RNA–Protein interactions for RNA: ENST00000395727.6

PTPN20-208, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 790 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-208ENST00000395727 RSG1Q9BU20 258 aa4.36□□□□□ -1.71
PTPN20-208ENST00000395727 SLC35B3Q9H1N7 401 aa4.36□□□□□ -1.71
PTPN20-208ENST00000395727 ARV1Q9H2C2 271 aa4.36□□□□□ -1.71
PTPN20-208ENST00000395727 NUDT15Q9NV35 164 aa4.36□□□□□ -1.71
PTPN20-208ENST00000395727 AGRNO00468 2067 aa4.36□□□□□ -1.71
PTPN20-208ENST00000395727 SMCO3A2RU48 225 aa4.35□□□□□ -1.71
PTPN20-208ENST00000395727 LYRM9A8MSI8 78 aa4.35□□□□□ -1.71
PTPN20-208ENST00000395727 F6UB75 175 aa4.35□□□□□ -1.71
PTPN20-208ENST00000395727 BOLA2-SMG1P6H3BVE0 249 aa4.35□□□□□ -1.71
PTPN20-208ENST00000395727 GOSR2O14653 212 aa4.35□□□□□ -1.71
PTPN20-208ENST00000395727 AGPAT2O15120 278 aa4.35□□□□□ -1.71
PTPN20-208ENST00000395727 INSP01308 110 aa4.35□□□□□ -1.71
PTPN20-208ENST00000395727 IGKV3-20P01619 116 aa4.35□□□□□ -1.71
PTPN20-208ENST00000395727 DEFB1P60022 68 aa4.35□□□□□ -1.71
PTPN20-208ENST00000395727 ARL16Q0P5N6 197 aa4.35□□□□□ -1.71
PTPN20-208ENST00000395727 ASAH1Q13510 395 aa4.35□□□□□ -1.71
PTPN20-208ENST00000395727 RAB31Q13636 194 aa4.35□□□□□ -1.71
PTPN20-208ENST00000395727 GUK1Q16774 197 aa4.35□□□□□ -1.71
PTPN20-208ENST00000395727 RRN3P1Q2M238 152 aa4.35□□□□□ -1.71
PTPN20-208ENST00000395727 BPIFA4PQ86YQ2 179 aa4.35□□□□□ -1.71
PTPN20-208ENST00000395727 C12orf45Q8N5I9 185 aaPredicted RBP4.35□□□□□ -1.71
PTPN20-208ENST00000395727 OR11H7Q8NGC8 314 aa4.35□□□□□ -1.71
PTPN20-208ENST00000395727 OR8A1Q8NGG7 326 aa4.35□□□□□ -1.71
PTPN20-208ENST00000395727 C2orf50Q96LR7 162 aa4.35□□□□□ -1.71
PTPN20-208ENST00000395727 UHRF2Q96PU4 802 aa4.35□□□□□ -1.71
PTPN20-208ENST00000395727 PFDN5Q99471 154 aa4.35□□□□□ -1.71
PTPN20-208ENST00000395727 NIPSNAP3BQ9BS92 247 aa4.35□□□□□ -1.71
PTPN20-208ENST00000395727 NDUFAF3Q9BU61 184 aa4.35□□□□□ -1.71
PTPN20-208ENST00000395727 ARL6Q9H0F7 186 aa4.35□□□□□ -1.71
PTPN20-208ENST00000395727 ZNF331Q9NQX6 463 aaPredicted RBP4.35□□□□□ -1.71
PTPN20-208ENST00000395727 LYRM2Q9NU23 88 aaPredicted RBP4.35□□□□□ -1.71
PTPN20-208ENST00000395727 GSKIPQ9P0R6 139 aa4.35□□□□□ -1.71
PTPN20-208ENST00000395727 LINC00854A0A1B0GVQ3 168 aa4.34□□□□□ -1.71
PTPN20-208ENST00000395727 L7N2F9 121 aa4.34□□□□□ -1.71
PTPN20-208ENST00000395727 CCSO14618 274 aa4.34□□□□□ -1.71
PTPN20-208ENST00000395727 MPDU1O75352 247 aa4.34□□□□□ -1.71
PTPN20-208ENST00000395727 OR5G3P0C626 314 aa4.34□□□□□ -1.71
PTPN20-208ENST00000395727 IGLC2P0DOY2 106 aa4.34□□□□□ -1.71
PTPN20-208ENST00000395727 PVALBP20472 110 aaPredicted RBP4.34□□□□□ -1.71
PTPN20-208ENST00000395727 S100A11P31949 105 aa4.34□□□□□ -1.71
PTPN20-208ENST00000395727 RPL29P47914 159 aaKnown RBP4.34□□□□□ -1.71
PTPN20-208ENST00000395727 CAMLGP49069 296 aa4.34□□□□□ -1.71
PTPN20-208ENST00000395727 SULT1A1P50225 295 aa4.34□□□□□ -1.71
PTPN20-208ENST00000395727 RRAS2P62070 204 aaPredicted RBP4.34□□□□□ -1.71
PTPN20-208ENST00000395727 VAMP2P63027 116 aa4.34□□□□□ -1.71
PTPN20-208ENST00000395727 HBG1P69891 147 aa4.34□□□□□ -1.71
PTPN20-208ENST00000395727 HBG2P69892 147 aa4.34□□□□□ -1.71
PTPN20-208ENST00000395727 SLC38A11Q08AI6 406 aa4.34□□□□□ -1.71
PTPN20-208ENST00000395727 OPCMLQ14982 345 aa4.34□□□□□ -1.71
PTPN20-208ENST00000395727 PSG3Q16557 428 aa4.34□□□□□ -1.71
PTPN20-208ENST00000395727 ATP6V1FQ16864 119 aa4.34□□□□□ -1.71
PTPN20-208ENST00000395727 RNF212Q495C1 297 aa4.34□□□□□ -1.71
PTPN20-208ENST00000395727 FAM222AQ5U5X8 452 aa4.34□□□□□ -1.71
PTPN20-208ENST00000395727 MZT2BQ6NZ67 158 aa4.34□□□□□ -1.71
PTPN20-208ENST00000395727 ZNF493Q6ZR52 646 aa4.34□□□□□ -1.71
PTPN20-208ENST00000395727 LINC00336Q6ZUF6 198 aa4.34□□□□□ -1.71
PTPN20-208ENST00000395727 LINC00305Q7Z4B0 112 aa4.34□□□□□ -1.71
PTPN20-208ENST00000395727 RNF182Q8N6D2 247 aa4.34□□□□□ -1.71
PTPN20-208ENST00000395727 POM121L12Q8N7R1 296 aa4.34□□□□□ -1.71
PTPN20-208ENST00000395727 OR1L4Q8NGR5 311 aa4.34□□□□□ -1.71
PTPN20-208ENST00000395727 TMEM37Q8WXS4 190 aa4.34□□□□□ -1.71
PTPN20-208ENST00000395727 RPL36ALQ969Q0 106 aaKnown RBP4.34□□□□□ -1.71
PTPN20-208ENST00000395727 MRPL53Q96EL3 112 aaKnown RBP4.34□□□□□ -1.71
PTPN20-208ENST00000395727 SAT2Q96F10 170 aaPredicted RBP4.34□□□□□ -1.71
PTPN20-208ENST00000395727 ODF3Q96PU9 254 aa4.34□□□□□ -1.71
PTPN20-208ENST00000395727 MGST2Q99735 147 aa4.34□□□□□ -1.71
PTPN20-208ENST00000395727 ARPC5LQ9BPX5 153 aa4.34□□□□□ -1.71
PTPN20-208ENST00000395727 UQCC1Q9NVA1 299 aa4.34□□□□□ -1.71
PTPN20-208ENST00000395727 WDR83OSQ9Y284 106 aa4.34□□□□□ -1.71
PTPN20-208ENST00000395727 YTHDF2Q9Y5A9 579 aaKnown RBP4.34□□□□□ -1.71
PTPN20-208ENST00000395727 PXMP4Q9Y6I8 212 aa4.34□□□□□ -1.71
PTPN20-208ENST00000395727 PLECQ15149 4684 aaKnown RBP4.33□□□□□ -1.72
PTPN20-208ENST00000395727 TRAV6A0A075B6T7 132 aa4.33□□□□□ -1.72
PTPN20-208ENST00000395727 IGHV3OR16-12A0A075B7B8 117 aa4.33□□□□□ -1.72
PTPN20-208ENST00000395727 FAM240BA0A1B0GVZ2 78 aa4.33□□□□□ -1.72
PTPN20-208ENST00000395727 PLAC8L1A1L4L8 177 aa4.33□□□□□ -1.72
PTPN20-208ENST00000395727 COX7A2P2O60397 106 aa4.33□□□□□ -1.72
PTPN20-208ENST00000395727 PRAF2O60831 178 aa4.33□□□□□ -1.72
PTPN20-208ENST00000395727 CDKN1BP46527 198 aa4.33□□□□□ -1.72
PTPN20-208ENST00000395727 CAV2P51636 162 aa4.33□□□□□ -1.72
PTPN20-208ENST00000395727 FXYD7P58549 80 aa4.33□□□□□ -1.72
PTPN20-208ENST00000395727 TAS2R60P59551 318 aa4.33□□□□□ -1.72
PTPN20-208ENST00000395727 PDE6HQ13956 83 aa4.33□□□□□ -1.72
PTPN20-208ENST00000395727 SPINK13Q1W4C9 94 aa4.33□□□□□ -1.72
PTPN20-208ENST00000395727 LGALS9BQ3B8N2 356 aa4.33□□□□□ -1.72
PTPN20-208ENST00000395727 C10orf113Q5VZT2 155 aa4.33□□□□□ -1.72
PTPN20-208ENST00000395727 GSG1LQ6UXU4 331 aa4.33□□□□□ -1.72
PTPN20-208ENST00000395727 Q6ZRG5 221 aa4.33□□□□□ -1.72
PTPN20-208ENST00000395727 NRARPQ7Z6K4 114 aa4.33□□□□□ -1.72
PTPN20-208ENST00000395727 STX12Q86Y82 276 aa4.33□□□□□ -1.72
PTPN20-208ENST00000395727 TMEM252Q8N6L7 170 aa4.33□□□□□ -1.72
PTPN20-208ENST00000395727 C15orf53Q8NAA6 179 aa4.33□□□□□ -1.72
PTPN20-208ENST00000395727 ZNF738Q8NE65 137 aa4.33□□□□□ -1.72
PTPN20-208ENST00000395727 SEC22CQ9BRL7 303 aa4.33□□□□□ -1.72
PTPN20-208ENST00000395727 DNAJC4Q9NNZ3 241 aa4.33□□□□□ -1.72
PTPN20-208ENST00000395727 TMEM14CQ9P0S9 112 aa4.33□□□□□ -1.72
PTPN20-208ENST00000395727 LSM5Q9Y4Y9 91 aaKnown RBP4.33□□□□□ -1.72
PTPN20-208ENST00000395727 EPPK1P58107 5090 aaKnown RBP4.32□□□□□ -1.72
PTPN20-208ENST00000395727 IGSF23A1L1A6 192 aa4.32□□□□□ -1.72
PTPN20-208ENST00000395727 C5orf51A6NDU8 294 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms