□□□ -0.39
CHMP1A-201ENST00000397901 C8orf86Q6ZUL3 223 aa12.6□□□□□ -0.39
CHMP1A-201ENST00000397901 C17orf77Q96MU5 243 aa12.6□□□□□ -0.39
CHMP1A-201ENST00000397901 CHAC1Q9BUX1 264 aa12.6□□□□□ -0.39
CHMP1A-201ENST00000397901 FBXL15Q9H469 300 aa12.6□□□□□ -0.39
CHMP1A-201ENST00000397901 NHP2Q9NX24 153 aaKnown RBP12.6□□□□□ -0.39
CHMP1A-201ENST00000397901 ZGRF1Q86YA3 2104 aa12.59□□□□□ -0.39
CHMP1A-201ENST00000397901 PIEZO2Q9H5I5 2752 aa12.59□□□□□ -0.39
CHMP1A-201ENST00000397901 SPTBN2O15020 2390 aa12.59□□□□□ -0.39
CHMP1A-201ENST00000397901 TEX22C9J3V5 150 aa12.59□□□□□ -0.39
CHMP1A-201ENST00000397901 OVOL3O00110 214 aa12.59□□□□□ -0.39
CHMP1A-201ENST00000397901 TPPP3Q9BW30 176 aa12.59□□□□□ -0.39
CHMP1A-201ENST00000397901 TM2D2Q9BX73 214 aa12.59□□□□□ -0.39
CHMP1A-201ENST00000397901 DYNLRB1Q9NP97 96 aa12.59□□□□□ -0.39
CHMP1A-201ENST00000397901 TACC2O95359 2948 aa12.59□□□□□ -0.39
CHMP1A-201ENST00000397901 PTPRZ1P23471 2315 aaPredicted RBP12.59□□□□□ -0.39
CHMP1A-201ENST00000397901 H3BMG7 143 aa12.59□□□□□ -0.39
CHMP1A-201ENST00000397901 CRYGBP07316 175 aa12.59□□□□□ -0.39
CHMP1A-201ENST00000397901 TMEM95Q3KNT9 176 aa12.59□□□□□ -0.39
CHMP1A-201ENST00000397901 IFI27L1Q96BM0 104 aa12.59□□□□□ -0.39
CHMP1A-201ENST00000397901 ZNF479Q96JC4 524 aa12.59□□□□□ -0.39
CHMP1A-201ENST00000397901 ZNF785A8K8V0 405 aa12.58□□□□□ -0.4
CHMP1A-201ENST00000397901 HBDP02042 147 aa12.58□□□□□ -0.4
CHMP1A-201ENST00000397901 FOXC1Q12948 553 aa12.58□□□□□ -0.4
CHMP1A-201ENST00000397901 PPP1R27Q86WC6 154 aa12.58□□□□□ -0.4
CHMP1A-201ENST00000397901 CEND1Q8N111 149 aa12.58□□□□□ -0.4
CHMP1A-201ENST00000397901 RASL11BQ9BPW5 248 aa12.58□□□□□ -0.4
CHMP1A-201ENST00000397901 COX7A1P24310 79 aa12.57□□□□□ -0.4
CHMP1A-201ENST00000397901 RNASE6Q93091 150 aaKnown RBP12.57□□□□□ -0.4
CHMP1A-201ENST00000397901 CEP295Q9C0D2 2601 aa12.57□□□□□ -0.4
CHMP1A-201ENST00000397901 IGHV1-3A0A0C4DH29 117 aa12.57□□□□□ -0.4
CHMP1A-201ENST00000397901 LOC389332A0A1B0GUA5 103 aa12.56□□□□□ -0.4
CHMP1A-201ENST00000397901 SPINK8P0C7L1 97 aa12.56□□□□□ -0.4
CHMP1A-201ENST00000397901 INSL3P51460 131 aa12.56□□□□□ -0.4
CHMP1A-201ENST00000397901 PLGLAQ15195 96 aa12.56□□□□□ -0.4
CHMP1A-201ENST00000397901 PRO0461Q9UI25 63 aa12.56□□□□□ -0.4
CHMP1A-201ENST00000397901 SRSF1Q07955 248 aaKnown RBP eCLIP12.56□□□□□ -0.4
CHMP1A-201ENST00000397901 KLRD1Q13241 179 aa12.56□□□□□ -0.4
CHMP1A-201ENST00000397901 GFRALQ6UXV0 394 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms