RNA–Protein interactions for RNA: ENST00000394925.5

TRAF4-203, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 702 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-203ENST00000394925 LYPD1Q8N2G4 141 aa14.49□□□□□ -0.09
TRAF4-203ENST00000394925 OR10P1Q8NGE3 313 aa14.49□□□□□ -0.09
TRAF4-203ENST00000394925 PTTG2Q9NZH5 202 aa14.49□□□□□ -0.09
TRAF4-203ENST00000394925 TRGV2A0A075B6R0 118 aa14.48□□□□□ -0.09
TRAF4-203ENST00000394925 LINC00854A0A1B0GVQ3 168 aa14.48□□□□□ -0.09
TRAF4-203ENST00000394925 FNDC10F2Z333 226 aa14.48□□□□□ -0.09
TRAF4-203ENST00000394925 EREGO14944 169 aa14.48□□□□□ -0.09
TRAF4-203ENST00000394925 SIVA1O15304 175 aa14.48□□□□□ -0.09
TRAF4-203ENST00000394925 LEPP41159 167 aa14.48□□□□□ -0.09
TRAF4-203ENST00000394925 XGP55808 180 aa14.48□□□□□ -0.09
TRAF4-203ENST00000394925 ZNF546Q86UE3 836 aa14.48□□□□□ -0.09
TRAF4-203ENST00000394925 BCL7BQ9BQE9 202 aa14.48□□□□□ -0.09
TRAF4-203ENST00000394925 PYGO2Q9BRQ0 406 aa14.48□□□□□ -0.09
TRAF4-203ENST00000394925 VPS13BQ7Z7G8 4022 aa14.47□□□□□ -0.09
TRAF4-203ENST00000394925 C9orf170A2RU37 121 aa14.47□□□□□ -0.09
TRAF4-203ENST00000394925 AGPAT2O15120 278 aa14.47□□□□□ -0.09
TRAF4-203ENST00000394925 COX7A2P2O60397 106 aa14.47□□□□□ -0.09
TRAF4-203ENST00000394925 MORN5Q5VZ52 161 aa14.47□□□□□ -0.09
TRAF4-203ENST00000394925 ZNF431Q8TF32 576 aaPredicted RBP14.47□□□□□ -0.09
TRAF4-203ENST00000394925 PXMP4Q9Y6I8 212 aa14.47□□□□□ -0.09
TRAF4-203ENST00000394925 H3BQ15 152 aa14.46□□□□□ -0.09
TRAF4-203ENST00000394925 SCGB1D2O95969 90 aa14.46□□□□□ -0.09
TRAF4-203ENST00000394925 ERVFC1-1P60608 527 aa14.46□□□□□ -0.09
TRAF4-203ENST00000394925 UBE2MP61081 183 aaKnown RBP14.46□□□□□ -0.09
TRAF4-203ENST00000394925 OPCMLQ14982 345 aa14.46□□□□□ -0.09
TRAF4-203ENST00000394925 TMEM37Q8WXS4 190 aa14.46□□□□□ -0.09
TRAF4-203ENST00000394925 GSN-AS1Q9NRJ2 163 aa14.46□□□□□ -0.09
TRAF4-203ENST00000394925 TNFRSF18Q9Y5U5 241 aa14.46□□□□□ -0.09
TRAF4-203ENST00000394925 NXPH4O95158 308 aa14.45□□□□□ -0.1
TRAF4-203ENST00000394925 IGLC2P0DOY2 106 aa14.45□□□□□ -0.1
TRAF4-203ENST00000394925 ARL16Q0P5N6 197 aa14.45□□□□□ -0.1
TRAF4-203ENST00000394925 DEDD2Q8WXF8 326 aa14.45□□□□□ -0.1
TRAF4-203ENST00000394925 SAT2Q96F10 170 aaPredicted RBP14.45□□□□□ -0.1
TRAF4-203ENST00000394925 ODF3Q96PU9 254 aa14.45□□□□□ -0.1
TRAF4-203ENST00000394925 V9GYH0 126 aa14.45□□□□□ -0.1
TRAF4-203ENST00000394925 TRGV1A0A0A0MS02 117 aa14.44□□□□□ -0.1
TRAF4-203ENST00000394925 NPIPB6E9PJ23 425 aa14.44□□□□□ -0.1
TRAF4-203ENST00000394925 H3BMQ9 156 aa14.44□□□□□ -0.1
TRAF4-203ENST00000394925 NOL3O60936 208 aaKnown RBP14.44□□□□□ -0.1
TRAF4-203ENST00000394925 Q5VSD8 79 aa14.44□□□□□ -0.1
TRAF4-203ENST00000394925 C10orf113Q5VZT2 155 aa14.44□□□□□ -0.1
TRAF4-203ENST00000394925 CDPF1Q6NVV7 123 aa14.44□□□□□ -0.1
TRAF4-203ENST00000394925 FUT9Q9Y231 359 aa14.44□□□□□ -0.1
TRAF4-203ENST00000394925 TSC22D2O75157 780 aa14.43□□□□□ -0.1
TRAF4-203ENST00000394925 C11orf72Q8NBR9 251 aa14.43□□□□□ -0.1
TRAF4-203ENST00000394925 FRZBQ92765 325 aa14.43□□□□□ -0.1
TRAF4-203ENST00000394925 C18orf15Q96N68 181 aa14.43□□□□□ -0.1
TRAF4-203ENST00000394925 MGST2Q99735 147 aa14.43□□□□□ -0.1
TRAF4-203ENST00000394925 MYCBP2O75592 4640 aa14.43□□□□□ -0.1
TRAF4-203ENST00000394925 FLG2Q5D862 2391 aaPredicted RBP14.42□□□□□ -0.1
TRAF4-203ENST00000394925 TRAV5A0A0B4J249 113 aa14.42□□□□□ -0.1
TRAF4-203ENST00000394925 SLC25A5P05141 298 aaKnown RBP14.42□□□□□ -0.1
TRAF4-203ENST00000394925 C4orf46Q504U0 113 aa14.42□□□□□ -0.1
TRAF4-203ENST00000394925 ZNF680Q8NEM1 530 aa14.42□□□□□ -0.1
TRAF4-203ENST00000394925 ICOSQ9Y6W8 199 aa14.42□□□□□ -0.1
TRAF4-203ENST00000394925 SRRM2Q9UQ35 2752 aaKnown RBP14.41□□□□□ -0.1
TRAF4-203ENST00000394925 C7orf71A4D174 169 aa14.41□□□□□ -0.1
TRAF4-203ENST00000394925 PAX4O43316 350 aa14.41□□□□□ -0.1
TRAF4-203ENST00000394925 DNAH10OSP0CZ25 163 aa14.41□□□□□ -0.1
TRAF4-203ENST00000394925 TAS2R30P59541 319 aa14.41□□□□□ -0.1
TRAF4-203ENST00000394925 KRTAP10-1P60331 282 aa14.41□□□□□ -0.1
TRAF4-203ENST00000394925 ERCC8Q13216 396 aa14.41□□□□□ -0.1
TRAF4-203ENST00000394925 IAH1Q2TAA2 248 aaPredicted RBP14.41□□□□□ -0.1
TRAF4-203ENST00000394925 GGACTQ9BVM4 153 aa14.41□□□□□ -0.1
TRAF4-203ENST00000394925 DNAJC4Q9NNZ3 241 aa14.41□□□□□ -0.1
TRAF4-203ENST00000394925 GSKIPQ9P0R6 139 aa14.41□□□□□ -0.1
TRAF4-203ENST00000394925 FLVCR2Q9UPI3 526 aa14.41□□□□□ -0.1
TRAF4-203ENST00000394925 RCL1Q9Y2P8 373 aaKnown RBP14.41□□□□□ -0.1
TRAF4-203ENST00000394925 ZNF324O75467 553 aaPredicted RBP14.4□□□□□ -0.1
TRAF4-203ENST00000394925 IFNA5P01569 189 aa14.4□□□□□ -0.1
TRAF4-203ENST00000394925 GUK1Q16774 197 aa14.4□□□□□ -0.1
TRAF4-203ENST00000394925 KLF12Q9Y4X4 402 aa14.4□□□□□ -0.1
TRAF4-203ENST00000394925 SPINK4O60575 86 aa14.39□□□□□ -0.11
TRAF4-203ENST00000394925 IGHV3-53P01767 116 aa14.39□□□□□ -0.11
TRAF4-203ENST00000394925 OR4E1P0C645 316 aa14.39□□□□□ -0.11
TRAF4-203ENST00000394925 CD300CQ08708 224 aa14.39□□□□□ -0.11
TRAF4-203ENST00000394925 BTN1A1Q13410 526 aa14.39□□□□□ -0.11
TRAF4-203ENST00000394925 NFE4Q86UQ8 179 aa14.39□□□□□ -0.11
TRAF4-203ENST00000394925 EIF4E3Q8N5X7 224 aaKnown RBP14.39□□□□□ -0.11
TRAF4-203ENST00000394925 A0A087WTM6 91 aa14.38□□□□□ -0.11
TRAF4-203ENST00000394925 C7orf66A4D0T2 115 aa14.38□□□□□ -0.11
TRAF4-203ENST00000394925 M0R3E3 92 aa14.38□□□□□ -0.11
TRAF4-203ENST00000394925 NDUFB6O95139 128 aa14.38□□□□□ -0.11
TRAF4-203ENST00000394925 CAMLGP49069 296 aa14.38□□□□□ -0.11
TRAF4-203ENST00000394925 ANXA2RQ3ZCQ2 193 aa14.38□□□□□ -0.11
TRAF4-203ENST00000394925 Q6ZRG5 221 aa14.38□□□□□ -0.11
TRAF4-203ENST00000394925 KLLNB2CW77 178 aa14.37□□□□□ -0.11
TRAF4-203ENST00000394925 SMR3BP02814 79 aaPredicted RBP14.37□□□□□ -0.11
TRAF4-203ENST00000394925 S100A5P33763 92 aa14.37□□□□□ -0.11
TRAF4-203ENST00000394925 RNASE4P34096 147 aaKnown RBP14.37□□□□□ -0.11
TRAF4-203ENST00000394925 TCL1AP56279 114 aa14.37□□□□□ -0.11
TRAF4-203ENST00000394925 MIC13Q5XKP0 118 aa14.37□□□□□ -0.11
TRAF4-203ENST00000394925 LYPD5Q6UWN5 251 aa14.37□□□□□ -0.11
TRAF4-203ENST00000394925 NRARPQ7Z6K4 114 aa14.37□□□□□ -0.11
TRAF4-203ENST00000394925 ST6GAL2Q96JF0 529 aa14.37□□□□□ -0.11
TRAF4-203ENST00000394925 LINC00467Q9BRT7 94 aa14.37□□□□□ -0.11
TRAF4-203ENST00000394925 MBPP02686 304 aaPredicted RBP14.36□□□□□ -0.11
TRAF4-203ENST00000394925 RAB31Q13636 194 aa14.36□□□□□ -0.11
TRAF4-203ENST00000394925 OR1L4Q8NGR5 311 aa14.36□□□□□ -0.11
TRAF4-203ENST00000394925 MRPL16Q9NX20 251 aaKnown RBP14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms