RNA–Protein interactions for RNA: ENST00000395354.1

LMNB1-202, Transcript of lamin B1, humanhuman

TSL 1 (best) BASIC

Gene LMNB1, Length 1,572 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-202ENST00000395354 CSN1S1P47710 185 aa14.76□□□□□ -0.05
LMNB1-202ENST00000395354 LCNL1Q6ZST4 164 aa14.76□□□□□ -0.05
LMNB1-202ENST00000395354 SRD5A3Q9H8P0 318 aa14.76□□□□□ -0.05
LMNB1-202ENST00000395354 PEF1Q9UBV8 284 aaKnown RBP14.76□□□□□ -0.05
LMNB1-202ENST00000395354 TENM1Q9UKZ4 2725 aa14.75□□□□□ -0.05
LMNB1-202ENST00000395354 DIRC3C9JPN6 131 aa14.75□□□□□ -0.05
LMNB1-202ENST00000395354 TCTEX1D4Q5JR98 221 aa14.75□□□□□ -0.05
LMNB1-202ENST00000395354 IBA57Q5T440 356 aaKnown RBP14.75□□□□□ -0.05
LMNB1-202ENST00000395354 GOLT1AQ6ZVE7 132 aa14.75□□□□□ -0.05
LMNB1-202ENST00000395354 C11orf44Q8N8P7 122 aa14.75□□□□□ -0.05
LMNB1-202ENST00000395354 A0A1W2PPQ1 181 aa14.74□□□□□ -0.05
LMNB1-202ENST00000395354 FBLL1A6NHQ2 334 aaKnown RBP14.74□□□□□ -0.05
LMNB1-202ENST00000395354 ZNF785A8K8V0 405 aa14.74□□□□□ -0.05
LMNB1-202ENST00000395354 RPLP1P05386 114 aaKnown RBP14.74□□□□□ -0.05
LMNB1-202ENST00000395354 CD28P10747 220 aa14.74□□□□□ -0.05
LMNB1-202ENST00000395354 KRTAP10-3P60369 221 aa14.74□□□□□ -0.05
LMNB1-202ENST00000395354 Q86TA4 180 aa14.74□□□□□ -0.05
LMNB1-202ENST00000395354 RNF152Q8N8N0 203 aa14.74□□□□□ -0.05
LMNB1-202ENST00000395354 MYOZ3Q8TDC0 251 aa14.74□□□□□ -0.05
LMNB1-202ENST00000395354 WFDC12Q8WWY7 111 aa14.74□□□□□ -0.05
LMNB1-202ENST00000395354 SLC50A1Q9BRV3 221 aa14.74□□□□□ -0.05
LMNB1-202ENST00000395354 ZNF331Q9NQX6 463 aaPredicted RBP14.74□□□□□ -0.05
LMNB1-202ENST00000395354 IGLV2-11P01706 119 aa14.73□□□□□ -0.05
LMNB1-202ENST00000395354 RPEL1Q2QD12 228 aa14.73□□□□□ -0.05
LMNB1-202ENST00000395354 C16orf54Q6UWD8 224 aa14.73□□□□□ -0.05
LMNB1-202ENST00000395354 TMEM183AQ8IXX5 376 aa14.73□□□□□ -0.05
LMNB1-202ENST00000395354 RNASE7Q9H1E1 156 aaKnown RBP14.73□□□□□ -0.05
LMNB1-202ENST00000395354 ZFP30Q9Y2G7 519 aa14.73□□□□□ -0.05
LMNB1-202ENST00000395354 FAM3BP58499 235 aaPredicted RBP14.73□□□□□ -0.05
LMNB1-202ENST00000395354 PSG3Q16557 428 aa14.73□□□□□ -0.05
LMNB1-202ENST00000395354 ZNF492Q9P255 531 aa14.73□□□□□ -0.05
LMNB1-202ENST00000395354 STAB1Q9NY15 2570 aa14.72□□□□□ -0.05
LMNB1-202ENST00000395354 A0A1W2PS18 150 aa14.72□□□□□ -0.05
LMNB1-202ENST00000395354 APOHP02749 345 aaPredicted RBP14.72□□□□□ -0.05
LMNB1-202ENST00000395354 HIST2H2BDQ6DRA6 164 aa14.72□□□□□ -0.05
LMNB1-202ENST00000395354 UNQ9165/PRO28630Q6UXU0 137 aa14.72□□□□□ -0.05
LMNB1-202ENST00000395354 GPHB5Q86YW7 130 aa14.72□□□□□ -0.05
LMNB1-202ENST00000395354 ZFP82Q8N141 532 aa14.72□□□□□ -0.05
LMNB1-202ENST00000395354 NHLRC2Q8NBF2 726 aa14.72□□□□□ -0.05
LMNB1-202ENST00000395354 GLMPQ8WWB7 406 aa14.72□□□□□ -0.05
LMNB1-202ENST00000395354 GRAMD2BQ96HH9 432 aa14.72□□□□□ -0.05
LMNB1-202ENST00000395354 CLEC5AQ9NY25 188 aa14.72□□□□□ -0.05
LMNB1-202ENST00000395354 K7EMT4 169 aa14.71□□□□□ -0.05
LMNB1-202ENST00000395354 FAM106AQ4KMX7 169 aa14.71□□□□□ -0.05
LMNB1-202ENST00000395354 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa14.71□□□□□ -0.05
LMNB1-202ENST00000395354 C12orf54Q6X4T0 127 aa14.71□□□□□ -0.05
LMNB1-202ENST00000395354 MDFIQ99750 246 aa14.71□□□□□ -0.05
LMNB1-202ENST00000395354 CITED2Q99967 270 aaPredicted RBP14.71□□□□□ -0.05
LMNB1-202ENST00000395354 M0R3E3 92 aa14.7□□□□□ -0.06
LMNB1-202ENST00000395354 ZNF207O43670 478 aaKnown RBP14.7□□□□□ -0.06
LMNB1-202ENST00000395354 MRPL53Q96EL3 112 aaKnown RBP14.7□□□□□ -0.06
LMNB1-202ENST00000395354 UBE2E2Q96LR5 201 aa14.7□□□□□ -0.06
LMNB1-202ENST00000395354 SGK494Q96LW2 274 aa14.7□□□□□ -0.06
LMNB1-202ENST00000395354 PSG8Q9UQ74 426 aa14.7□□□□□ -0.06
LMNB1-202ENST00000395354 ZNF320A2RRD8 509 aa14.69□□□□□ -0.06
LMNB1-202ENST00000395354 ZNF705GA8MUZ8 300 aaPredicted RBP14.69□□□□□ -0.06
LMNB1-202ENST00000395354 GATCO43716 136 aaKnown RBP14.69□□□□□ -0.06
LMNB1-202ENST00000395354 RPL19P84098 196 aaKnown RBP14.69□□□□□ -0.06
LMNB1-202ENST00000395354 KHDC1LQ5JSQ8 128 aa14.69□□□□□ -0.06
LMNB1-202ENST00000395354 PRNTQ86SH4 94 aa14.69□□□□□ -0.06
LMNB1-202ENST00000395354 C3orf56Q8N813 242 aa14.69□□□□□ -0.06
LMNB1-202ENST00000395354 NUDT10Q8NFP7 164 aa14.69□□□□□ -0.06
LMNB1-202ENST00000395354 NUDT11Q96G61 164 aa14.69□□□□□ -0.06
LMNB1-202ENST00000395354 TRAV8-1A0A0A6YYK1 113 aa14.68□□□□□ -0.06
LMNB1-202ENST00000395354 IGHV3-66A0A0C4DH42 116 aa14.68□□□□□ -0.06
LMNB1-202ENST00000395354 SMIM27A0A1W2PRY6 76 aa14.68□□□□□ -0.06
LMNB1-202ENST00000395354 TRGC2P03986 189 aa14.68□□□□□ -0.06
LMNB1-202ENST00000395354 LGALS1P09382 135 aaKnown RBP14.68□□□□□ -0.06
LMNB1-202ENST00000395354 ZNF747Q9BV97 191 aa14.68□□□□□ -0.06
LMNB1-202ENST00000395354 DAZ1Q9NQZ3 744 aaKnown RBP14.68□□□□□ -0.06
LMNB1-202ENST00000395354 TSSC4Q9Y5U2 329 aaPredicted RBP14.68□□□□□ -0.06
LMNB1-202ENST00000395354 C19orf71A6NCJ1 209 aa14.68□□□□□ -0.06
LMNB1-202ENST00000395354 CHEK1O14757 476 aa14.68□□□□□ -0.06
LMNB1-202ENST00000395354 S100A6P06703 90 aa14.68□□□□□ -0.06
LMNB1-202ENST00000395354 CDX1P47902 265 aaPredicted RBP14.68□□□□□ -0.06
LMNB1-202ENST00000395354 CT83Q5H943 113 aa14.68□□□□□ -0.06
LMNB1-202ENST00000395354 CITED1Q99966 193 aa14.68□□□□□ -0.06
LMNB1-202ENST00000395354 IGHV3-49A0A0A0MS15 119 aa14.67□□□□□ -0.06
LMNB1-202ENST00000395354 IGHV7-4-1A0A0J9YVY3 117 aa14.67□□□□□ -0.06
LMNB1-202ENST00000395354 RBAKDNA6NC62 111 aa14.67□□□□□ -0.06
LMNB1-202ENST00000395354 PHOX2AO14813 284 aa14.67□□□□□ -0.06
LMNB1-202ENST00000395354 LCN12Q6JVE5 192 aa14.67□□□□□ -0.06
LMNB1-202ENST00000395354 UFC1Q9Y3C8 167 aa14.67□□□□□ -0.06
LMNB1-202ENST00000395354 IGHV3OR16-13A0A075B7E8 117 aa14.66□□□□□ -0.06
LMNB1-202ENST00000395354 IGHV3-74A0A0B4J1X5 117 aa14.66□□□□□ -0.06
LMNB1-202ENST00000395354 PRR27Q6MZM9 219 aa14.66□□□□□ -0.06
LMNB1-202ENST00000395354 C18orf65Q6ZTR6 163 aa14.66□□□□□ -0.06
LMNB1-202ENST00000395354 COX8CQ7Z4L0 72 aa14.66□□□□□ -0.06
LMNB1-202ENST00000395354 DAZAP1Q96EP5 407 aaKnown RBP14.66□□□□□ -0.06
LMNB1-202ENST00000395354 A0A1W2PRX2 142 aa14.65□□□□□ -0.06
LMNB1-202ENST00000395354 BMI1P35226 326 aa14.65□□□□□ -0.06
LMNB1-202ENST00000395354 SAPCD1Q5SSQ6 148 aa14.65□□□□□ -0.06
LMNB1-202ENST00000395354 C8orf86Q6ZUL3 223 aa14.65□□□□□ -0.06
LMNB1-202ENST00000395354 OR4B1Q8NGF8 309 aa14.65□□□□□ -0.06
LMNB1-202ENST00000395354 NPIPB6E9PJ23 425 aa14.64□□□□□ -0.07
LMNB1-202ENST00000395354 P01737 135 aa14.64□□□□□ -0.07
LMNB1-202ENST00000395354 COX19Q49B96 90 aa14.64□□□□□ -0.07
LMNB1-202ENST00000395354 ACTL10Q5JWF8 245 aa14.64□□□□□ -0.07
LMNB1-202ENST00000395354 GBGT1Q8N5D6 347 aa14.64□□□□□ -0.07
LMNB1-202ENST00000395354 KLHL30-AS1Q8NEE0 82 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms