RNA–Protein interactions for RNA: ENST00000397024.1

MCF2L-207, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5 BASIC

Gene MCF2L, Length 490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-207ENST00000397024 ZNF586Q9NXT0 402 aa13.24□□□□□ -0.29
MCF2L-207ENST00000397024 CT45A10P0DMU9 189 aa13.23□□□□□ -0.29
MCF2L-207ENST00000397024 PVALBP20472 110 aaPredicted RBP13.23□□□□□ -0.29
MCF2L-207ENST00000397024 S100A11P31949 105 aa13.23□□□□□ -0.29
MCF2L-207ENST00000397024 RPL29P47914 159 aaKnown RBP13.23□□□□□ -0.29
MCF2L-207ENST00000397024 SLC39A9Q9NUM3 307 aa13.23□□□□□ -0.29
MCF2L-207ENST00000397024 PXMP4Q9Y6I8 212 aa13.23□□□□□ -0.29
MCF2L-207ENST00000397024 UBE2L5PA0A1B0GUS4 154 aa13.22□□□□□ -0.29
MCF2L-207ENST00000397024 CBY3A6NI87 242 aa13.22□□□□□ -0.29
MCF2L-207ENST00000397024 F5H768 121 aa13.22□□□□□ -0.29
MCF2L-207ENST00000397024 GFI1BQ5VTD9 330 aa13.22□□□□□ -0.29
MCF2L-207ENST00000397024 C15orf53Q8NAA6 179 aa13.22□□□□□ -0.29
MCF2L-207ENST00000397024 OR1L4Q8NGR5 311 aa13.22□□□□□ -0.29
MCF2L-207ENST00000397024 OR10J6PQ8NGY7 276 aa13.22□□□□□ -0.29
MCF2L-207ENST00000397024 RNASE8Q8TDE3 154 aaKnown RBP13.22□□□□□ -0.29
MCF2L-207ENST00000397024 NOP10Q9NPE3 64 aaKnown RBP13.22□□□□□ -0.29
MCF2L-207ENST00000397024 TIMM8BQ9Y5J9 83 aaPredicted RBP13.22□□□□□ -0.29
MCF2L-207ENST00000397024 H7BYZ3 331 aa13.21□□□□□ -0.29
MCF2L-207ENST00000397024 BAXQ07812 192 aa13.21□□□□□ -0.29
MCF2L-207ENST00000397024 ASAH1Q13510 395 aa13.21□□□□□ -0.29
MCF2L-207ENST00000397024 CHAC2Q8WUX2 184 aa13.21□□□□□ -0.29
MCF2L-207ENST00000397024 C16orf74Q96GX8 76 aa13.21□□□□□ -0.29
MCF2L-207ENST00000397024 J3KRW8 73 aa13.2□□□□□ -0.3
MCF2L-207ENST00000397024 SIX6O95475 246 aa13.2□□□□□ -0.3
MCF2L-207ENST00000397024 ATP5G1P05496 136 aa13.2□□□□□ -0.3
MCF2L-207ENST00000397024 FGF7P21781 194 aa13.2□□□□□ -0.3
MCF2L-207ENST00000397024 ATP5G3P48201 142 aa13.2□□□□□ -0.3
MCF2L-207ENST00000397024 GCSAMLQ5JQS6 135 aa13.2□□□□□ -0.3
MCF2L-207ENST00000397024 MZT2BQ6NZ67 158 aa13.2□□□□□ -0.3
MCF2L-207ENST00000397024 ZNF493Q6ZR52 646 aa13.2□□□□□ -0.3
MCF2L-207ENST00000397024 PFDN5Q99471 154 aa13.2□□□□□ -0.3
MCF2L-207ENST00000397024 NPIPB6E9PJ23 425 aa13.19□□□□□ -0.3
MCF2L-207ENST00000397024 NDUFB4O95168 129 aa13.19□□□□□ -0.3
MCF2L-207ENST00000397024 NHLH2Q02577 135 aa13.19□□□□□ -0.3
MCF2L-207ENST00000397024 GUK1Q16774 197 aa13.19□□□□□ -0.3
MCF2L-207ENST00000397024 LINC00299Q6ZSB3 139 aa13.19□□□□□ -0.3
MCF2L-207ENST00000397024 STX12Q86Y82 276 aa13.19□□□□□ -0.3
MCF2L-207ENST00000397024 TMEM263Q8WUH6 116 aaKnown RBP13.19□□□□□ -0.3
MCF2L-207ENST00000397024 GPN1Q9HCN4 374 aaPredicted RBP13.19□□□□□ -0.3
MCF2L-207ENST00000397024 TRBV19A0A075B6N1 114 aa13.18□□□□□ -0.3
MCF2L-207ENST00000397024 M0R3E3 92 aa13.18□□□□□ -0.3
MCF2L-207ENST00000397024 NUDT3O95989 172 aa13.18□□□□□ -0.3
MCF2L-207ENST00000397024 HBG1P69891 147 aa13.18□□□□□ -0.3
MCF2L-207ENST00000397024 HBG2P69892 147 aa13.18□□□□□ -0.3
MCF2L-207ENST00000397024 IFITM3Q01628 133 aa13.18□□□□□ -0.3
MCF2L-207ENST00000397024 ERCC8Q13216 396 aa13.18□□□□□ -0.3
MCF2L-207ENST00000397024 ATP6V1FQ16864 119 aa13.18□□□□□ -0.3
MCF2L-207ENST00000397024 C20orf144Q9BQM9 153 aa13.18□□□□□ -0.3
MCF2L-207ENST00000397024 TRAV12-3A0A0B4J271 114 aa13.17□□□□□ -0.3
MCF2L-207ENST00000397024 PYYP10082 97 aa13.17□□□□□ -0.3
MCF2L-207ENST00000397024 LINC00612Q8N6U2 182 aa13.17□□□□□ -0.3
MCF2L-207ENST00000397024 S100ZQ8WXG8 99 aa13.17□□□□□ -0.3
MCF2L-207ENST00000397024 TMEM14CQ9P0S9 112 aa13.17□□□□□ -0.3
MCF2L-207ENST00000397024 H0YIZ8 118 aa13.16□□□□□ -0.3
MCF2L-207ENST00000397024 ZNF253O75346 499 aa13.16□□□□□ -0.3
MCF2L-207ENST00000397024 RNF141Q8WVD5 230 aa13.16□□□□□ -0.3
MCF2L-207ENST00000397024 ODF3Q96PU9 254 aa13.16□□□□□ -0.3
MCF2L-207ENST00000397024 ATG101Q9BSB4 218 aa13.16□□□□□ -0.3
MCF2L-207ENST00000397024 NPCDR1Q9BY65 106 aa13.16□□□□□ -0.3
MCF2L-207ENST00000397024 OR5AC2Q9NZP5 309 aa13.16□□□□□ -0.3
MCF2L-207ENST00000397024 UPK1BO75841 260 aa13.15□□□□□ -0.3
MCF2L-207ENST00000397024 HIST1H1EP10412 219 aaKnown RBP13.15□□□□□ -0.3
MCF2L-207ENST00000397024 LEPP41159 167 aa13.15□□□□□ -0.3
MCF2L-207ENST00000397024 FAM3BP58499 235 aaPredicted RBP13.15□□□□□ -0.3
MCF2L-207ENST00000397024 C1orf134Q5TEV5 83 aa13.15□□□□□ -0.3
MCF2L-207ENST00000397024 CCDC28AQ8IWP9 274 aa13.15□□□□□ -0.3
MCF2L-207ENST00000397024 ZNRF2Q8NHG8 242 aa13.15□□□□□ -0.3
MCF2L-207ENST00000397024 THAP6Q8TBB0 222 aa13.15□□□□□ -0.3
MCF2L-207ENST00000397024 FAM167A-AS1Q96KT0 104 aa13.15□□□□□ -0.3
MCF2L-207ENST00000397024 LINC00588Q9Y4M8 146 aa13.15□□□□□ -0.3
MCF2L-207ENST00000397024 MPDU1O75352 247 aa13.14□□□□□ -0.31
MCF2L-207ENST00000397024 EXOC3-AS1Q8N2X6 119 aa13.14□□□□□ -0.31
MCF2L-207ENST00000397024 OR5C1Q8NGR4 320 aa13.14□□□□□ -0.31
MCF2L-207ENST00000397024 BLNKQ8WV28 456 aa13.14□□□□□ -0.31
MCF2L-207ENST00000397024 SLC25A2Q9BXI2 301 aa13.14□□□□□ -0.31
MCF2L-207ENST00000397024 AGPAT4-IT1Q9H0P7 198 aa13.14□□□□□ -0.31
MCF2L-207ENST00000397024 GAGE12BA1L429 117 aa13.13□□□□□ -0.31
MCF2L-207ENST00000397024 GAGE7O76087 117 aa13.13□□□□□ -0.31
MCF2L-207ENST00000397024 GAGE12FP0CL80 117 aa13.13□□□□□ -0.31
MCF2L-207ENST00000397024 GAGE12GP0CL81 117 aa13.13□□□□□ -0.31
MCF2L-207ENST00000397024 GAGE12IP0CL82 117 aa13.13□□□□□ -0.31
MCF2L-207ENST00000397024 HOXA5P20719 270 aa13.13□□□□□ -0.31
MCF2L-207ENST00000397024 OR5I1Q13606 314 aa13.13□□□□□ -0.31
MCF2L-207ENST00000397024 MIR17HGQ75NE6 70 aa13.13□□□□□ -0.31
MCF2L-207ENST00000397024 ENKURQ8TC29 256 aa13.13□□□□□ -0.31
MCF2L-207ENST00000397024 MRPL53Q96EL3 112 aaKnown RBP13.13□□□□□ -0.31
MCF2L-207ENST00000397024 FAM19A4Q96LR4 140 aa13.13□□□□□ -0.31
MCF2L-207ENST00000397024 TIMM9Q9Y5J7 89 aa13.13□□□□□ -0.31
MCF2L-207ENST00000397024 TRAV26-1A0A087WT03 109 aa13.12□□□□□ -0.31
MCF2L-207ENST00000397024 A6NHS1 94 aa13.12□□□□□ -0.31
MCF2L-207ENST00000397024 E5RGE8 158 aa13.12□□□□□ -0.31
MCF2L-207ENST00000397024 ZNF324O75467 553 aaPredicted RBP13.12□□□□□ -0.31
MCF2L-207ENST00000397024 CD300CQ08708 224 aa13.12□□□□□ -0.31
MCF2L-207ENST00000397024 CLINT1Q14677 625 aa13.12□□□□□ -0.31
MCF2L-207ENST00000397024 LRRC37A5PQ49AS3 106 aa13.12□□□□□ -0.31
MCF2L-207ENST00000397024 NMES1Q9C002 83 aa13.12□□□□□ -0.31
MCF2L-207ENST00000397024 PCLOQ9Y6V0 5065 aa13.11□□□□□ -0.31
MCF2L-207ENST00000397024 NBDYA0A0U1RRE5 68 aa13.11□□□□□ -0.31
MCF2L-207ENST00000397024 RLN2P04090 185 aa13.11□□□□□ -0.31
MCF2L-207ENST00000397024 SLC25A5P05141 298 aaKnown RBP13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms