RNA–Protein interactions for RNA: ENST00000396653.2

AP1S3-202, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 4 BASIC

Gene AP1S3, Length 589 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-202ENST00000396653 FAM213BQ8TBF2 198 aa12.1□□□□□ -0.47
AP1S3-202ENST00000396653 MBD3L1Q8WWY6 194 aa12.1□□□□□ -0.47
AP1S3-202ENST00000396653 RPUSD4Q96CM3 377 aaKnown RBP12.1□□□□□ -0.47
AP1S3-202ENST00000396653 UBE2CO00762 179 aa12.09□□□□□ -0.47
AP1S3-202ENST00000396653 DUSP14O95147 198 aaKnown RBP12.09□□□□□ -0.47
AP1S3-202ENST00000396653 FHITP49789 147 aa12.09□□□□□ -0.47
AP1S3-202ENST00000396653 HAGHQ16775 308 aa12.09□□□□□ -0.47
AP1S3-202ENST00000396653 GDF5OSQ5U4N7 250 aa12.09□□□□□ -0.47
AP1S3-202ENST00000396653 MORN3Q6PF18 240 aaPredicted RBP12.09□□□□□ -0.47
AP1S3-202ENST00000396653 OR8A1Q8NGG7 326 aa12.09□□□□□ -0.47
AP1S3-202ENST00000396653 Q9H3A6 140 aa12.09□□□□□ -0.47
AP1S3-202ENST00000396653 BOLA1Q9Y3E2 137 aa12.09□□□□□ -0.47
AP1S3-202ENST00000396653 F6UB75 175 aa12.08□□□□□ -0.48
AP1S3-202ENST00000396653 RPL35AP18077 110 aaKnown RBP12.08□□□□□ -0.48
AP1S3-202ENST00000396653 DEFB1P60022 68 aa12.08□□□□□ -0.48
AP1S3-202ENST00000396653 ICAM4Q14773 271 aa12.08□□□□□ -0.48
AP1S3-202ENST00000396653 FAM74A1Q5RGS3 127 aa12.08□□□□□ -0.48
AP1S3-202ENST00000396653 SBSPONQ8IVN8 264 aa12.08□□□□□ -0.48
AP1S3-202ENST00000396653 EXOC3-AS1Q8N2X6 119 aa12.08□□□□□ -0.48
AP1S3-202ENST00000396653 ARL6IP6Q8N6S5 226 aa12.08□□□□□ -0.48
AP1S3-202ENST00000396653 OTORQ9NRC9 128 aa12.08□□□□□ -0.48
AP1S3-202ENST00000396653 M0R3E3 92 aa12.07□□□□□ -0.48
AP1S3-202ENST00000396653 H2AFB1P0C5Y9 115 aa12.07□□□□□ -0.48
AP1S3-202ENST00000396653 FGF8P55075 233 aaPredicted RBP12.07□□□□□ -0.48
AP1S3-202ENST00000396653 RANP62826 216 aaKnown RBP12.07□□□□□ -0.48
AP1S3-202ENST00000396653 CSTL1Q9H114 145 aa12.07□□□□□ -0.48
AP1S3-202ENST00000396653 ARL2-SNX15V9GYD0 113 aa12.07□□□□□ -0.48
AP1S3-202ENST00000396653 TRAV1-1A0A0B4J248 108 aa12.06□□□□□ -0.48
AP1S3-202ENST00000396653 A0A1W2PRE2 83 aa12.06□□□□□ -0.48
AP1S3-202ENST00000396653 ZNF705FA8MVS1 300 aaPredicted RBP12.06□□□□□ -0.48
AP1S3-202ENST00000396653 NHLRC4P0CG21 123 aaPredicted RBP12.06□□□□□ -0.48
AP1S3-202ENST00000396653 CNN1P51911 297 aaKnown RBP12.06□□□□□ -0.48
AP1S3-202ENST00000396653 NUTF2P61970 127 aaKnown RBP12.06□□□□□ -0.48
AP1S3-202ENST00000396653 IQCF2Q8IXL9 164 aa12.06□□□□□ -0.48
AP1S3-202ENST00000396653 OR10J6PQ8NGY7 276 aa12.06□□□□□ -0.48
AP1S3-202ENST00000396653 RXFP4Q8TDU9 374 aa12.06□□□□□ -0.48
AP1S3-202ENST00000396653 SFT2D1Q8WV19 159 aa12.06□□□□□ -0.48
AP1S3-202ENST00000396653 TM2D3Q9BRN9 247 aa12.06□□□□□ -0.48
AP1S3-202ENST00000396653 PRAC2D3DTV9 90 aa12.05□□□□□ -0.48
AP1S3-202ENST00000396653 TEX46H3BTG2 121 aa12.05□□□□□ -0.48
AP1S3-202ENST00000396653 CSN1S1P47710 185 aa12.05□□□□□ -0.48
AP1S3-202ENST00000396653 HIST1H1AQ02539 215 aaPredicted RBP12.05□□□□□ -0.48
AP1S3-202ENST00000396653 ALKAL2Q6UX46 152 aa12.05□□□□□ -0.48
AP1S3-202ENST00000396653 Q6ZWC4 215 aa12.05□□□□□ -0.48
AP1S3-202ENST00000396653 OR4B1Q8NGF8 309 aa12.05□□□□□ -0.48
AP1S3-202ENST00000396653 TMPRSS5Q9H3S3 457 aa12.05□□□□□ -0.48
AP1S3-202ENST00000396653 RBAKDNA6NC62 111 aa12.04□□□□□ -0.48
AP1S3-202ENST00000396653 PGPA6NDG6 321 aa12.04□□□□□ -0.48
AP1S3-202ENST00000396653 NPIPB6E9PJ23 425 aa12.04□□□□□ -0.48
AP1S3-202ENST00000396653 CA1P00915 261 aaPredicted RBP12.04□□□□□ -0.48
AP1S3-202ENST00000396653 HBE1P02100 147 aa12.04□□□□□ -0.48
AP1S3-202ENST00000396653 PPT1P50897 306 aa12.04□□□□□ -0.48
AP1S3-202ENST00000396653 AMTNQ6UX39 209 aa12.04□□□□□ -0.48
AP1S3-202ENST00000396653 CMTM2Q8TAZ6 248 aa12.04□□□□□ -0.48
AP1S3-202ENST00000396653 ASCL2Q99929 193 aa12.04□□□□□ -0.48
AP1S3-202ENST00000396653 SPATA25Q9BR10 227 aa12.04□□□□□ -0.48
AP1S3-202ENST00000396653 C1QTNF4Q9BXJ3 329 aa12.04□□□□□ -0.48
AP1S3-202ENST00000396653 NKX6-2Q9C056 277 aaPredicted RBP12.04□□□□□ -0.48
AP1S3-202ENST00000396653 TP53TG1Q9Y2A0 90 aa12.04□□□□□ -0.48
AP1S3-202ENST00000396653 AMBPP02760 352 aa12.03□□□□□ -0.48
AP1S3-202ENST00000396653 SLC25A5P05141 298 aaKnown RBP12.03□□□□□ -0.48
AP1S3-202ENST00000396653 C5orf17Q8NAS9 161 aa12.03□□□□□ -0.48
AP1S3-202ENST00000396653 ODF3Q96PU9 254 aa12.03□□□□□ -0.48
AP1S3-202ENST00000396653 DNAH9Q9NYC9 4486 aa12.03□□□□□ -0.48
AP1S3-202ENST00000396653 SERTM2A0A1B0GWG4 89 aa12.02□□□□□ -0.49
AP1S3-202ENST00000396653 FAM74A7A6NL05 159 aa12.02□□□□□ -0.49
AP1S3-202ENST00000396653 ZNF705EA8MWA4 302 aaPredicted RBP12.02□□□□□ -0.49
AP1S3-202ENST00000396653 GGTLC3B5MD39 225 aa12.02□□□□□ -0.49
AP1S3-202ENST00000396653 DIRC3C9JPN6 131 aa12.02□□□□□ -0.49
AP1S3-202ENST00000396653 IGKV3-20P01619 116 aa12.02□□□□□ -0.49
AP1S3-202ENST00000396653 GIG44P09565 113 aaPredicted RBP12.02□□□□□ -0.49
AP1S3-202ENST00000396653 ZNF705DP0CH99 300 aaPredicted RBP12.02□□□□□ -0.49
AP1S3-202ENST00000396653 ZNF705BP0CI00 300 aaPredicted RBP12.02□□□□□ -0.49
AP1S3-202ENST00000396653 C9orf47Q6ZRZ4 202 aa12.02□□□□□ -0.49
AP1S3-202ENST00000396653 LINC00477Q96M19 166 aa12.02□□□□□ -0.49
AP1S3-202ENST00000396653 ZMAT4Q9H898 229 aa12.02□□□□□ -0.49
AP1S3-202ENST00000396653 BLOC1S1P78537 153 aa12.01□□□□□ -0.49
AP1S3-202ENST00000396653 TCEAL7Q9BRU2 100 aa12.01□□□□□ -0.49
AP1S3-202ENST00000396653 YTHDF2Q9Y5A9 579 aaKnown RBP12.01□□□□□ -0.49
AP1S3-202ENST00000396653 IGKV2-40A0A087WW87 121 aaPredicted RBP12□□□□□ -0.49
AP1S3-202ENST00000396653 IGKV2D-40P01614 121 aaPredicted RBP12□□□□□ -0.49
AP1S3-202ENST00000396653 UBE2G2P60604 165 aa12□□□□□ -0.49
AP1S3-202ENST00000396653 SUMO1P63165 101 aaKnown RBP12□□□□□ -0.49
AP1S3-202ENST00000396653 DEFB135Q30KP9 77 aa12□□□□□ -0.49
AP1S3-202ENST00000396653 RNF183Q96D59 192 aa12□□□□□ -0.49
AP1S3-202ENST00000396653 SLC35B3Q9H1N7 401 aa12□□□□□ -0.49
AP1S3-202ENST00000396653 MANBALQ9NQG1 85 aa12□□□□□ -0.49
AP1S3-202ENST00000396653 PPP1R14DQ9NXH3 145 aa12□□□□□ -0.49
AP1S3-202ENST00000396653 TRBV7-9A0A0J9YWB2 115 aa11.99□□□□□ -0.49
AP1S3-202ENST00000396653 A0A1B0GV50 99 aa11.99□□□□□ -0.49
AP1S3-202ENST00000396653 TSPOP30536 169 aa11.99□□□□□ -0.49
AP1S3-202ENST00000396653 PMS2P11Q13670 270 aa11.99□□□□□ -0.49
AP1S3-202ENST00000396653 TMEM78Q5T7P6 136 aa11.99□□□□□ -0.49
AP1S3-202ENST00000396653 TEX261Q6UWH6 196 aa11.99□□□□□ -0.49
AP1S3-202ENST00000396653 CSNK1G2-AS1Q8NCQ2 148 aa11.99□□□□□ -0.49
AP1S3-202ENST00000396653 RCHY1Q96PM5 261 aa11.99□□□□□ -0.49
AP1S3-202ENST00000396653 SPRY2O43597 315 aa11.98□□□□□ -0.49
AP1S3-202ENST00000396653 TCRAP04437 139 aa11.98□□□□□ -0.49
AP1S3-202ENST00000396653 CT45A10P0DMU9 189 aa11.98□□□□□ -0.49
AP1S3-202ENST00000396653 PRB4P10163 310 aaPredicted RBP11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 98.3 ms