RNA–Protein interactions for RNA: ENST00000395859.2

VCPKMT-201, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best) BASIC

Gene VCPKMT, Length 795 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-201ENST00000395859 CLINT1Q14677 625 aa9.36□□□□□ -0.91
VCPKMT-201ENST00000395859 GNPNAT1Q96EK6 184 aaPredicted RBP9.36□□□□□ -0.91
VCPKMT-201ENST00000395859 SAT2Q96F10 170 aaPredicted RBP9.36□□□□□ -0.91
VCPKMT-201ENST00000395859 UHRF2Q96PU4 802 aa9.36□□□□□ -0.91
VCPKMT-201ENST00000395859 SAV1Q9H4B6 383 aaPredicted RBP9.36□□□□□ -0.91
VCPKMT-201ENST00000395859 NRN1Q9NPD7 142 aa9.36□□□□□ -0.91
VCPKMT-201ENST00000395859 CYTL1Q9NRR1 136 aa9.36□□□□□ -0.91
VCPKMT-201ENST00000395859 PSENENQ9NZ42 101 aa9.36□□□□□ -0.91
VCPKMT-201ENST00000395859 LINC00862A6NCI5 91 aa9.35□□□□□ -0.91
VCPKMT-201ENST00000395859 FNDC10F2Z333 226 aa9.35□□□□□ -0.91
VCPKMT-201ENST00000395859 IGKV1-17P01599 117 aa9.35□□□□□ -0.91
VCPKMT-201ENST00000395859 PRM2P04554 102 aa9.35□□□□□ -0.91
VCPKMT-201ENST00000395859 ATP5G1P05496 136 aa9.35□□□□□ -0.91
VCPKMT-201ENST00000395859 ATP5G3P48201 142 aa9.35□□□□□ -0.91
VCPKMT-201ENST00000395859 PAX9P55771 341 aa9.35□□□□□ -0.91
VCPKMT-201ENST00000395859 TMEM14EPQ6UXP3 125 aa9.35□□□□□ -0.91
VCPKMT-201ENST00000395859 OR1S2Q8NGQ3 325 aa9.35□□□□□ -0.91
VCPKMT-201ENST00000395859 DTD1Q8TEA8 209 aa9.35□□□□□ -0.91
VCPKMT-201ENST00000395859 ENY2Q9NPA8 101 aa9.35□□□□□ -0.91
VCPKMT-201ENST00000395859 STRAPQ9Y3F4 350 aaKnown RBP9.35□□□□□ -0.91
VCPKMT-201ENST00000395859 UMAD1C9J7I0 102 aa9.34□□□□□ -0.91
VCPKMT-201ENST00000395859 SCGB2A1O75556 95 aa9.34□□□□□ -0.91
VCPKMT-201ENST00000395859 OXTP01178 125 aa9.34□□□□□ -0.91
VCPKMT-201ENST00000395859 IGKV3-20P01619 116 aa9.34□□□□□ -0.91
VCPKMT-201ENST00000395859 DEFB130BP0DP73 79 aa9.34□□□□□ -0.91
VCPKMT-201ENST00000395859 DEFB130AP0DP74 79 aa9.34□□□□□ -0.91
VCPKMT-201ENST00000395859 S100A1P23297 94 aa9.34□□□□□ -0.91
VCPKMT-201ENST00000395859 FOXI2Q6ZQN5 318 aa9.34□□□□□ -0.91
VCPKMT-201ENST00000395859 ATP5SQ99766 215 aa9.34□□□□□ -0.91
VCPKMT-201ENST00000395859 RBKSQ9H477 322 aa9.34□□□□□ -0.91
VCPKMT-201ENST00000395859 FNDC4Q9H6D8 234 aaPredicted RBP9.34□□□□□ -0.91
VCPKMT-201ENST00000395859 CBY3A6NI87 242 aa9.33□□□□□ -0.92
VCPKMT-201ENST00000395859 CEBPZOSA8MTT3 80 aa9.33□□□□□ -0.92
VCPKMT-201ENST00000395859 A8MTW9 85 aa9.33□□□□□ -0.92
VCPKMT-201ENST00000395859 MPDU1O75352 247 aa9.33□□□□□ -0.92
VCPKMT-201ENST00000395859 CLN5O75503 358 aa9.33□□□□□ -0.92
VCPKMT-201ENST00000395859 PLA2G1BP04054 148 aaKnown RBP9.33□□□□□ -0.92
VCPKMT-201ENST00000395859 TSPOP30536 169 aa9.33□□□□□ -0.92
VCPKMT-201ENST00000395859 HTR2BP41595 481 aa9.33□□□□□ -0.92
VCPKMT-201ENST00000395859 KRTAP10-4P60372 401 aaPredicted RBP9.33□□□□□ -0.92
VCPKMT-201ENST00000395859 RAB11AP62491 216 aa9.33□□□□□ -0.92
VCPKMT-201ENST00000395859 DPPA3Q6W0C5 159 aa9.33□□□□□ -0.92
VCPKMT-201ENST00000395859 IGSF23A1L1A6 192 aa9.32□□□□□ -0.92
VCPKMT-201ENST00000395859 FAM24AA6NFZ4 105 aa9.32□□□□□ -0.92
VCPKMT-201ENST00000395859 BLOC1S1P78537 153 aa9.32□□□□□ -0.92
VCPKMT-201ENST00000395859 PSG9Q00887 426 aa9.32□□□□□ -0.92
VCPKMT-201ENST00000395859 IZUMO4Q1ZYL8 232 aa9.32□□□□□ -0.92
VCPKMT-201ENST00000395859 OR10P1Q8NGE3 313 aa9.32□□□□□ -0.92
VCPKMT-201ENST00000395859 OR5C1Q8NGR4 320 aa9.32□□□□□ -0.92
VCPKMT-201ENST00000395859 PSMG3Q9BT73 122 aaPredicted RBP9.32□□□□□ -0.92
VCPKMT-201ENST00000395859 MAGT1Q9H0U3 335 aa9.32□□□□□ -0.92
VCPKMT-201ENST00000395859 FAM30AQ9NZY2 134 aa9.32□□□□□ -0.92
VCPKMT-201ENST00000395859 TIMM9Q9Y5J7 89 aa9.32□□□□□ -0.92
VCPKMT-201ENST00000395859 TNFRSF18Q9Y5U5 241 aa9.32□□□□□ -0.92
VCPKMT-201ENST00000395859 BUB3O43684 328 aa9.31□□□□□ -0.92
VCPKMT-201ENST00000395859 CFDP00746 253 aaPredicted RBP9.31□□□□□ -0.92
VCPKMT-201ENST00000395859 RNASE2P10153 161 aaKnown RBP9.31□□□□□ -0.92
VCPKMT-201ENST00000395859 SULT1A2P50226 295 aa9.31□□□□□ -0.92
VCPKMT-201ENST00000395859 SERF2P84101 59 aa9.31□□□□□ -0.92
VCPKMT-201ENST00000395859 NHLH2Q02577 135 aa9.31□□□□□ -0.92
VCPKMT-201ENST00000395859 VWC2Q2TAL6 325 aa9.31□□□□□ -0.92
VCPKMT-201ENST00000395859 SPINK9Q5DT21 86 aa9.31□□□□□ -0.92
VCPKMT-201ENST00000395859 RPL7L1Q6DKI1 246 aaKnown RBP9.31□□□□□ -0.92
VCPKMT-201ENST00000395859 AMTNQ6UX39 209 aa9.31□□□□□ -0.92
VCPKMT-201ENST00000395859 EIF4E3Q8N5X7 224 aaKnown RBP9.31□□□□□ -0.92
VCPKMT-201ENST00000395859 OR4X1Q8NH49 305 aa9.31□□□□□ -0.92
VCPKMT-201ENST00000395859 RXFP4Q8TDU9 374 aa9.31□□□□□ -0.92
VCPKMT-201ENST00000395859 NARS2Q96I59 477 aaKnown RBP9.31□□□□□ -0.92
VCPKMT-201ENST00000395859 HEYLQ9NQ87 328 aaPredicted RBP9.31□□□□□ -0.92
VCPKMT-201ENST00000395859 KCNIP2Q9NS61 270 aa9.31□□□□□ -0.92
VCPKMT-201ENST00000395859 PFDN2Q9UHV9 154 aa9.31□□□□□ -0.92
VCPKMT-201ENST00000395859 TRAV30A0A087WSZ9 112 aa9.3□□□□□ -0.92
VCPKMT-201ENST00000395859 SOCS3O14543 225 aa9.3□□□□□ -0.92
VCPKMT-201ENST00000395859 CRXO43186 299 aaPredicted RBP9.3□□□□□ -0.92
VCPKMT-201ENST00000395859 NMBP08949 121 aa9.3□□□□□ -0.92
VCPKMT-201ENST00000395859 OPRK1P41145 380 aa9.3□□□□□ -0.92
VCPKMT-201ENST00000395859 SPANXN5Q5MJ07 72 aa9.3□□□□□ -0.92
VCPKMT-201ENST00000395859 SPATA31B1PQ5VZV4 182 aa9.3□□□□□ -0.92
VCPKMT-201ENST00000395859 ALKAL2Q6UX46 152 aa9.3□□□□□ -0.92
VCPKMT-201ENST00000395859 SCGB1C1Q8TD33 95 aa9.3□□□□□ -0.92
VCPKMT-201ENST00000395859 RNF125Q96EQ8 232 aa9.3□□□□□ -0.92
VCPKMT-201ENST00000395859 IGF2BP2-AS1Q96M15 143 aa9.3□□□□□ -0.92
VCPKMT-201ENST00000395859 ZNF705GA8MUZ8 300 aaPredicted RBP9.29□□□□□ -0.92
VCPKMT-201ENST00000395859 MBP02144 154 aa9.29□□□□□ -0.92
VCPKMT-201ENST00000395859 AZU1P20160 251 aa9.29□□□□□ -0.92
VCPKMT-201ENST00000395859 MLANAQ16655 118 aa9.29□□□□□ -0.92
VCPKMT-201ENST00000395859 BSXQ3C1V8 233 aa9.29□□□□□ -0.92
VCPKMT-201ENST00000395859 TIGITQ495A1 244 aa9.29□□□□□ -0.92
VCPKMT-201ENST00000395859 C2orf83Q53S99 150 aa9.29□□□□□ -0.92
VCPKMT-201ENST00000395859 SIGLEC15Q6ZMC9 328 aa9.29□□□□□ -0.92
VCPKMT-201ENST00000395859 OR4B1Q8NGF8 309 aa9.29□□□□□ -0.92
VCPKMT-201ENST00000395859 TMEM147Q9BVK8 224 aa9.29□□□□□ -0.92
VCPKMT-201ENST00000395859 TRAV26-1A0A087WT03 109 aa9.28□□□□□ -0.92
VCPKMT-201ENST00000395859 A0A0J9YX75 114 aa9.28□□□□□ -0.92
VCPKMT-201ENST00000395859 PMS2P5A8MQ11 134 aa9.28□□□□□ -0.92
VCPKMT-201ENST00000395859 TEX46H3BTG2 121 aa9.28□□□□□ -0.92
VCPKMT-201ENST00000395859 CST7O76096 145 aa9.28□□□□□ -0.92
VCPKMT-201ENST00000395859 SLC38A11Q08AI6 406 aa9.28□□□□□ -0.92
VCPKMT-201ENST00000395859 FAM78BQ5VT40 261 aa9.28□□□□□ -0.92
VCPKMT-201ENST00000395859 UQCC3Q6UW78 93 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 115.3 ms