RNA–Protein interactions for RNA: ENST00000394872.6

COL4A6-203, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5 BASIC

Gene COL4A6, Length 6,750 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-203ENST00000394872 PRSS33Q8NF86 280 aa8.35□□□□□ -1.07
COL4A6-203ENST00000394872 REG4Q9BYZ8 158 aa8.35□□□□□ -1.07
COL4A6-203ENST00000394872 GAGE12BA1L429 117 aa8.35□□□□□ -1.07
COL4A6-203ENST00000394872 EREGO14944 169 aa8.35□□□□□ -1.07
COL4A6-203ENST00000394872 GAGE7O76087 117 aa8.35□□□□□ -1.07
COL4A6-203ENST00000394872 GAGE12FP0CL80 117 aa8.35□□□□□ -1.07
COL4A6-203ENST00000394872 GAGE12GP0CL81 117 aa8.35□□□□□ -1.07
COL4A6-203ENST00000394872 GAGE12IP0CL82 117 aa8.35□□□□□ -1.07
COL4A6-203ENST00000394872 DUX4L9Q6RFH8 374 aaPredicted RBP8.35□□□□□ -1.07
COL4A6-203ENST00000394872 TMEM75Q8N9X5 138 aa8.35□□□□□ -1.07
COL4A6-203ENST00000394872 OVOL2Q9BRP0 275 aa8.35□□□□□ -1.07
COL4A6-203ENST00000394872 MPDZO75970 2070 aa8.35□□□□□ -1.07
COL4A6-203ENST00000394872 PAX9P55771 341 aa8.34□□□□□ -1.07
COL4A6-203ENST00000394872 NBL1P41271 181 aa8.34□□□□□ -1.07
COL4A6-203ENST00000394872 YPEL3P61236 119 aaPredicted RBP8.34□□□□□ -1.07
COL4A6-203ENST00000394872 Q6ZRM9 215 aa8.34□□□□□ -1.07
COL4A6-203ENST00000394872 ZMAT4Q9H898 229 aa8.34□□□□□ -1.07
COL4A6-203ENST00000394872 Q6ZR03 302 aa8.34□□□□□ -1.07
COL4A6-203ENST00000394872 KLF12Q9Y4X4 402 aa8.34□□□□□ -1.07
COL4A6-203ENST00000394872 RHODO00212 210 aa8.34□□□□□ -1.07
COL4A6-203ENST00000394872 ANAPC10Q9UM13 185 aa8.34□□□□□ -1.07
COL4A6-203ENST00000394872 GAGE2EQ4V326 116 aa8.34□□□□□ -1.08
COL4A6-203ENST00000394872 C2orf82Q6UX34 121 aa8.34□□□□□ -1.08
COL4A6-203ENST00000394872 LINC00479Q96M42 142 aa8.34□□□□□ -1.08
COL4A6-203ENST00000394872 PROK2Q9HC23 129 aa8.34□□□□□ -1.08
COL4A6-203ENST00000394872 NDUFA4L2Q9NRX3 87 aa8.34□□□□□ -1.08
COL4A6-203ENST00000394872 TMEM14BQ9NUH8 114 aa8.34□□□□□ -1.08
COL4A6-203ENST00000394872 GAGE2DQ9UEU5 116 aa8.34□□□□□ -1.08
COL4A6-203ENST00000394872 MYO7BQ6PIF6 2116 aa8.33□□□□□ -1.08
COL4A6-203ENST00000394872 GAGE2BQ13066 116 aa8.33□□□□□ -1.08
COL4A6-203ENST00000394872 C17orf58Q2M2W7 97 aa8.33□□□□□ -1.08
COL4A6-203ENST00000394872 ZNF625Q96I27 306 aaPredicted RBP8.33□□□□□ -1.08
COL4A6-203ENST00000394872 NAA38Q9BRA0 125 aaKnown RBP8.33□□□□□ -1.08
COL4A6-203ENST00000394872 GFRA4Q9GZZ7 299 aa8.33□□□□□ -1.08
COL4A6-203ENST00000394872 CACNA1DQ01668 2161 aa8.33□□□□□ -1.08
COL4A6-203ENST00000394872 VWC2LB2RUY7 222 aa8.33□□□□□ -1.08
COL4A6-203ENST00000394872 NDUFA4O00483 81 aa8.33□□□□□ -1.08
COL4A6-203ENST00000394872 TNFRSF6BO95407 300 aa8.33□□□□□ -1.08
COL4A6-203ENST00000394872 LOXP28300 417 aaPredicted RBP8.33□□□□□ -1.08
COL4A6-203ENST00000394872 TRAV12-2A0A075B6T6 113 aa8.33□□□□□ -1.08
COL4A6-203ENST00000394872 FAM120AOSQ5T036 256 aa8.33□□□□□ -1.08
COL4A6-203ENST00000394872 C8orf86Q6ZUL3 223 aa8.33□□□□□ -1.08
COL4A6-203ENST00000394872 ESDP10768 282 aa8.33□□□□□ -1.08
COL4A6-203ENST00000394872 LMO1P25800 156 aa8.33□□□□□ -1.08
COL4A6-203ENST00000394872 MRAPQ8TCY5 172 aa8.33□□□□□ -1.08
COL4A6-203ENST00000394872 LRRK1Q38SD2 2015 aa8.33□□□□□ -1.08
COL4A6-203ENST00000394872 IGHV1OR15-1A0A075B7D0 117 aa8.32□□□□□ -1.08
COL4A6-203ENST00000394872 TRAV8-3A0A0A6YYJ7 113 aa8.32□□□□□ -1.08
COL4A6-203ENST00000394872 COLCA2A8K830 154 aa8.32□□□□□ -1.08
COL4A6-203ENST00000394872 SYS1-DBNDD2H3BUS1 97 aa8.32□□□□□ -1.08
COL4A6-203ENST00000394872 A0A087X0K7 114 aa8.32□□□□□ -1.08
COL4A6-203ENST00000394872 TMEM256Q8N2U0 113 aa8.32□□□□□ -1.08
COL4A6-203ENST00000394872 PFN1P07737 140 aaKnown RBP8.32□□□□□ -1.08
COL4A6-203ENST00000394872 HAPLN4Q86UW8 402 aa8.32□□□□□ -1.08
COL4A6-203ENST00000394872 DNAJC30Q96LL9 226 aa8.32□□□□□ -1.08
COL4A6-203ENST00000394872 IGKV1-6A0A0C4DH72 117 aa8.32□□□□□ -1.08
COL4A6-203ENST00000394872 TEX36Q5VZQ5 186 aa8.32□□□□□ -1.08
COL4A6-203ENST00000394872 NKAPP1Q8N9T2 125 aa8.32□□□□□ -1.08
COL4A6-203ENST00000394872 MRPL27Q9P0M9 148 aaKnown RBP8.32□□□□□ -1.08
COL4A6-203ENST00000394872 GTSF1LQ9H1H1 148 aa8.32□□□□□ -1.08
COL4A6-203ENST00000394872 I3L3M4 83 aa8.31□□□□□ -1.08
COL4A6-203ENST00000394872 CGB7P0DN87 165 aa8.31□□□□□ -1.08
COL4A6-203ENST00000394872 THAP8Q8NA92 274 aa8.31□□□□□ -1.08
COL4A6-203ENST00000394872 TP53TG1Q9Y2A0 90 aa8.31□□□□□ -1.08
COL4A6-203ENST00000394872 RPL32P62910 135 aaKnown RBP8.31□□□□□ -1.08
COL4A6-203ENST00000394872 GAGE6Q13070 117 aa8.31□□□□□ -1.08
COL4A6-203ENST00000394872 DLX4Q92988 240 aaPredicted RBP8.31□□□□□ -1.08
COL4A6-203ENST00000394872 ZNF48Q96MX3 618 aaPredicted RBP8.31□□□□□ -1.08
COL4A6-203ENST00000394872 TMEM213A2RRL7 107 aa8.31□□□□□ -1.08
COL4A6-203ENST00000394872 C3orf79P0CE67 100 aa8.31□□□□□ -1.08
COL4A6-203ENST00000394872 ZC2HC1BQ5TFG8 222 aa8.31□□□□□ -1.08
COL4A6-203ENST00000394872 WDR86Q86TI4 376 aa8.31□□□□□ -1.08
COL4A6-203ENST00000394872 PHF3Q92576 2039 aaKnown RBP8.31□□□□□ -1.08
COL4A6-203ENST00000394872 IGLV3-9A0A075B6K5 115 aa8.31□□□□□ -1.08
COL4A6-203ENST00000394872 CDKN1BP46527 198 aa8.31□□□□□ -1.08
COL4A6-203ENST00000394872 PMVKQ15126 192 aa8.31□□□□□ -1.08
COL4A6-203ENST00000394872 C1orf194Q5T5A4 169 aa8.31□□□□□ -1.08
COL4A6-203ENST00000394872 PIP4P1Q86T03 277 aa8.31□□□□□ -1.08
COL4A6-203ENST00000394872 LYL1P12980 280 aa8.3□□□□□ -1.08
COL4A6-203ENST00000394872 ZNRF2Q8NHG8 242 aa8.3□□□□□ -1.08
COL4A6-203ENST00000394872 IGHV3-38A0A0C4DH36 116 aa8.3□□□□□ -1.08
COL4A6-203ENST00000394872 ZNF503-AS2A6NEH8 195 aa8.3□□□□□ -1.08
COL4A6-203ENST00000394872 RMI2Q96E14 147 aa8.3□□□□□ -1.08
COL4A6-203ENST00000394872 FAM215AQ9Y5M1 114 aa8.3□□□□□ -1.08
COL4A6-203ENST00000394872 VWC2Q2TAL6 325 aa8.3□□□□□ -1.08
COL4A6-203ENST00000394872 KIAA1671Q9BY89 1806 aa8.3□□□□□ -1.08
COL4A6-203ENST00000394872 A0A096LPF7 62 aa8.3□□□□□ -1.08
COL4A6-203ENST00000394872 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.3□□□□□ -1.08
COL4A6-203ENST00000394872 FHL1Q13642 323 aa8.3□□□□□ -1.08
COL4A6-203ENST00000394872 TMEM243Q9BU79 118 aa8.3□□□□□ -1.08
COL4A6-203ENST00000394872 FANCMQ8IYD8 2048 aa8.3□□□□□ -1.08
COL4A6-203ENST00000394872 MED12Q93074 2177 aa8.3□□□□□ -1.08
COL4A6-203ENST00000394872 TRBV19A0A075B6N1 114 aa8.3□□□□□ -1.08
COL4A6-203ENST00000394872 TPSG1Q9NRR2 321 aa8.3□□□□□ -1.08
COL4A6-203ENST00000394872 WDR81Q562E7 1941 aa8.29□□□□□ -1.08
COL4A6-203ENST00000394872 PRSS46E5RG02 174 aa8.29□□□□□ -1.08
COL4A6-203ENST00000394872 IGLV1-44P01699 117 aa8.29□□□□□ -1.08
COL4A6-203ENST00000394872 ANXA2RQ3ZCQ2 193 aa8.29□□□□□ -1.08
COL4A6-203ENST00000394872 ZNF114Q8NC26 417 aa8.29□□□□□ -1.08
COL4A6-203ENST00000394872 IGF2BP2-AS1Q96M15 143 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 132.6 ms