RNA–Protein interactions for RNA: ENST00000396308.3

VAMP1-202, Transcript of vesicle associated membrane protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VAMP1, Length 1,113 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-202ENST00000396308 LINC00482Q8N8I6 264 aa11.65□□□□□ -0.54
VAMP1-202ENST00000396308 ZNF738Q8NE65 137 aa11.65□□□□□ -0.54
VAMP1-202ENST00000396308 OR2K2Q8NGT1 345 aa11.65□□□□□ -0.54
VAMP1-202ENST00000396308 MCRIP2Q9BUT9 160 aaKnown RBP11.65□□□□□ -0.54
VAMP1-202ENST00000396308 MS4A6AQ9H2W1 248 aa11.65□□□□□ -0.54
VAMP1-202ENST00000396308 PARLQ9H300 379 aa11.65□□□□□ -0.54
VAMP1-202ENST00000396308 JMJD1CQ15652 2540 aa11.64□□□□□ -0.55
VAMP1-202ENST00000396308 OR4C46A6NHA9 309 aa11.64□□□□□ -0.55
VAMP1-202ENST00000396308 FBLL1A6NHQ2 334 aaKnown RBP11.64□□□□□ -0.55
VAMP1-202ENST00000396308 CD33P20138 364 aa11.64□□□□□ -0.55
VAMP1-202ENST00000396308 TFPI2P48307 235 aa11.64□□□□□ -0.55
VAMP1-202ENST00000396308 GNG5P63218 68 aa11.64□□□□□ -0.55
VAMP1-202ENST00000396308 WFDC3Q8IUB2 231 aa11.64□□□□□ -0.55
VAMP1-202ENST00000396308 FMC1Q96HJ9 113 aa11.64□□□□□ -0.55
VAMP1-202ENST00000396308 CUBNO60494 3623 aa11.64□□□□□ -0.55
VAMP1-202ENST00000396308 TSPAN4O14817 238 aa11.63□□□□□ -0.55
VAMP1-202ENST00000396308 PSG3Q16557 428 aa11.63□□□□□ -0.55
VAMP1-202ENST00000396308 DEFB114Q30KQ6 69 aa11.63□□□□□ -0.55
VAMP1-202ENST00000396308 LCN12Q6JVE5 192 aa11.63□□□□□ -0.55
VAMP1-202ENST00000396308 ADAMTSL5Q6ZMM2 481 aa11.63□□□□□ -0.55
VAMP1-202ENST00000396308 GOLT1AQ6ZVE7 132 aa11.63□□□□□ -0.55
VAMP1-202ENST00000396308 LINC00052Q96N35 136 aa11.63□□□□□ -0.55
VAMP1-202ENST00000396308 SPAG8Q99932 426 aaPredicted RBP11.63□□□□□ -0.55
VAMP1-202ENST00000396308 SELENOKQ9Y6D0 94 aa11.63□□□□□ -0.55
VAMP1-202ENST00000396308 DIRC3C9JPN6 131 aa11.62□□□□□ -0.55
VAMP1-202ENST00000396308 APOC3P02656 99 aa11.62□□□□□ -0.55
VAMP1-202ENST00000396308 RPL35P42766 123 aaKnown RBP11.62□□□□□ -0.55
VAMP1-202ENST00000396308 GNG4P50150 75 aa11.62□□□□□ -0.55
VAMP1-202ENST00000396308 INSL3P51460 131 aa11.62□□□□□ -0.55
VAMP1-202ENST00000396308 TAS2R60P59551 318 aa11.62□□□□□ -0.55
VAMP1-202ENST00000396308 CD300EQ496F6 205 aaPredicted RBP11.62□□□□□ -0.55
VAMP1-202ENST00000396308 C9orf66Q5T8R8 295 aa11.62□□□□□ -0.55
VAMP1-202ENST00000396308 TMEM61Q8N0U2 210 aa11.62□□□□□ -0.55
VAMP1-202ENST00000396308 SVBPQ8N300 66 aa11.62□□□□□ -0.55
VAMP1-202ENST00000396308 RNF182Q8N6D2 247 aa11.62□□□□□ -0.55
VAMP1-202ENST00000396308 C2CD4CQ8TF44 421 aa11.62□□□□□ -0.55
VAMP1-202ENST00000396308 DCANP1Q8TF63 244 aa11.62□□□□□ -0.55
VAMP1-202ENST00000396308 NAT8Q9UHE5 227 aa11.62□□□□□ -0.55
VAMP1-202ENST00000396308 CARHSP1Q9Y2V2 147 aaKnown RBP11.62□□□□□ -0.55
VAMP1-202ENST00000396308 K7EQG2 157 aa11.61□□□□□ -0.55
VAMP1-202ENST00000396308 M0R3E3 92 aa11.61□□□□□ -0.55
VAMP1-202ENST00000396308 SOCS3O14543 225 aa11.61□□□□□ -0.55
VAMP1-202ENST00000396308 PNRC1Q12796 327 aaPredicted RBP11.61□□□□□ -0.55
VAMP1-202ENST00000396308 GUCA2BQ16661 112 aa11.61□□□□□ -0.55
VAMP1-202ENST00000396308 TMEM183BQ1AE95 376 aa11.61□□□□□ -0.55
VAMP1-202ENST00000396308 TMEM241Q24JQ0 296 aa11.61□□□□□ -0.55
VAMP1-202ENST00000396308 TMEM75Q8N9X5 138 aa11.61□□□□□ -0.55
VAMP1-202ENST00000396308 OR10J6PQ8NGY7 276 aa11.61□□□□□ -0.55
VAMP1-202ENST00000396308 NDFIP1Q9BT67 221 aa11.61□□□□□ -0.55
VAMP1-202ENST00000396308 GPR61Q9BZJ8 451 aa11.61□□□□□ -0.55
VAMP1-202ENST00000396308 FBN1P35555 2871 aaKnown RBP11.6□□□□□ -0.55
VAMP1-202ENST00000396308 TRAV8-2A0A0B4J237 113 aa11.6□□□□□ -0.55
VAMP1-202ENST00000396308 RBAKDNA6NC62 111 aa11.6□□□□□ -0.55
VAMP1-202ENST00000396308 C9JCJ5 164 aa11.6□□□□□ -0.55
VAMP1-202ENST00000396308 M0R036 132 aa11.6□□□□□ -0.55
VAMP1-202ENST00000396308 SNAPINO95295 136 aa11.6□□□□□ -0.55
VAMP1-202ENST00000396308 ADCYAP1P18509 176 aa11.6□□□□□ -0.55
VAMP1-202ENST00000396308 HLA-DMBP28068 263 aa11.6□□□□□ -0.55
VAMP1-202ENST00000396308 IGFL4Q6B9Z1 124 aa11.6□□□□□ -0.55
VAMP1-202ENST00000396308 SPATA3Q8NHX4 192 aa11.6□□□□□ -0.55
VAMP1-202ENST00000396308 TVP23CQ96ET8 276 aa11.6□□□□□ -0.55
VAMP1-202ENST00000396308 DERL1Q9BUN8 251 aa11.6□□□□□ -0.55
VAMP1-202ENST00000396308 IGLV1-51P01701 117 aa11.59□□□□□ -0.55
VAMP1-202ENST00000396308 ZNF688P0C7X2 276 aa11.59□□□□□ -0.55
VAMP1-202ENST00000396308 CMC4P56277 68 aaPredicted RBP11.59□□□□□ -0.55
VAMP1-202ENST00000396308 FLI1Q01543 452 aaPredicted RBP11.59□□□□□ -0.55
VAMP1-202ENST00000396308 CENPWQ5EE01 88 aa11.59□□□□□ -0.55
VAMP1-202ENST00000396308 PSMG4Q5JS54 123 aa11.59□□□□□ -0.55
VAMP1-202ENST00000396308 C10orf91Q5T1B1 145 aa11.59□□□□□ -0.55
VAMP1-202ENST00000396308 TMEM78Q5T7P6 136 aa11.59□□□□□ -0.55
VAMP1-202ENST00000396308 SMIM12Q96EX1 92 aa11.59□□□□□ -0.55
VAMP1-202ENST00000396308 BIN3Q9NQY0 253 aa11.59□□□□□ -0.55
VAMP1-202ENST00000396308 IGKV2-40A0A087WW87 121 aaPredicted RBP11.58□□□□□ -0.56
VAMP1-202ENST00000396308 IGKV2D-40P01614 121 aaPredicted RBP11.58□□□□□ -0.56
VAMP1-202ENST00000396308 ADIRFQ15847 76 aa11.58□□□□□ -0.56
VAMP1-202ENST00000396308 EBLN2Q6P2I7 272 aa11.58□□□□□ -0.56
VAMP1-202ENST00000396308 Q86TA4 180 aa11.58□□□□□ -0.56
VAMP1-202ENST00000396308 KLF12Q9Y4X4 402 aa11.58□□□□□ -0.56
VAMP1-202ENST00000396308 LY96Q9Y6Y9 160 aa11.58□□□□□ -0.56
VAMP1-202ENST00000396308 WNK1Q9H4A3 2382 aa11.58□□□□□ -0.56
VAMP1-202ENST00000396308 COL6A5A8TX70 2615 aa11.57□□□□□ -0.56
VAMP1-202ENST00000396308 TRAV34A0A0B4J273 112 aa11.57□□□□□ -0.56
VAMP1-202ENST00000396308 TRBV6-1A0A0K0K1D8 114 aa11.57□□□□□ -0.56
VAMP1-202ENST00000396308 ZNF705FA8MVS1 300 aaPredicted RBP11.57□□□□□ -0.56
VAMP1-202ENST00000396308 PRNTQ86SH4 94 aa11.57□□□□□ -0.56
VAMP1-202ENST00000396308 BAGE2Q86Y30 109 aa11.57□□□□□ -0.56
VAMP1-202ENST00000396308 PSG8Q9UQ74 426 aa11.57□□□□□ -0.56
VAMP1-202ENST00000396308 CT45A10P0DMU9 189 aa11.56□□□□□ -0.56
VAMP1-202ENST00000396308 MGST1P10620 155 aaKnown RBP11.56□□□□□ -0.56
VAMP1-202ENST00000396308 SAPCD1Q5SSQ6 148 aa11.56□□□□□ -0.56
VAMP1-202ENST00000396308 C20orf173Q96LM9 149 aa11.56□□□□□ -0.56
VAMP1-202ENST00000396308 SDF2L1Q9HCN8 221 aa11.56□□□□□ -0.56
VAMP1-202ENST00000396308 PPP1R14DQ9NXH3 145 aa11.56□□□□□ -0.56
VAMP1-202ENST00000396308 ZFP30Q9Y2G7 519 aa11.56□□□□□ -0.56
VAMP1-202ENST00000396308 B4DEV8 164 aa11.55□□□□□ -0.56
VAMP1-202ENST00000396308 DUSP14O95147 198 aaKnown RBP11.55□□□□□ -0.56
VAMP1-202ENST00000396308 LTAP01374 205 aa11.55□□□□□ -0.56
VAMP1-202ENST00000396308 HIST1H1AQ02539 215 aaPredicted RBP11.55□□□□□ -0.56
VAMP1-202ENST00000396308 RHEBQ15382 184 aa11.55□□□□□ -0.56
VAMP1-202ENST00000396308 OR8A1Q8NGG7 326 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 187.8 ms