RNA–Protein interactions for RNA: ENST00000396578.7

COL4A3-202, Transcript of collagen type IV alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL4A3, Length 8,097 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-202ENST00000396578 PLXNB3Q9ULL4 1909 aa11.38□□□□□ -0.59
COL4A3-202ENST00000396578 LOC102723996A0A087X1L8 192 aa11.38□□□□□ -0.59
COL4A3-202ENST00000396578 IGLV3-19P01714 112 aa11.38□□□□□ -0.59
COL4A3-202ENST00000396578 E9PLN8 166 aa11.38□□□□□ -0.59
COL4A3-202ENST00000396578 MMP23AO75900 390 aa11.38□□□□□ -0.59
COL4A3-202ENST00000396578 HAPLN4Q86UW8 402 aa11.38□□□□□ -0.59
COL4A3-202ENST00000396578 NKAPP1Q8N9T2 125 aa11.38□□□□□ -0.59
COL4A3-202ENST00000396578 SPANXCQ9NY87 97 aa11.38□□□□□ -0.59
COL4A3-202ENST00000396578 FGF6P10767 208 aa11.37□□□□□ -0.59
COL4A3-202ENST00000396578 PIP4P2Q8N4L2 257 aa11.37□□□□□ -0.59
COL4A3-202ENST00000396578 ATP6V0BQ99437 205 aa11.37□□□□□ -0.59
COL4A3-202ENST00000396578 I3L3M4 83 aa11.37□□□□□ -0.59
COL4A3-202ENST00000396578 EREGO14944 169 aa11.37□□□□□ -0.59
COL4A3-202ENST00000396578 UBE2E2Q96LR5 201 aa11.37□□□□□ -0.59
COL4A3-202ENST00000396578 TNS1Q9HBL0 1735 aaKnown RBP11.37□□□□□ -0.59
COL4A3-202ENST00000396578 C15orf62A8K5M9 175 aa11.37□□□□□ -0.59
COL4A3-202ENST00000396578 TMEM131Q92545 1883 aa11.37□□□□□ -0.59
COL4A3-202ENST00000396578 PSPNO60542 156 aa11.37□□□□□ -0.59
COL4A3-202ENST00000396578 TRBV6-6A0A0A6YYG2 114 aa11.37□□□□□ -0.59
COL4A3-202ENST00000396578 KLHL30-AS1Q8NEE0 82 aa11.37□□□□□ -0.59
COL4A3-202ENST00000396578 ARMS2P0C7Q2 107 aa11.37□□□□□ -0.59
COL4A3-202ENST00000396578 CD177Q8N6Q3 437 aa11.37□□□□□ -0.59
COL4A3-202ENST00000396578 CFHR2P36980 270 aa11.36□□□□□ -0.59
COL4A3-202ENST00000396578 MORN5Q5VZ52 161 aa11.36□□□□□ -0.59
COL4A3-202ENST00000396578 TMEM258P61165 79 aa11.36□□□□□ -0.59
COL4A3-202ENST00000396578 IL17RELQ6ZVW7 336 aa11.36□□□□□ -0.59
COL4A3-202ENST00000396578 PLCE1Q9P212 2302 aa11.36□□□□□ -0.59
COL4A3-202ENST00000396578 LINC00473A8K010 186 aa11.36□□□□□ -0.59
COL4A3-202ENST00000396578 HAMPP81172 84 aa11.36□□□□□ -0.59
COL4A3-202ENST00000396578 DAZ1Q9NQZ3 744 aaKnown RBP11.36□□□□□ -0.59
COL4A3-202ENST00000396578 TRBV25-1A0A075B6N4 114 aa11.36□□□□□ -0.59
COL4A3-202ENST00000396578 PRSS46E5RG02 174 aa11.36□□□□□ -0.59
COL4A3-202ENST00000396578 PLXNA2O75051 1894 aa11.36□□□□□ -0.59
COL4A3-202ENST00000396578 K7EP13 123 aa11.36□□□□□ -0.59
COL4A3-202ENST00000396578 GAS1P54826 345 aa11.36□□□□□ -0.59
COL4A3-202ENST00000396578 OR11H6Q8NGC7 330 aa11.35□□□□□ -0.59
COL4A3-202ENST00000396578 TRAV25A0A0B4J276 109 aa11.35□□□□□ -0.59
COL4A3-202ENST00000396578 GGNQ86UU5 652 aa11.35□□□□□ -0.59
COL4A3-202ENST00000396578 CEND1Q8N111 149 aa11.35□□□□□ -0.59
COL4A3-202ENST00000396578 H3BUX3 64 aa11.35□□□□□ -0.59
COL4A3-202ENST00000396578 THSD7AQ9UPZ6 1657 aa11.35□□□□□ -0.59
COL4A3-202ENST00000396578 IGHV1-24A0A0C4DH33 117 aa11.35□□□□□ -0.59
COL4A3-202ENST00000396578 IGHG4P01861 327 aa11.35□□□□□ -0.59
COL4A3-202ENST00000396578 SLC25A16P16260 332 aa11.35□□□□□ -0.59
COL4A3-202ENST00000396578 C18orf32Q8TCD1 76 aa11.35□□□□□ -0.59
COL4A3-202ENST00000396578 USF3Q68DE3 2245 aa11.35□□□□□ -0.59
COL4A3-202ENST00000396578 THAP8Q8NA92 274 aa11.34□□□□□ -0.59
COL4A3-202ENST00000396578 IGFL4Q6B9Z1 124 aa11.34□□□□□ -0.59
COL4A3-202ENST00000396578 K7EP34 96 aa11.34□□□□□ -0.59
COL4A3-202ENST00000396578 A0A1W2PPM0 123 aa11.34□□□□□ -0.59
COL4A3-202ENST00000396578 RHODO00212 210 aa11.34□□□□□ -0.59
COL4A3-202ENST00000396578 COL4A1P02462 1669 aa11.34□□□□□ -0.59
COL4A3-202ENST00000396578 Q8N8P6 123 aa11.34□□□□□ -0.59
COL4A3-202ENST00000396578 SHANK2-AS3Q9BTD1 123 aa11.34□□□□□ -0.59
COL4A3-202ENST00000396578 RHPN1-AS1Q9BWJ2 59 aa11.34□□□□□ -0.59
COL4A3-202ENST00000396578 MSRB2Q9Y3D2 182 aa11.34□□□□□ -0.59
COL4A3-202ENST00000396578 EFNA4P52798 201 aa11.34□□□□□ -0.59
COL4A3-202ENST00000396578 LINC00479Q96M42 142 aa11.34□□□□□ -0.59
COL4A3-202ENST00000396578 TRAV13-2A0A0B4J235 113 aa11.34□□□□□ -0.59
COL4A3-202ENST00000396578 RNASE2P10153 161 aaKnown RBP11.34□□□□□ -0.59
COL4A3-202ENST00000396578 ADCYAP1P18509 176 aa11.34□□□□□ -0.59
COL4A3-202ENST00000396578 PFN2P35080 140 aa11.34□□□□□ -0.59
COL4A3-202ENST00000396578 PRSS57Q6UWY2 283 aa11.34□□□□□ -0.59
COL4A3-202ENST00000396578 RNF166Q96A37 237 aaPredicted RBP11.34□□□□□ -0.59
COL4A3-202ENST00000396578 PRO1854Q9UHT4 67 aa11.34□□□□□ -0.59
COL4A3-202ENST00000396578 COX8AP10176 69 aa11.33□□□□□ -0.6
COL4A3-202ENST00000396578 ZNF492Q9P255 531 aa11.33□□□□□ -0.6
COL4A3-202ENST00000396578 GAGE12HA6NDE8 117 aa11.33□□□□□ -0.6
COL4A3-202ENST00000396578 hADV29S1A0JD25 119 aa11.33□□□□□ -0.6
COL4A3-202ENST00000396578 Q6P435 159 aa11.33□□□□□ -0.6
COL4A3-202ENST00000396578 C8orf49Q96NF6 230 aa11.33□□□□□ -0.6
COL4A3-202ENST00000396578 PINLYPA6NC86 204 aa11.33□□□□□ -0.6
COL4A3-202ENST00000396578 DKK1O94907 266 aa11.33□□□□□ -0.6
COL4A3-202ENST00000396578 DEFB130BP0DP73 79 aa11.33□□□□□ -0.6
COL4A3-202ENST00000396578 DEFB130AP0DP74 79 aa11.33□□□□□ -0.6
COL4A3-202ENST00000396578 Q6ZS49 121 aa11.33□□□□□ -0.6
COL4A3-202ENST00000396578 ANKRD29Q8N6D5 301 aa11.33□□□□□ -0.6
COL4A3-202ENST00000396578 TRAV12-1A0A0B4J245 112 aa11.32□□□□□ -0.6
COL4A3-202ENST00000396578 PNRC2Q9NPJ4 139 aaKnown RBP11.32□□□□□ -0.6
COL4A3-202ENST00000396578 PFN1P07737 140 aaKnown RBP11.32□□□□□ -0.6
COL4A3-202ENST00000396578 FAM104BQ5XKR9 115 aa11.32□□□□□ -0.6
COL4A3-202ENST00000396578 DEFB121Q5J5C9 76 aa11.32□□□□□ -0.6
COL4A3-202ENST00000396578 C2orf66Q6UXQ4 117 aa11.32□□□□□ -0.6
COL4A3-202ENST00000396578 CRLF1O75462 422 aa11.32□□□□□ -0.6
COL4A3-202ENST00000396578 C20orf204Q6ZNR8 217 aa11.32□□□□□ -0.6
COL4A3-202ENST00000396578 GAFA1Q96PS6 74 aa11.32□□□□□ -0.6
COL4A3-202ENST00000396578 B4DSR2 109 aa11.31□□□□□ -0.6
COL4A3-202ENST00000396578 PLXNB1O43157 2135 aa11.31□□□□□ -0.6
COL4A3-202ENST00000396578 WDR90Q96KV7 1748 aa11.31□□□□□ -0.6
COL4A3-202ENST00000396578 HLA-DMBP28068 263 aa11.31□□□□□ -0.6
COL4A3-202ENST00000396578 SCRT2Q9NQ03 307 aa11.31□□□□□ -0.6
COL4A3-202ENST00000396578 TNCP24821 2201 aa11.31□□□□□ -0.6
COL4A3-202ENST00000396578 TMEM213A2RRL7 107 aa11.31□□□□□ -0.6
COL4A3-202ENST00000396578 NDUFB8O95169 186 aa11.31□□□□□ -0.6
COL4A3-202ENST00000396578 RBM3P98179 157 aaKnown RBP11.31□□□□□ -0.6
COL4A3-202ENST00000396578 ETDBQ3ZM63 59 aa11.31□□□□□ -0.6
COL4A3-202ENST00000396578 AZU1P20160 251 aa11.31□□□□□ -0.6
COL4A3-202ENST00000396578 QRFPP83859 136 aa11.31□□□□□ -0.6
COL4A3-202ENST00000396578 EGR2P11161 476 aaPredicted RBP11.3□□□□□ -0.6
COL4A3-202ENST00000396578 MST1P26927 711 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms