RNA–Protein interactions for RNA: ENST00000397408.5

TSPAN4-206, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-206ENST00000397408 PRAC2D3DTV9 90 aa15.42■□□□□ 0.06
TSPAN4-206ENST00000397408 MBP02144 154 aa15.42■□□□□ 0.06
TSPAN4-206ENST00000397408 CDC34P49427 236 aaPredicted RBP15.42■□□□□ 0.06
TSPAN4-206ENST00000397408 TCTE3Q8IZS6 198 aa15.42■□□□□ 0.06
TSPAN4-206ENST00000397408 PHYHIPLQ96FC7 376 aa15.42■□□□□ 0.06
TSPAN4-206ENST00000397408 M0R3E3 92 aa15.41■□□□□ 0.06
TSPAN4-206ENST00000397408 HMGB3O15347 200 aaKnown RBP15.41■□□□□ 0.06
TSPAN4-206ENST00000397408 EXOC3-AS1Q8N2X6 119 aa15.41■□□□□ 0.06
TSPAN4-206ENST00000397408 RPP25LQ8N5L8 163 aaKnown RBP15.41■□□□□ 0.06
TSPAN4-206ENST00000397408 MRPL53Q96EL3 112 aaKnown RBP15.41■□□□□ 0.06
TSPAN4-206ENST00000397408 AAMDCQ9H7C9 122 aa15.41■□□□□ 0.06
TSPAN4-206ENST00000397408 DNAH7Q8WXX0 4024 aa15.4■□□□□ 0.06
TSPAN4-206ENST00000397408 A0A0D9SG52 128 aa15.4■□□□□ 0.06
TSPAN4-206ENST00000397408 PQLC2Q6ZP29 291 aa15.4■□□□□ 0.06
TSPAN4-206ENST00000397408 OR10J6PQ8NGY7 276 aa15.4■□□□□ 0.06
TSPAN4-206ENST00000397408 MUC7Q8TAX7 377 aa15.4■□□□□ 0.06
TSPAN4-206ENST00000397408 PRELID1Q9Y255 219 aa15.4■□□□□ 0.06
TSPAN4-206ENST00000397408 ICAM4Q14773 271 aa15.39■□□□□ 0.05
TSPAN4-206ENST00000397408 SPINK13Q1W4C9 94 aa15.39■□□□□ 0.05
TSPAN4-206ENST00000397408 AKAP14Q86UN6 197 aa15.39■□□□□ 0.05
TSPAN4-206ENST00000397408 KANTRA0A1W2PQU2 76 aa15.38■□□□□ 0.05
TSPAN4-206ENST00000397408 ZNF705EA8MWA4 302 aaPredicted RBP15.38■□□□□ 0.05
TSPAN4-206ENST00000397408 BOLA2-SMG1P6H3BVE0 249 aa15.38■□□□□ 0.05
TSPAN4-206ENST00000397408 M0R2Z0 102 aa15.38■□□□□ 0.05
TSPAN4-206ENST00000397408 BCL2L11O43521 198 aa15.38■□□□□ 0.05
TSPAN4-206ENST00000397408 RAB24Q969Q5 203 aa15.38■□□□□ 0.05
TSPAN4-206ENST00000397408 PPP1R14DQ9NXH3 145 aa15.38■□□□□ 0.05
TSPAN4-206ENST00000397408 X6R8D5 127 aa15.38■□□□□ 0.05
TSPAN4-206ENST00000397408 ARL14EPLP0DKL9 152 aa15.37■□□□□ 0.05
TSPAN4-206ENST00000397408 ACTR3CQ9C0K3 210 aaPredicted RBP15.37■□□□□ 0.05
TSPAN4-206ENST00000397408 AMBPP02760 352 aa15.36■□□□□ 0.05
TSPAN4-206ENST00000397408 STAG3L2P0CL84 134 aa15.36■□□□□ 0.05
TSPAN4-206ENST00000397408 STAG3L3P0CL85 134 aa15.36■□□□□ 0.05
TSPAN4-206ENST00000397408 RANP62826 216 aaKnown RBP15.36■□□□□ 0.05
TSPAN4-206ENST00000397408 AKR1C8PQ5T2L2 129 aa15.36■□□□□ 0.05
TSPAN4-206ENST00000397408 ZNF471Q9BX82 626 aaPredicted RBP15.36■□□□□ 0.05
TSPAN4-206ENST00000397408 IGHV3OR16-12A0A075B7B8 117 aa15.35■□□□□ 0.05
TSPAN4-206ENST00000397408 DEFB4AO15263 64 aa15.35■□□□□ 0.05
TSPAN4-206ENST00000397408 PFDN1O60925 122 aa15.35■□□□□ 0.05
TSPAN4-206ENST00000397408 ZNF705AQ6ZN79 300 aaPredicted RBP15.35■□□□□ 0.05
TSPAN4-206ENST00000397408 BAP18Q8IXM2 172 aa15.35■□□□□ 0.05
TSPAN4-206ENST00000397408 Q8NAQ8 132 aa15.35■□□□□ 0.05
TSPAN4-206ENST00000397408 IGF2BP2-AS1Q96M15 143 aa15.35■□□□□ 0.05
TSPAN4-206ENST00000397408 Q9H3A6 140 aa15.35■□□□□ 0.05
TSPAN4-206ENST00000397408 C11orf68Q9H3H3 251 aaKnown RBP15.35■□□□□ 0.05
TSPAN4-206ENST00000397408 IGHV4-28A0A0C4DH34 117 aa15.34■□□□□ 0.05
TSPAN4-206ENST00000397408 A0A1B0GVG6 124 aa15.34■□□□□ 0.05
TSPAN4-206ENST00000397408 NPIPB6E9PJ23 425 aa15.34■□□□□ 0.05
TSPAN4-206ENST00000397408 INSP01308 110 aa15.34■□□□□ 0.05
TSPAN4-206ENST00000397408 C1QBP02746 253 aa15.34■□□□□ 0.05
TSPAN4-206ENST00000397408 MIFP14174 115 aa15.34■□□□□ 0.05
TSPAN4-206ENST00000397408 TMUB2Q71RG4 321 aa15.34■□□□□ 0.05
TSPAN4-206ENST00000397408 SSX7Q7RTT5 188 aa15.34■□□□□ 0.05
TSPAN4-206ENST00000397408 LYPD1Q8N2G4 141 aa15.34■□□□□ 0.05
TSPAN4-206ENST00000397408 GOLT1BQ9Y3E0 138 aa15.34■□□□□ 0.05
TSPAN4-206ENST00000397408 TRAV12-2A0A075B6T6 113 aa15.34■□□□□ 0.05
TSPAN4-206ENST00000397408 C3orf84H3BNL1 204 aa15.34■□□□□ 0.05
TSPAN4-206ENST00000397408 CRXO43186 299 aaPredicted RBP15.34■□□□□ 0.05
TSPAN4-206ENST00000397408 IGKV2-40A0A087WW87 121 aaPredicted RBP15.33■□□□□ 0.04
TSPAN4-206ENST00000397408 IGKV2D-40P01614 121 aaPredicted RBP15.33■□□□□ 0.04
TSPAN4-206ENST00000397408 GCHFRP30047 84 aa15.33■□□□□ 0.04
TSPAN4-206ENST00000397408 ZNF726P1Q15940 193 aa15.33■□□□□ 0.04
TSPAN4-206ENST00000397408 ZFAND6Q6FIF0 208 aa15.33■□□□□ 0.04
TSPAN4-206ENST00000397408 C1orf158Q8N1D5 194 aa15.33■□□□□ 0.04
TSPAN4-206ENST00000397408 CTXND1A0A1B0GTU2 59 aa15.32■□□□□ 0.04
TSPAN4-206ENST00000397408 RBMY1A1P0DJD3 496 aaKnown RBP15.32■□□□□ 0.04
TSPAN4-206ENST00000397408 RBMY1CP0DJD4 496 aa15.32■□□□□ 0.04
TSPAN4-206ENST00000397408 CDKN1BP46527 198 aa15.32■□□□□ 0.04
TSPAN4-206ENST00000397408 CD300CQ08708 224 aa15.32■□□□□ 0.04
TSPAN4-206ENST00000397408 ERCC8Q13216 396 aa15.32■□□□□ 0.04
TSPAN4-206ENST00000397408 RBMY1FQ15415 496 aaKnown RBP15.32■□□□□ 0.04
TSPAN4-206ENST00000397408 IL17DQ8TAD2 202 aa15.32■□□□□ 0.04
TSPAN4-206ENST00000397408 TMEM208Q9BTX3 173 aa15.32■□□□□ 0.04
TSPAN4-206ENST00000397408 CXorf1O96002 111 aa15.31■□□□□ 0.04
TSPAN4-206ENST00000397408 CT45A10P0DMU9 189 aa15.31■□□□□ 0.04
TSPAN4-206ENST00000397408 CSN1S1P47710 185 aa15.31■□□□□ 0.04
TSPAN4-206ENST00000397408 EIF5AP63241 154 aaKnown RBP15.31■□□□□ 0.04
TSPAN4-206ENST00000397408 IQCF2Q8IXL9 164 aa15.31■□□□□ 0.04
TSPAN4-206ENST00000397408 HYLS1Q96M11 299 aa15.31■□□□□ 0.04
TSPAN4-206ENST00000397408 NEU1Q99519 415 aa15.31■□□□□ 0.04
TSPAN4-206ENST00000397408 OTORQ9NRC9 128 aa15.31■□□□□ 0.04
TSPAN4-206ENST00000397408 TSPOP30536 169 aa15.3■□□□□ 0.04
TSPAN4-206ENST00000397408 LGALSLQ3ZCW2 172 aaPredicted RBP15.3■□□□□ 0.04
TSPAN4-206ENST00000397408 ODF3Q96PU9 254 aa15.3■□□□□ 0.04
TSPAN4-206ENST00000397408 SEC11BP0C7V7 166 aa15.29■□□□□ 0.04
TSPAN4-206ENST00000397408 TPT1P13693 172 aaKnown RBP15.29■□□□□ 0.04
TSPAN4-206ENST00000397408 FAM74A1Q5RGS3 127 aa15.29■□□□□ 0.04
TSPAN4-206ENST00000397408 AGPAT4-IT1Q9H0P7 198 aa15.29■□□□□ 0.04
TSPAN4-206ENST00000397408 TMEM167BQ9NRX6 74 aa15.29■□□□□ 0.04
TSPAN4-206ENST00000397408 PGPA6NDG6 321 aa15.28■□□□□ 0.04
TSPAN4-206ENST00000397408 SMIM9A6NGZ8 99 aa15.28■□□□□ 0.04
TSPAN4-206ENST00000397408 J3KRW8 73 aa15.28■□□□□ 0.04
TSPAN4-206ENST00000397408 LEPP41159 167 aa15.28■□□□□ 0.04
TSPAN4-206ENST00000397408 KIR3DS1Q14943 382 aa15.28■□□□□ 0.04
TSPAN4-206ENST00000397408 CASC10Q5T4H9 136 aa15.28■□□□□ 0.04
TSPAN4-206ENST00000397408 C9orf47Q6ZRZ4 202 aa15.28■□□□□ 0.04
TSPAN4-206ENST00000397408 STOML3Q8TAV4 291 aa15.28■□□□□ 0.04
TSPAN4-206ENST00000397408 CMTM2Q8TAZ6 248 aa15.28■□□□□ 0.04
TSPAN4-206ENST00000397408 SUN5Q8TC36 379 aa15.28■□□□□ 0.04
TSPAN4-206ENST00000397408 LINC00477Q96M19 166 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms