RNA–Protein interactions for RNA: ENST00000397149.3

SMU1-201, Transcript of SMU1, DNA replication regulator and spliceosomal factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMU1, Length 7,122 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMU1-201ENST00000397149 LYZL4Q96KX0 146 aa10□□□□□ -0.81
SMU1-201ENST00000397149 PPDPFLQ8WWR9 84 aa9.99□□□□□ -0.81
SMU1-201ENST00000397149 BUB1B-PAK6H3BSN5 160 aa9.99□□□□□ -0.81
SMU1-201ENST00000397149 COX7B2Q8TF08 81 aa9.99□□□□□ -0.81
SMU1-201ENST00000397149 TM2D2Q9BX73 214 aa9.99□□□□□ -0.81
SMU1-201ENST00000397149 COL8A2P25067 703 aa9.99□□□□□ -0.81
SMU1-201ENST00000397149 NOP10Q9NPE3 64 aaKnown RBP9.99□□□□□ -0.81
SMU1-201ENST00000397149 C5orf38Q86SI9 138 aa9.99□□□□□ -0.81
SMU1-201ENST00000397149 DOCK11Q5JSL3 2073 aa9.99□□□□□ -0.81
SMU1-201ENST00000397149 F6UB75 175 aa9.99□□□□□ -0.81
SMU1-201ENST00000397149 OR11H6Q8NGC7 330 aa9.99□□□□□ -0.81
SMU1-201ENST00000397149 FANCD2OSQ96PS1 177 aa9.99□□□□□ -0.81
SMU1-201ENST00000397149 TRGV9Q99603 122 aa9.99□□□□□ -0.81
SMU1-201ENST00000397149 LOC105371267A0A1B0GV96 52 aa9.99□□□□□ -0.81
SMU1-201ENST00000397149 FGFBP3Q8TAT2 258 aa9.99□□□□□ -0.81
SMU1-201ENST00000397149 B5MCH6 92 aa9.98□□□□□ -0.81
SMU1-201ENST00000397149 IGLL5B9A064 214 aa9.98□□□□□ -0.81
SMU1-201ENST00000397149 TMEM178BH3BS89 294 aa9.98□□□□□ -0.81
SMU1-201ENST00000397149 WDR83OSQ9Y284 106 aa9.98□□□□□ -0.81
SMU1-201ENST00000397149 BAALC-AS2P0C853 105 aa9.98□□□□□ -0.81
SMU1-201ENST00000397149 C1orf194Q5T5A4 169 aa9.98□□□□□ -0.81
SMU1-201ENST00000397149 MINOS1Q5TGZ0 78 aa9.98□□□□□ -0.81
SMU1-201ENST00000397149 MINOS1-NBL1R4GNA1 71 aa9.98□□□□□ -0.81
SMU1-201ENST00000397149 LYPD2Q6UXB3 125 aa9.98□□□□□ -0.81
SMU1-201ENST00000397149 ORMDL1Q9P0S3 153 aa9.98□□□□□ -0.81
SMU1-201ENST00000397149 LRRK1Q38SD2 2015 aa9.98□□□□□ -0.81
SMU1-201ENST00000397149 PINLYPA6NC86 204 aa9.97□□□□□ -0.81
SMU1-201ENST00000397149 SDHAF1A6NFY7 115 aa9.97□□□□□ -0.81
SMU1-201ENST00000397149 ZNRD1Q9P1U0 126 aa9.97□□□□□ -0.81
SMU1-201ENST00000397149 M0R1W7 72 aa9.97□□□□□ -0.81
SMU1-201ENST00000397149 NDUFS6O75380 124 aaKnown RBP9.97□□□□□ -0.81
SMU1-201ENST00000397149 CTSGP08311 255 aa9.97□□□□□ -0.81
SMU1-201ENST00000397149 MUSTN1Q8IVN3 82 aa9.97□□□□□ -0.81
SMU1-201ENST00000397149 TRAV4A0A0B4J268 109 aa9.97□□□□□ -0.81
SMU1-201ENST00000397149 H3BMG7 143 aa9.97□□□□□ -0.81
SMU1-201ENST00000397149 IGHV4-59P01825 116 aa9.97□□□□□ -0.81
SMU1-201ENST00000397149 PCNX2A6NKB5 2137 aa9.97□□□□□ -0.81
SMU1-201ENST00000397149 C20orf204Q6ZNR8 217 aa9.97□□□□□ -0.81
SMU1-201ENST00000397149 CD200R1LQ6Q8B3 271 aa9.97□□□□□ -0.81
SMU1-201ENST00000397149 LINC01551Q86U37 167 aa9.97□□□□□ -0.81
SMU1-201ENST00000397149 CAMK2N2Q96S95 79 aa9.97□□□□□ -0.81
SMU1-201ENST00000397149 NOTCH3Q9UM47 2321 aa9.97□□□□□ -0.81
SMU1-201ENST00000397149 A0A087WV48 116 aa9.96□□□□□ -0.81
SMU1-201ENST00000397149 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.96□□□□□ -0.81
SMU1-201ENST00000397149 IGKV2-29A2NJV5 120 aaPredicted RBP9.96□□□□□ -0.81
SMU1-201ENST00000397149 H0YJW9 148 aa9.96□□□□□ -0.81
SMU1-201ENST00000397149 ASPHD1Q5U4P2 390 aa9.96□□□□□ -0.81
SMU1-201ENST00000397149 TMEM141Q96I45 108 aa9.96□□□□□ -0.81
SMU1-201ENST00000397149 VSIG2Q96IQ7 327 aa9.96□□□□□ -0.81
SMU1-201ENST00000397149 IGKV1D-8A0A087WSZ0 117 aa9.96□□□□□ -0.82
SMU1-201ENST00000397149 MRPL23Q16540 153 aaKnown RBP9.96□□□□□ -0.82
SMU1-201ENST00000397149 SHISA3A0PJX4 238 aa9.96□□□□□ -0.82
SMU1-201ENST00000397149 WIPF3A6NGB9 483 aa9.96□□□□□ -0.82
SMU1-201ENST00000397149 ATP6V0E1O15342 81 aa9.96□□□□□ -0.82
SMU1-201ENST00000397149 NTF4P34130 210 aa9.96□□□□□ -0.82
SMU1-201ENST00000397149 NTN5Q8WTR8 489 aaPredicted RBP9.96□□□□□ -0.82
SMU1-201ENST00000397149 G3V318 75 aa9.95□□□□□ -0.82
SMU1-201ENST00000397149 NREPQ16612 68 aa9.95□□□□□ -0.82
SMU1-201ENST00000397149 GPHB5Q86YW7 130 aa9.95□□□□□ -0.82
SMU1-201ENST00000397149 NPBQ8NG41 125 aa9.95□□□□□ -0.82
SMU1-201ENST00000397149 NCR3O14931 201 aa9.95□□□□□ -0.82
SMU1-201ENST00000397149 PRO1854Q9UHT4 67 aa9.95□□□□□ -0.82
SMU1-201ENST00000397149 LINC00271P0C7V0 271 aa9.95□□□□□ -0.82
SMU1-201ENST00000397149 AMTNQ6UX39 209 aa9.95□□□□□ -0.82
SMU1-201ENST00000397149 POU2AF1Q16633 256 aa9.95□□□□□ -0.82
SMU1-201ENST00000397149 ARTNQ5T4W7 220 aa9.95□□□□□ -0.82
SMU1-201ENST00000397149 CD177Q8N6Q3 437 aa9.95□□□□□ -0.82
SMU1-201ENST00000397149 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.95□□□□□ -0.822e-12■■■■■ 57.9
SMU1-201ENST00000397149 IGHV1-24A0A0C4DH33 117 aa9.95□□□□□ -0.82
SMU1-201ENST00000397149 A0A1B0GUS0 222 aa9.95□□□□□ -0.82
SMU1-201ENST00000397149 Q0VFX4 171 aa9.95□□□□□ -0.82
SMU1-201ENST00000397149 K7ERS5 55 aa9.94□□□□□ -0.82
SMU1-201ENST00000397149 PAQR4Q8N4S7 273 aaPredicted RBP9.94□□□□□ -0.82
SMU1-201ENST00000397149 HS3ST6Q96QI5 342 aa9.94□□□□□ -0.82
SMU1-201ENST00000397149 MED12Q93074 2177 aa9.94□□□□□ -0.82
SMU1-201ENST00000397149 FREM3P0C091 2139 aa9.94□□□□□ -0.82
SMU1-201ENST00000397149 A0A096LNI7 61 aa9.94□□□□□ -0.82
SMU1-201ENST00000397149 H0YIZ8 118 aa9.94□□□□□ -0.82
SMU1-201ENST00000397149 CTHRC1Q96CG8 243 aa9.94□□□□□ -0.82
SMU1-201ENST00000397149 A0A0G2JNJ9 132 aa9.94□□□□□ -0.82
SMU1-201ENST00000397149 A0A1B0GTI1 187 aa9.94□□□□□ -0.82
SMU1-201ENST00000397149 SMIM10L1P0DMW3 83 aa9.94□□□□□ -0.82
SMU1-201ENST00000397149 SMIM10Q96HG1 83 aa9.94□□□□□ -0.82
SMU1-201ENST00000397149 Q9UFV3 132 aa9.94□□□□□ -0.82
SMU1-201ENST00000397149 F8W735 103 aaPredicted RBP9.93□□□□□ -0.82
SMU1-201ENST00000397149 ETV2O00321 342 aaPredicted RBP9.93□□□□□ -0.82
SMU1-201ENST00000397149 PSMB8P28062 276 aa9.93□□□□□ -0.82
SMU1-201ENST00000397149 Q86TA4 180 aa9.93□□□□□ -0.82
SMU1-201ENST00000397149 MLST8Q9BVC4 326 aa9.93□□□□□ -0.82
SMU1-201ENST00000397149 TNRC6CQ9HCJ0 1690 aaKnown RBP9.93□□□□□ -0.82
SMU1-201ENST00000397149 TEX36Q5VZQ5 186 aa9.93□□□□□ -0.82
SMU1-201ENST00000397149 MYOFQ9NZM1 2061 aa9.93□□□□□ -0.82
SMU1-201ENST00000397149 MCM3APO60318 1980 aa9.93□□□□□ -0.82
SMU1-201ENST00000397149 KIAA1217Q5T5P2 1943 aa9.93□□□□□ -0.82
SMU1-201ENST00000397149 WDR86Q86TI4 376 aa9.93□□□□□ -0.82
SMU1-201ENST00000397149 ZNF831Q5JPB2 1677 aa9.92□□□□□ -0.82
SMU1-201ENST00000397149 NHSQ6T4R5 1651 aa9.92□□□□□ -0.82
SMU1-201ENST00000397149 IGKV1-9A0A0C4DH69 117 aa9.92□□□□□ -0.82
SMU1-201ENST00000397149 MSMBP08118 114 aa9.92□□□□□ -0.82
SMU1-201ENST00000397149 HERVK_113P63121 156 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms